sobolevnrm's diffusion [at least 200 articles] Export Sort

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	Revival of High-Order Fluorescence Correlation Analysis: Generalized Theory and Biochemical Applications [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 47. (26 November 2009), pp. 15629-15638. by Artem V. Melnykov, Kathleen B. Hall posted to kinetics experimental_methodology diffusion by sobolevnrm on 2009-12-23 23:10:23 as
	Visualization of the Encounter Ensemble of the Transient Electron Transfer Complex of Cytochrome c and Cytochrome c Peroxidase [My Copy] Journal of the American Chemical Society, Vol. 0, No. 0. (0000) by Qamar Bashir, Alexander N. Volkov, G. Matthias Ullmann, Marcellus Ubbink posted to protein-protein_interactions diffusion by sobolevnrm on 2009-12-12 21:49:14 as
	Algorithm for rigid-body Brownian dynamics [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 80, No. 6. (2009), 066703. by Dan Gordon, Matthew Hoyles, Shin H. Chung posted to molecular_dynamics hydrodynamics diffusion by sobolevnrm on 2009-12-12 00:24:21 as
	Study on the Correlation between Lateral Diffusion Effect and Effective Charge in Neutral Liposomes [My Copy] Langmuir by Elisa G. Cortés, de Dios Solier, Joan Estelrich, Roque H. Álvarez posted to solvation electrostatics diffusion biomembranes by sobolevnrm on 2009-11-04 19:05:45 as
	A diffusional bimolecular propensity function [My Copy] The Journal of Chemical Physics, Vol. 131, No. 16. (Jan 2009) by Daniel T. Gillespie posted to kinetics diffusion by sobolevnrm on 2009-11-02 12:47:50 as
	Remarks on Drift Estimation for Diffusion Processes [My Copy] Multiscale Modeling, Vol. 8, No. 1. (Jan 2009), pp. 69-95. by Yvo Pokern, Andrew M. Stuart, Eric V. Eijnden posted to statistics molecular-dynamics mathematics diffusion by sobolevnrm on 2009-11-02 12:47:50 as
	SSB protein diffusion on single-stranded DNA stimulates RecA filament formation [My Copy] Nature, Vol. 461, No. 7267. (Oct 2009), pp. 1092-7. by Rahul Roy, Alexander G. Kozlov, Timothy M. Lohman, Taekjip Ha posted to protein-nucleic-acid-interactions kinetics diffusion by sobolevnrm on 2009-11-02 12:47:49 as
	Electric and electrophoretic inversion of the DNA charge in multivalent electrolytes [My Copy] Soft Matter (Jan 2010) by Binquan Luan, Aleksei Aksimentiev posted to beyond_mean_field nucleic-acids electrostatics diffusion by sobolevnrm on 2009-11-02 12:47:49 as
	A Finite Element Method for Elliptic Equations on Surfaces [My Copy] SIAM Journal on Numerical Analysis, Vol. 47, No. 5. (Jan 2009), pp. 3339-3358. by Maxim A. Olshanskii, Arnold Reusken, Jorg Grande posted to finite_element mathematics diffusion by sobolevnrm on 2009-11-02 12:47:49 as
	Progress and challenges in the automated construction of Markov state models for full protein systems [My Copy] J. Chem. Phys., Vol. 131, No. 12. (Sep 2009) by Gregory R. Bowman, Kyle A. Beauchamp, George Boxer, Vijay S. Pande posted to statistics molecular-dynamics kinetics diffusion by sobolevnrm on 2009-10-31 21:00:31 as
	How Subdiffusion Changes the Kinetics of Binding to a Surface [My Copy] Vol. 97, No. 3. (5 August 2009), pp. 710-721. by Irwin M. Zaid, Michael A. Lomholt, Ralf Metzler posted to kinetics diffusion biomembranes by sobolevnrm on 2009-10-16 13:35:46 as along with 1 person coombs
	Enzymatic Activity versus Structural Dynamics: The Case of Acetylcholinesterase Tetramer [My Copy] Vol. 97, No. 3. (5 August 2009), pp. 897-905. by Alemayehu A. Gorfe, Benzhuo Lu, Zeyun Yu, J. Andrew McCammon posted to molecular_dynamics kinetics diffusion acetylcholinesterase by sobolevnrm on 2009-10-14 12:33:57 as along with 1 person anuragsethi
	Determining the Local Shear Viscosity of a Lipid Bilayer System by Reverse Non-Equilibrium Molecular Dynamics Simulations [My Copy] ChemPhysChem, Vol. 10, No. 13. (2009), pp. 2305-2315. by Thomas J. Müller, Florian Müller-Plathe posted to molecular_simulation diffusion biomembranes by sobolevnrm on 2009-09-24 12:36:20 as along with 1 person paulschlesinger
	Modeling Membrane Deformations and Lipid Demixing upon Protein-Membrane Interaction: The BAR Dimer Adsorption [My Copy] Biophysical Journal, Vol. 97, No. 6. (16 September 2009), pp. 1626-1635. by George Khelashvili, Daniel Harries, Harel Weinstein posted to protein-membrane_interactions diffusion biomembranes by sobolevnrm on 2009-09-24 12:35:44 as along with 2 people dsmueller loison
	The probability of an encounter of two Brownian particles before escape [My Copy] Journal of Physics A: Mathematical and Theoretical, Vol. 42, No. 31. (2009), 315210. by D. Holcman, I. Kupka posted to statistical_mechanics mathematics kinetics diffusion by sobolevnrm on 2009-08-19 12:54:57 as
	Graph-theoretical identification of dissociation pathways on free energy landscapes of biomolecular interaction [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2009), NA. by Ling Wang, Boris Stumm, Volkhard Helms posted to kinetics graph_theory diffusion by sobolevnrm on 2009-08-19 12:54:40 as along with 2 people and 1 group anuragsethi barry McCammon
	Computing generalized Langevin equations and generalized Fokker–Planck equations [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 27. (7 July 2009), pp. 10884-10889. by Eric Darve, Jose Solomon, Amirali Kia posted to diffusion mathematics by sobolevnrm on 2009-08-10 13:01:27 as along with 2 people chiufanlee jjray
	An inverse problem for a heat equation with piecewise-constant thermal conductivity [My Copy] Journal of Mathematical Physics, Vol. 50, No. 6. (2009), 063512. by N. S. Hoang, A. G. Ramm posted to diffusion electrostatics mathematics by sobolevnrm on 2009-07-17 12:52:49 as
	Diffusion with Moving Boundary on Spherical Surfaces [My Copy] ChemPhysChem, Vol. 10, No. 9-10. (2009), pp. 1593-1602. by Christian Amatore, Oleksiy V. Klymenko, Alexander I. Oleinick, Irina Svir posted to diffusion by sobolevnrm on 2009-06-26 12:55:44 as along with 2 people dlimmer paulschlesinger
	Diffusion on a Sphere with Localized Traps: Mean First Passage Time, Eigenvalue Asymptotics, and Fekete Points [My Copy] SIAM Journal on Applied Mathematics, Vol. 70, No. 1. (2009), pp. 302-332. by Daniel Coombs, Ronny Straube, Michael Ward posted to diffusion mathematics by sobolevnrm on 2009-06-23 14:05:03 as
	Characterizing the resistance generated by a molecular bond as it is forcibly separated [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 22. (2 June 2009), pp. 8818-8823. by L. B. Freund posted to diffusion free_energy mechanics by sobolevnrm on 2009-06-16 12:39:35 as along with 2 people bobturner paulschlesinger
	Nonspecific DNA-Protein Interaction: Why Proteins Can Diffuse along DNA [My Copy] Physical Review Letters, Vol. 102, No. 22. (2009), 228101. by Vincent Dahirel, Fabien Paillusson, Marie Jardat, Maria Barbi, Jean M. Victor posted to diffusion electrostatics nucleic_acids by sobolevnrm on 2009-06-15 00:13:53 as along with 7 people zeldin kumar_physics flbarroso edws jjray spm82 scratchmandoo
	Radially Projected Finite Elements [My Copy] SIAM Journal on Scientific Computing, Vol. 31, No. 3. (2009), pp. 2368-2385. by Amnon J. Meir, Necibe Tuncer posted to finite_element diffusion mathematics by sobolevnrm on 2009-06-09 12:27:50 as along with 1 group baker-group
	Darwinian biophysics: Electrostatics and evolution in the kinetics of molecular binding [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 19. (12 May 2009), pp. 7683-7684. by J. Andrew McCammon posted to diffusion electrostatics review by sobolevnrm on 2009-05-27 12:02:43 as along with 4 people and 1 group flbarroso apaydin shenjjjj jjray baker-group
	On the time taken by random walks on finite groups to visit every state [My Copy] Probability Theory and Related Fields, Vol. 62, No. 3. (1 September 1983), pp. 361-374. by David J. Aldous posted to diffusion kinetics statistical_mechanics by sobolevnrm on 2009-05-13 12:11:50 as along with 1 group baker-group
	Diffusion-controlled reaction on an elliptic site [My Copy] The Journal of Chemical Physics, Vol. 130, No. 17. (2009), 176103. by William Strieder posted to diffusion mathematics by sobolevnrm on 2009-05-08 12:26:57 as along with 1 group baker-group
	Simulating the electrostatic guidance of the vectorial translocations in hexameric helicases and translocases [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 18. (5 May 2009), pp. 7449-7454. by Hanbin Liu, Yemin Shi, Xiaojiang S. Chen, Arieh Warshel posted to diffusion electrostatics protein-nucleic_acid_interactions by sobolevnrm on 2009-05-07 12:59:55 as along with 1 person and 2 groups barry McCammon baker-group
	The Reaction-Diffusion Master Equation as an Asymptotic Approximation of Diffusion to a Small Target [My Copy] SIAM Journal on Applied Mathematics, Vol. 70, No. 1. (2009), pp. 77-111. by Samuel A. Isaacson posted to diffusion mathematics by sobolevnrm on 2009-05-07 12:58:33 as along with 1 person and 1 group ddcttrl baker-group
	Aminoglycoside Association Pathways with the 30S Ribosomal Subunit [My Copy] The Journal of Physical Chemistry B, Vol. 0, No. 0. (0000) by Maciej Długosz, Joanna Trylska posted to diffusion protein-ligand_interactions ribosome by sobolevnrm on 2009-04-30 12:16:51 as along with 1 person and 2 groups jmccammon McCammon baker-group
	Dissection of the high rate constant for the binding of a ribotoxin to the ribosome [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 17. (28 April 2009), pp. 6974-6979. by Sanbo Qin, Huan-Xiang Zhou posted to diffusion electrostatics ribosome by sobolevnrm on 2009-04-29 12:27:38 as along with 1 group baker-group
	Bulk-mediated surface diffusion along a cylinder: Propagators and crossovers [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 4. (2009), 040105. by Aleksei V. Chechkin, Irwin M. Zaid, Michael A. Lomholt, Igor M. Sokolov, Ralf Metzler posted to diffusion protein-nucleic_acid_interactions by sobolevnrm on 2009-04-28 12:22:33 as along with 1 group baker-group
	Effect of Surface Charge on Colloidal Charge Reversal [My Copy] The Journal of Physical Chemistry B (22 April 2009), 090422124644022. by A. Martiìn-Molina, C. Rodriìguez-Beas, R. Hidalgo-Aìlvarez, M. Quesada-Peìrez posted to beyond_mean_field diffusion electrostatics statistical_mechanics by sobolevnrm on 2009-04-23 12:32:20 as along with 1 group baker-group
	An [script O](N[sup 2]) approximation for hydrodynamic interactions in Brownian dynamics simulations [My Copy] The Journal of Chemical Physics, Vol. 130, No. 11. (2009), 114905. by Tihamér Geyer, Uwe Winter posted to diffusion hydrodynamics kinetics molecular_dynamics solvation by sobolevnrm on 2009-04-20 12:33:18 as along with 1 group baker-group
	Conductimetric determination of thermodynamic pairing constants for symmetrical electrolytes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 77, No. 1. (January 1980), pp. 34-38. by Raymond M. Fuoss posted to diffusion electrostatics solvation by sobolevnrm on 2009-04-17 13:03:16 as along with 1 group baker-group
	Conductance-concentration function for associated symmetrical electrolytes [My Copy] The Journal of Physical Chemistry, Vol. 79, No. 18. (1 August 1975), pp. 1983-1983. by Raymond M. Fuoss posted to diffusion electrostatics solvation by sobolevnrm on 2009-04-17 13:03:08 as along with 1 group baker-group
	Transition Cases in the Distribution of Ions [My Copy] Journal of the American Chemical Society, Vol. 57, No. 12. (1 December 1935), pp. 2604-2607. by Raymond M. Fuoss posted to diffusion electrostatics solvation by sobolevnrm on 2009-04-17 13:03:00 as along with 1 group baker-group
	Equation-Free Multiscale Computation: Algorithms and Applications [My Copy] Annual Review of Physical Chemistry, Vol. 60, No. 1. (2009), pp. 321-344. by Ioannis G. Kevrekidis, Giovanni Samaey posted to diffusion mathematics multiscale review by sobolevnrm on 2009-04-01 12:55:09 as along with 2 people and 1 group Borelli nurban baker-group
	Phase-field modeling of the dynamics of multicomponent vesicles: Spinodal decomposition, coarsening, budding, and fission [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 3. (2009), 031926. by John S. Lowengrub, Andreas Rätz, Axel Voigt posted to biomembranes diffusion mathematics by sobolevnrm on 2009-04-01 12:54:49 as along with 1 group baker-group
	Convergence rate for numerical computation of the lattice Green's function [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 3. (2009), 037701. by M. Ghazisaeidi, D. R. Trinkle posted to diffusion electrostatics mathematics by sobolevnrm on 2009-03-27 11:55:46 as along with 1 person and 1 group michaelbussmann baker-group
	Drift-Diffusion Past a Circle: Shadow Region Asymptotics [My Copy] SIAM Journal on Applied Mathematics, Vol. 69, No. 6. (2009), pp. 1559-1579. by Sean Lynch, Charles Knessl posted to diffusion mathematics by sobolevnrm on 2009-03-26 11:35:51 as along with 1 group baker-group
	Quasielastic neutron scattering investigation of motion of water molecules in n-propyl alcohol-water mixture [My Copy] The Journal of Chemical Physics, Vol. 130, No. 7. (2009), 074503. by Masaru Nakada, Kenji Maruyama, Osamu Yamamuro, Masakatsu Misawa posted to diffusion kinetics solvation statistical_mechanics by sobolevnrm on 2009-03-24 12:22:31 as along with 1 group baker-group
	High frequency dynamics in liquids and supercritical fluids: A comparative inelastic x-ray scattering study [My Copy] The Journal of Chemical Physics, Vol. 130, No. 6. (2009), 064501. by F. Bencivenga, A. Cunsolo, M. Krisch, G. Monaco, G. Ruocco, F. Sette posted to diffusion kinetics solvation statistical_mechanics by sobolevnrm on 2009-03-22 14:03:53 as along with 1 group baker-group
	Fundamental Aspects of Protein−Protein Association Kinetics [My Copy] Chemical Reviews, Vol. 109, No. 3. (11 March 2009), pp. 839-860. by G. Schreiber, G. Haran, H. X. Zhou posted to diffusion kinetics protein-protein_interactions review by sobolevnrm on 2009-03-20 11:51:02 as along with 10 people and 2 groups anuragsethi barry sunhwan jmccammon willard kafuitay carlosjavierna sschurer hadesnumb paulschlesinger McCammon baker-group
	Solvation Dynamics in Polar Solvents Studied by Means of RISM/Mode-Coupling Theory [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 9. (5 March 2009), pp. 2800-2804. by Katsura Nishiyama, Tsuyoshi Yamaguchi, Fumio Hirata posted to diffusion integral_equation kinetics solvation statistical_mechanics by sobolevnrm on 2009-03-20 11:50:06 as along with 1 person and 1 group willard baker-group
	Striking Effects of Hydrodynamic Interactions on the Simulated Diffusion and Folding of Proteins [My Copy] Journal of Chemical Theory and Computation, Vol. 5, No. 2. (10 February 2009), pp. 242-256. by Tamara Frembgen-Kesner, Adrian H. Elcock posted to diffusion protein-protein_interactions protein_folding solvation by sobolevnrm on 2009-03-19 12:06:25 as along with 2 people and 2 groups barry jmccammon baker-group McCammon
	Multidimensional Langevin modeling of biomolecular dynamics [My Copy] The Journal of Chemical Physics, Vol. 130, No. 3. (2009), 034106. by Rainer Hegger, Gerhard Stock posted to diffusion kinetics multiscale quasiharmonic_models by sobolevnrm on 2009-03-18 11:28:11 as along with 1 person and 1 group Diego_Prada baker-group
	Protein Sliding along DNA: Dynamics and Structural Characterization [My Copy] Journal of Molecular Biology, Vol. 385, No. 4. (30 January 2009), pp. 1087-1097. by O. Givaty, Y. Levy posted to diffusion protein-nucleic_acid_interactions by sobolevnrm on 2009-03-18 11:22:43 as along with 2 people and 1 group barry reyez baker-group
	Subdiffusion and lateral diffusion coefficient of lipid atoms and molecules in phospholipid bilayers [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 1. (2009), 011907. by Elijah Flenner, Jhuma Das, Maikel C. Rheinstädter, Ioan Kosztin posted to biomembranes diffusion by sobolevnrm on 2009-03-13 11:26:38 as along with 3 people and 1 group georgwachter ruvido softsimu baker-group
	Photosynthetic apparatus of purple bacteria [My Copy] Quarterly Reviews of Biophysics, Vol. 35, No. 01. (2002), pp. 1-62. by Xiche Hu, Thorsten Ritz, Ana Damjanovic, Felix Autenrieth, Klaus Schulten posted to diffusion review systems_biology by sobolevnrm on 2009-03-13 11:20:35 as along with 1 group baker-group
	Dynamics of protein-protein encounter: A Langevin equation approach with reaction patches [My Copy] The Journal of Chemical Physics, Vol. 129, No. 15. (2008) by Jakob Schluttig, Denitsa Alamanova, Volkhard Helms, Ulrich S. Schwarz posted to diffusion kinetics protein-protein_interactions by sobolevnrm on 2009-03-12 12:33:00 as along with 3 people and 2 groups anuragsethi barry jmccammon baker-group McCammon

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