Register | Log in | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

sobolevnrm's Yu [42 articles]

Recent papers posted to sobolevnrm's library by the author Yu. You can also see everyone's Yu.
  • Density functional study on the structural and thermodynamic properties of aqueous DNA-electrolyte solution in the framework of cell model
    The Journal of Chemical Physics, Vol. 128, No. 18. (2008)
    by Ke Wang, Yang X Yu, Guang H Gao
    posted to beyondmeanfield electrostatics statisticalmechanics by sobolevnrm on 2008-08-29 13:42:07 as **
  • notes Density functional study on the structures and thermodynamic properties of small ions around polyanionic DNA
    Physical Review E, Vol. 70, No. 1. (2004)
    by K Wang, Yu, Gao
    posted to beyondmeanfield electrostatics statisticalmechanics by sobolevnrm on 2008-08-29 13:41:59 as **
  • Local spectral time splitting method for first- and second-order partial differential equations
    Journal of Computational Physics, Vol. 206, No. 2. (1 July 2005), pp. 727-780.
    by Sining Yu, Shan Zhao, GW Wei
    posted to kinetics mathematics molecular_dynamics by sobolevnrm on 2008-07-01 03:10:54 as read along with 1 group baker-group
  • Matched interface and boundary (MIB) method for elliptic problems with sharp-edged interfaces
    Journal of Computational Physics, Vol. 224, No. 2. (10 June 2007), pp. 729-756.
    by Sining Yu, Yongcheng Zhou, GW Wei
    posted to electrostatics mathematics solvation by sobolevnrm on 2008-07-01 02:31:14 as read along with 1 group baker-group
  • Density functional study on the structural and thermodynamic properties of aqueous DNA-electrolyte solution in the framework of cell model
    The Journal of Chemical Physics, Vol. 128, No. 18. (2008)
    by Ke Wang, Yang X Yu, Guang H Gao
    posted to electrostatics statistical_mechanics by sobolevnrm on 2008-06-26 11:56:45 as read along with 1 group baker-group
  • Feature-preserving adaptive mesh generation for molecular shape modeling and simulation
    Journal of Molecular Graphics and Modelling, Vol. In Press, Corrected Proof
    by Zeyun Yu, Michael J Holst, Yuhui Cheng, Mccammon
    posted to mathematics visualization by sobolevnrm on 2008-04-24 15:11:15 as read along with 1 group baker-group
  • Protein Sequence- and pH-Dependent Hydration Probed by Terahertz Spectroscopy
    J. Am. Chem. Soc., Vol. 130, No. 8. (27 February 2008), pp. 2374-2375.
    by S Ebbinghaus, SJ Kim, M Heyden, X Yu, M Gruebele, DM Leitner, M Havenith
    posted to kinetics protein_folding solvation by sobolevnrm on 2008-03-03 11:46:31 as read along with 1 group baker-group
  • High-resolution MRI characterization of human thrombus using a novel fibrin-targeted paramagnetic nanoparticle contrast agent
    Magnetic Resonance in Medicine, Vol. 44, No. 6. (2000), pp. 867-872.
    by Xin Yu, Sheng-Kwei Song, Junjie Chen, Michael J Scott, Ralph J Fuhrhop, Christopher S Hall, Patrick J Gaffney, Samuel A Wickline, Gregory M Lanza
    posted to emulsions imaging nanotech sccne by sobolevnrm on 2008-02-21 12:28:24 as read along with 1 group baker-group
  • An extended dynamical hydration shell around proteins.
    Proc Natl Acad Sci U S A, Vol. 104, No. 52. (26 December 2007), pp. 20749-20752.
    by S Ebbinghaus, SJ Kim, M Heyden, X Yu, U Heugen, M Gruebele, DM Leitner, M Havenith
    posted to diffusion experimental_methodology kinetics molecular_dynamics solvation by sobolevnrm on 2008-01-31 12:59:41 as read along with 1 person and 1 group choonpeng baker-group
  • An improved thermodynamic perturbation theory for Mercedes-Benz water
    The Journal of Chemical Physics, Vol. 127, No. 17. (2007)
    by T Urbic, V Vlachy, Yu, KA Dill
    posted to solvation statistical_mechanics by sobolevnrm on 2007-12-17 12:56:17 as read along with 1 group baker-group
  • The partition of cholesterol between ordered and fluid bilayers of phosphatidylcholine: A synchrotron X-ray diffraction study
    Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1768, No. 11. (2007), pp. 2873-2881.
    by Lin Chen, Zhiwu Yu, Peter J Quinn
    posted to biomembranes oxysterols by sobolevnrm on 2007-11-14 13:23:36 as read
  • Treatment of charge singularities in implicit solvent models
    The Journal of Chemical Physics, Vol. 127, No. 11. (2007)
    by Weihua Geng, Sining Yu, Guowei Wei
    posted to electrostatics mathematics solvation by sobolevnrm on 2007-09-25 12:45:23 as read along with 1 group baker-group
  • How Directional Translocation is Regulated in a DNA Helicase Motor
    Biophys. J. (17 August 2007), biophysj.107.109546.
    by Jin Yu, Taekjip Ha, Klaus Schulten
    posted to allostery helicase quasiharmonic-models_elastic-network_gnm_nma_pca_etc correlatedmutations by sobolevnrm on 2007-08-26 19:58:10 as read along with 1 group baker-group
  • Three-dimensional matched interface and boundary (MIB) method for treating geometric singularities
    Journal of Computational Physics, Vol. In Press, Accepted Manuscript
    by Sining Yu, GW Wei
    posted to electrostatics mathematics by sobolevnrm on 2007-08-24 13:02:53 as read along with 1 group baker-group
  • Treatment of geometric singularities in implicit solvent models
    Journal of Chemical Physics, Vol. 126 (2007)
    by S Yu, W Geng, GW Wei
    posted to mathematics solvation by sobolevnrm on 2007-07-07 23:53:48 as read along with 1 group baker-group
  • Preferential interaction between DNA and small ions in mixed-size counterion systems: Monte Carlo simulation and density functional study
    Journal of Chemical Physics, Vol. 126 (2007)
    by K Wang, YX Yu, GH Gao, GS Luo
    posted to electrostatics nucleic_acids by sobolevnrm on 2007-05-25 14:37:07 as read along with 1 group baker-group
  • Approximate Analytical Expressions for the Electrical Potential between Two Planar, Cylindrical, and Spherical Surfaces
    Journal of Physical Chemistry B (in press)
    by JP Hsu, HY Yu, S Tseng
    posted to electrostatics by sobolevnrm on 2007-05-25 14:24:57 as read along with 1 group baker-group
  • Solute-induced retardation of water dynamics probed directly by terahertz spectroscopy
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 33. (2006), pp. 12301-6.
    by U Huegen, G Schwaab, E Brã¼ndermann, M Heyden, CH Yu, DM Leitner, M Havenith
    posted to solvation by sobolevnrm on 2007-05-25 14:23:18 as read along with 1 group baker-group
  • Structure-based Model of the Stepping Motor of PcrA Helicase
    Biophysical Journal, Vol. 91, No. 6. (2006), pp. 2097-114.
    by J Yu, T Ha, K Schulten
    posted to helicase molecular_dynamics by sobolevnrm on 2007-05-25 14:23:17 as read along with 1 group baker-group
  • Electrostatics of charged dielectric spheres with application to biological systems
    Physical Review E, Vol. 73 (2006)
    by TP Doerr, YK Yu
    posted to electrostatics by sobolevnrm on 2007-05-25 14:23:17 as read along with 1 group baker-group
  • Curvature-Modulated Phase Separation in Lipid Bilayer Membranes
    Langmuir, Vol. 22, No. 11. (2006), pp. 5095-99.
    by R Parthasarathy, CH Yu, JT Groves
    posted to biomembranes by sobolevnrm on 2007-05-25 14:22:46 as read along with 1 group baker-group
  • Targeted Antiproliferative Drug Delivery to Vascular Smooth Muscle Cells With a Magnetic Resonance Imaging Nanoparticle Contrast Agent
    Circulation, Vol. 106, No. 22. (2002)
    by GM Lanza, X Yu, PM Winter, DR Abendschein, KK Karukstis, MJ Scott, LK Chinen, RW Fuhrhop, DE Scherrer, SA Wickline
    posted to emulsions nanotech drugdesign by sobolevnrm on 2007-05-25 14:22:45 as read along with 1 group baker-group
  • What role do surfaces play in GB models? A new-generation of surface-generalized born model based on a novel gaussian surface for biomolecules
    Journal of Computational Chemistry, Vol. 27, No. 1. (2005), pp. 72-89.
    by Z Yu, MP Jacobson, RA Friesner
    posted to electrostatics solvation by sobolevnrm on 2007-05-25 14:19:03 as read along with 1 group baker-group
  • Heat flow in proteins: Computation of thermal transport coefficients
    Journal of Chemical Physics, Vol. 122 (2005)
    by X Yu, DM Leitner
    posted to allostery statistical_mechanics by sobolevnrm on 2007-05-25 14:15:19 as read along with 1 group baker-group
  • Kinetics of Filament Bundling with Attractive Interactions
    Biophysical Journal, Vol. 87, No. 6. (2004), pp. 3679-89.
    by X Yu, AE Carlsson
    posted to protein-protein_interactions by sobolevnrm on 2007-05-25 14:14:07 as read along with 1 group baker-group
  • Electrophoresis of a charge-regulated particle at an arbitrary position in a spherical cavity
    Colloid and Polymer Science, Vol. 283, No. 1. (2004), pp. 10-4.
    by HY Yu, SH Hung, JP Hsu
    posted to diffusion electrostatics by sobolevnrm on 2007-05-25 14:14:06 as read along with 1 group baker-group
  • Density functional study on the structures and thermodynamic properties of small ions around polyanionic DNA
    Physical Review E, Vol. 70, No. 1. (2004)
    by K Wang, YX Yu, GH Gao
    posted to electrostatics statistical_mechanics by sobolevnrm on 2007-05-25 14:13:08 as read along with 1 group baker-group
  • First-Shell Solvation of Ion Pairs: Correction of Systematic Errors in Implicit Solvent Models
    Journal of Physical Chemistry B, Vol. 108, No. 21. (2004), pp. 6643-54.
    by Z Yu, MP Jacobson, J Josovitz, CS Rapp, RA Friesner
    posted to electrostatics solvation by sobolevnrm on 2007-05-25 14:09:31 as read along with 1 group baker-group
  • Molecular basis for the Born model of ion solvation
    Journal of Physical Chemistry, Vol. 94, No. 11. (1990), pp. 4683-4688.
    by B Roux, HA Yu, M Karplus
    posted to electrostatics solvation by sobolevnrm on 2007-05-25 14:06:49 as read along with 1 group baker-group
  • Role of Residue 138 in the Interdomain Hinge Region in Transmitting Allosteric Signals for DNA Binding in Escherichia coli cAMP Receptor Protein
    Biochemistry, Vol. 43, No. 16. (2004), pp. 4662-4669.
    by S Yu, JC Lee
    posted to allostery by sobolevnrm on 2007-05-25 14:06:49 as read along with 1 group baker-group
  • Slowdown of water diffusion around protein in aqueous solution with ectoine
    Chemical Physics Letters, Vol. 388, No. 4-6. (2004), pp. 316-321.
    by I Yu, M Nagaoka
    posted to solvation by sobolevnrm on 2007-05-25 14:06:14 as read along with 1 group baker-group
  • Density-functional theory of spherical electric double layers and zeta potentials of colloidal particles in restricted-primitive-model electrolyte solutions
    Journal of Chemical Physics, Vol. 120, No. 15. (2004), pp. 7223-7233.
    by YX Yu, J Wu, GH Gao
    posted to electrostatics by sobolevnrm on 2007-05-25 14:05:39 as read along with 1 group baker-group
  • The Mad2 spindle checkpoint protein has two distinct natively folded states
    Nature Structural & Molecular Biology, Vol. 11 (2004), pp. 338-345.
    by X Luo, Z Tang, G Xia, K Wassman, T Matsumoto, J Rizo, H Yu
    posted to allostery by sobolevnrm on 2007-05-25 14:05:39 as read along with 1 group baker-group
  • The compositional adjustment of amino acid substitution matrices
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 26. (2003), pp. 15688-15693.
    by YK Yu, JC Wootton, SF Altschul
    posted to bioinformatics by sobolevnrm on 2007-05-25 14:02:10 as read along with 1 group baker-group
  • Multiscale Study of Counterion-Induced Attraction and Bundle Formation of F-Actin Using an Ising-like Mean-Field Model
    Biophysical Journal, Vol. 85, No. 6. (2003), pp. 3532-3543.
    by X Yu, AE Carlsson
    posted to electrostatics by sobolevnrm on 2007-05-25 14:01:00 as read along with 1 group baker-group
  • Vibrational energy transfer and heat conduction in a protein
    Journal of Physical Chemistry B, Vol. 107, No. 7. (2003), pp. 1698-1707.
    by X Yu, DM Leitner
    posted to allostery molecular_dynamics quasiharmonic-models_elastic-network_gnm_nma_pca_etc by sobolevnrm on 2007-05-25 13:57:46 as read along with 1 group baker-group
  • Anomalous diffusion of vibrational energy in proteins
    Journal of Chemical Physics, Vol. 119, No. 23. (2003), pp. 12673-12679.
    by X Yu, DM Leitner
    posted to allostery molecular_dynamics quasiharmonic-models_elastic-network_gnm_nma_pca_etc by sobolevnrm on 2007-05-25 13:57:46 as read along with 1 group baker-group
  • Anisotropic vector diffusion in image smoothing; 9th IEEE International Conference on Image Processing
    Vol. 1 (2002), pp. 828-831.
    by Z Yu, C Bajaj
    posted to experimental_methodology mathematics visualization by sobolevnrm on 2007-05-25 13:56:19 as read along with 1 group baker-group
  • Image segmentation using gradient vector diffusion and region merging; 16th International Conference on Pattern Recognition
    Vol. 2 (2002), pp. 941-944.
    by Z Yu, C Bajaj
    posted to experimental_methodology by sobolevnrm on 2007-05-25 13:55:43 as read along with 1 group baker-group
  • Normalized gradient vector diffusion and image separation; 7th European Conference on Computer Vision (LNCS 2352)
    Vol. 3 (2002), pp. 517-530.
    by Z Yu, C Bajaj
    posted to visualization by sobolevnrm on 2007-05-25 13:55:43 as read along with 1 group baker-group
  • Volumetric feature extraction and visualization of tomographic molecular imaging
    Journal of Structural Biology, Vol. 144, No. 1-2. (2003), pp. 132-143.
    by C Bajaj, Z Yu, M Auer
    posted to mathematics visualization by sobolevnrm on 2007-05-25 13:55:43 as read along with 1 group baker-group
  • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    Science, Vol. 296, No. 5565. (2002), pp. 92-100.
    by SA Goff, D Ricke, TH Lan, G Presting, R Wang, M Dunn, J Glazebrook, A Sessions, P Oeller, H Varma, D Hadley, D Hutchison, C Martin, F Katagiri, BM Lange, T Moughamer, Y Xia, P Budworth, J Zhong, T Miguel, U Paszkowski, S Zhang, M Colbert, WL Sun, L Chen, B Cooper, S Park, TC Wood, L Mao, P Quail, R Wing, R Dean, Y Yu, A Zharkikh, R Shen, S Sahasrabudhe, A Thomas, R Cannings, A Gutin, D Pruss, J Reid, S Tavtigian, J Mitchell, G Eldredge, T Scholl, RM Miller, S Bhatnagar, N Adey, T Rubano, N Tusneem, R Robinson, J Feldhaus, T Macalma, A Oliphant, S Briggs
    posted to biologicalsystems by sobolevnrm on 2007-05-25 13:53:56 as read along with 1 group baker-group
    • Note: You may cite this page as: http://www.citeulike.org/user/sobolevnrm/author/Yu

    RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.