CiteULike: softsimu's Tieleman:DP [17 articles]

	Molecular View of Cholesterol Flip-Flop and Chemical Potential in Different Membrane Environments [My Copy] Journal of the American Chemical Society, Vol. 131, No. 35. (9 September 2009), pp. 12714-12720. by W. F. Drew Bennett, Justin L. MacCallum, Marlon J. Hinner, Siewert J. Marrink, D. Peter Tieleman posted to flip-flop cholesterol chemical_potential by softsimu on 2009-11-21 15:03:23 as along with 1 person sobolevnrm
	The MARTINI Coarse-Grained Force Field: Extension to Proteins [My Copy] Journal of Chemical Theory and Computation, Vol. 4, No. 5. (1 May 2008), pp. 819-834. by Luca Monticelli, Senthil K. Kandasamy, Xavier Periole, Ronald G. Larson, D. Peter Tieleman, Siewert-Jan Marrink posted to coarse-graining martini by softsimu on 2008-06-27 19:29:01 as along with 13 people and 3 groups arnaucordomi dimka oteri sunrise flbarroso A_Coletta_Thesis krapnik Marine middledomain sobolevnrm Ema aqeel DanielParton Structural Biology Group TorVergata Molecular dynamics in MSU baker-group
	Molecular Dynamics Simulation of a Polyunsaturated Lipid Bilayer Susceptible to Lipid Peroxidation [My Copy] J. Phys. Chem. B, Vol. 108, No. 22. (3 June 2004), pp. 7170-7179. by M. Bachar, P. Brunelle, D. P. Tieleman, A. Rauk posted to double-bond by softsimu on 2008-04-11 23:24:30 as
	A Molecular Dynamics Study of the Pores Formed by Escherichia coli OmpF Porin in a Fully Hydrated Palmitoyloleoylphosphatidylcholine Bilayer [My Copy] Biophys. J., Vol. 74, No. 6. (1 June 1998), pp. 2786-2801. by D. P. Tieleman, H. J. . C. Berendsen posted to ompf pope pores by softsimu on 2008-02-18 00:02:34 as along with 1 person robertvacha
	Molecular Dynamics Simulations of Dodecylphosphocholine Micelles at Three Different Aggregate Sizes: Micellar Structure and Chain Relaxation [My Copy] J. Phys. Chem. B, Vol. 104 (2000) by D. P. Tieleman, D. van der Spoel, H. J. C. Berendsen posted to bibtex-import membranes micelles by softsimu on 2008-02-11 18:03:16 as
	Pressure-Area Isotherm of a Lipid Monolayer from Molecular Dynamics Simulations [My Copy] Langmuir (1 November 2007), pp. 12617-12623. by S. Baoukina, L. Monticelli, S. J. Marrink, D. P. Tieleman posted to monolayers by softsimu on 2008-02-07 22:40:54 as along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
	Nanopore Formation and Phosphatidylserine Externalization in a Phospholipid Bilayer at High Transmembrane Potential. [My Copy] J Am Chem Soc, Vol. 128, No. 19. (17 May 2006), pp. 6288-6289. by P T. Vernier, Matthew J. Ziegler, Yinghua Sun, Wenji V. Chang, Martin A. Gundersen, D P. Tieleman posted to translocation by softsimu on 2008-02-07 22:38:41 as along with 1 person divadyrral
	Molecular dynamics simulation of a palmitoyl-oleoyl phosphatidylserine bilayer with Na+ counterions and NaCl. [My Copy] Biophys J, Vol. 86, No. 3. (March 2004), pp. 1601-1609. by P. Mukhopadhyay, L. Monticelli, D. P. Tieleman posted to anionic pops salt by softsimu on 2008-01-30 18:57:10 as along with 3 people dimka easybakemuffin robertvacha
	Methodological Issues in Lipid Bilayer Simulations [My Copy] J. Phys. Chem. B, Vol. 107, No. 35. (4 September 2003), pp. 9424-9433. by C. Anezo, A. H. Devries, H. D. Holtje, D. P. Tieleman, S. J. Marrink posted to electrostatics membranes by softsimu on 2008-01-21 17:45:00 as along with 2 people choonpeng agrossfield
	Lipids Out of Equilibrium: Energetics of Desorption and Pore Mediated Flip-Flop [My Copy] J. Am. Chem. Soc., Vol. 128, No. 38. (27 September 2006), pp. 12462-12467. by D. P. Tieleman, S. J. Marrink posted to flip-flop by softsimu on 2008-01-18 19:00:18 as along with 2 people sunnytov agrossfield
	The MARTINI Force Field: Coarse Grained Model for Biomolecular Simulations. [My Copy] Journal of Physical Chemistry B, Vol. 111, No. 27. (1 July 2007), pp. 7812-7824. by Siewert J. Marrink, H. J. Risselada, Serge Yefimov, D. P. Tieleman, Alex H. Vries posted to coarse-graining force force-field martini by softsimu on 2008-01-10 14:23:39 as along with 7 people and 2 groups anuragsethi sunrise A_Coletta_Thesis Marine choonpeng dimka sunnytov Structural Biology Group TorVergata Molecular dynamics in MSU
	A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems [My Copy] Biochim. Biophys. Acta, Vol. 1331, No. 3. (November 1997), pp. 235-270. by D. P. Tieleman, S. J. Marrink, H. J. C. Berendsen posted to no-tag by softsimu on 2007-12-12 01:33:26 as
	A computer perspective of membranes: Molecular dynamics studies of lipid bilayer systems [My Copy] Biochim. Biophys. Acta, Vol. 1331 (1997), pp. 235-270. by D. P. Tieleman, S. J. Marrink, H. J. C. Berendsen posted to bibtex-import bilayers dynamics membranes molecular by softsimu on 2007-12-11 21:31:52 as
	Molecular dynamics simulations of a fully hydrated dipalmitoylphosphatidylcholine bilayer with different macroscopic boundary conditions and parameters [My Copy] J. Chem. Phys., Vol. 105 (1996), pp. 4871-4880. by D. P. Tieleman, H. J. C. Berendsen posted to bibtex-import dppc by softsimu on 2007-12-11 21:31:52 as
	Alamethicin helices in a bilayer and in solution: Molecular dynamics simulations [My Copy] Biophys. J., Vol. 76 (1999), pp. 40-49. by D. P. Tieleman, M. S. P. Sansom, H. J. C. Berendsen posted to alamethicin bibtex-import membranes by softsimu on 2007-12-11 21:31:31 as
	Implicit solvent model estimates of the stability of model structures of the alamethicin channel [My Copy] Eur. Biophys. J., Vol. 33 (2004), pp. 16-28. by A. Kessel, D. P. Tieleman, Ben N. Tal posted to bibtex-import pme twin-range by softsimu on 2007-12-11 21:31:30 as
	Molecular Dynamics Simulation of the Kinetics of Spontaneous Micelle Formation [My Copy] J. Phys. Chem. B, Vol. 104 (2000), pp. 12165-12173. by S. J. Marrink, D. P. Tieleman, A. E. Mark posted to coarse-graining dpc micelles by softsimu on 2007-12-11 21:31:03 as

softsimu's Tieleman:DP [17 articles] Export

softsimu's tags

bibtex-import	3999
micelles	243
membranes	147
sds	134
dpd	114
cdw	112
actin	104
cardiolipin	95
water	85
electrostatics	78
cholesterol	76
coarse-graining	67
polymers	65
proteins	65
diffusion	58
glut	56
turing	56
salt	56
d20	52
denaturation	45
rafts	44
comt	44
ewald-summation	43
lipids	42
fusion	41
cold	41
file-import-08-10-15	39
monte-carlo	38
hemolysin	38
nopdf	38
glycolipids	37
ions	37
cell-division	36
colloids	36
vesicles	34
pressure	33
nanopores	32
alcohol	31
crumpling	31
nalp	30
dep	30
mineralization	30
glasses	29
motors	28
electrorheology	27
poisson-boltzmann	27
ethanol	26
superconductivity	26
dna	26
fission	25
peptides	25
jarzynski	25
lateral	24
folding	23
translocation	23
electrokinetics	23
asters	22
popc	22
pores	21
free-energy	21
hdl	20
overcharging	20
dmpc	20
abc	20
saponins	19
double-bond	19
peth	19
phosphatidylethanol	18
transport-pore	18
force-fields	18
nanotubes	18
molecular-dynamics	18
integrators	17
monolayers	17
instabilities	17
nmr	17
anesthesia	17
pfc	17
file-import-08-10-02	16
shear	16
dynamics	16
rotaball	16
polyelectrolytes	16
hydrophobicity	16
dppc	16
drug-delivery	15
molecular	15
cationic	15
glyco	15
mrks-diff	15
pinning	14
hydroxyapatite	14
sphingosine	14
ldl	14
anionic	14
self-assembly	14
pop	13
hydrophobicty	13
abf	13
dopc	12
copolymers	12
mitochondria	12
sirna	12
surfaces	12
binding-affinity	12
pope	12
ctab	12
free	12
friction	12
block	12
lipoproteins	11
lekner	11
sterols	11
kinesin	11
hydrodynamics	11
channels	11
clathrate	11
desmosterol	10
self-organization	10
bilayers	10
transportan	10
simulation	10
force	10
energy	10
fracture	10
gromacs	10
phase-slip	10
popg	9
amyloid	9
brownian-dynamics	9
flowers	9
wang-landau	9
surfactants	9
review	9
diffusion-proton	9
diffusion-ions	9
domains	9
melts	9
vortex	9
pressure-profile	9
detergents	8
spc	8
coulomb	8
liposomes	8
phase-field	8
viscosity	8
diffusion-protons	8
force-field	8
fields	8
charged	8
eckhaus	8
lattice-boltzmann	8
penetratin	8
dielectrophoresis	8
ftsz	8
wetting	8
ginzburg-landau	8
solvation	8
cytochrome	7
cytoskeleton	7
alzheimers	7
nacl	7
peierls	7
cytokinesis	7
thermostat	7
osteopontin	7
dendrimers	7
phase	7
microfludics	7
md	7
materials	7
mb-model	7
heparan	7
electrophoresis	6
lj-phase	6
imc	6
flux-lines	6
transitions	6
sphingomyelin	6
dmtap	6
h-bonds	6
apo-a1	6
sopc	6
nemd	6
pattern-formation	6
reptation	6
mullins-sekerka	6
vacf	6
phd-thesis	6
elasticity	6
rot	6
som	6
kosterlitz-thouless	6
granular	6
cacl	6
formation	6
peptide	6
membrane-gel	6
ion-membrane-interaction	6
photoswitches	6
s1-specificity	5
ketosterol	5
fibers	5
sph	5
neural-nets	5
commensurability	5
gels	5
supported-bilaters	5
cold-denaturation	5
stability	5
lung-surfactant	5
pme	5
electrostatics-membranes	5
nanotech	5
structure	5
stencils	5
fluid	5
pattern	5
nucleation	5
electrorotation	5
lubrication	5
methanol	5
boundary	5
rhodopsin	5
frenkel-kontorova	5
transition	5
tip4p	5
nanopumps	5
graded	5
hydrophobic	5
debye-huckel	5
pops	5
solubilization	4
systems	4
fem	4
myosin	4
flip-flop	4
electrolytes	4
magnesium	4
calcium	4
gb3	4
integrators-dpd	4
aquaporin	4
brownian-motion	4
7-dehydrocholesterol	4
peg	4
liquid-crystals	4
phase-separation	4
qs21	4
implicit-solvent	4
receptors	4
ceramides	4
heparin	4
opls	4
designability	4
scaling	4
sphingolipids	4
file-import-08-10-07	4
sialoprotein	4
micelle	4
dielectrics	4
vaccines	4
tip3p	4
spin-labels	4
charmm	4
neg-cv	4
qm-mm	4
shs	4
pi-interactions	4
polarizability	3
van-der-waals	3
dha	3
defects	3
ergosterol	3
eukaryotes	3
dewetting	3
earthquakes	3
2-4	3
soc	3
flow	3
lipoprotein	3
artifacts	3
dpc	3
sans	3
forces	3
lipid	3
phase-diagram	3
son	3
symplectic	3
endocytosis	3
ospc	3
magnetic-stripes	3
pmf	3
signaling	3
magnetic	3
dotap	3
superfluidity	3
block-copolymers	3
nanowires	3
phospholipid	3
min-oscillations	3
fokker-planck	3
amp	3
rouse	3
lipid-isomers	3
maria	3
fluids	3
henderson	3
fene	3
lanosterol	3
ferrofluids	3
amber	3
stxb	3
oil	3
namd	3
percolation	3
plotting	3
parallel-tempering	3
dppe	3
dendrites	3
molecular-simulation	3
delta	3
onions	3
mori-zwanzig	3
nose-hoover	3
lumped-mass	2
partitioning	2
protrusions	2
layer	2
guv	2
martini	2
ompf	2
fmm	2
voronoi	2
rupture	2
collapse	2
ion-channel	2
p3m	2
pna	2
caox	2
fluctuations	2
hydration	2
separation	2
self-organized-criticality	2
fluid-dynamics	2
sdw	2
instability	2
apoptosis	2
generic	2
trehalose	2
foams	2
counterion	2
critical-phenenomena	2
nanoparticles	2
dlpc	2
pe	2
lattice	2
ecoli	2
sensors	2
trotter	2
legendre	2
cholester	2
mg	2
ctabr	2
reaction-diffusion	2
dislocations	2
ab-initio	2
dft	2
gouy-chapman	2
emulsions	2
ionization	2
kpz	2
sglt	2
py	2
7dhc	2
ctac	2
multiple-time-step	2
shadow-hamiltonian	2
energies	2
stern	2
factor	2
chemical_potential	2
field	2
rna	2
laplacian	2
cyclodextrin	2
model	2
ca	2
permeation	2
polymer	2
resp	2
persistence-length	2
espresso	2
order-parameter	2
tilt	2
ostwald	2
gibbs-bogoliubov	2
magnetorheology	2
alchohol	2
toxin	2
enzymes	2
multigrid	2
crystallization	2
complex-fluids	2
dtab	2
mds	2
spinodal-decomposition	2
dendritic	2
topological	2
dspc	2
growth	2
dlvo	2
meso	2
liposome	1
pept1	1
density-functional	1
monoayers	1
transport	1
capillarity	1
troblocks	1
tension	1
phase-sl	1
osteoarthritis	1
nanocomposite	1
ligands	1
force-spectroscopy	1
fitting	1
membrane-proteins	1
prosthetic	1
glyc	1
doxorubicin	1
metallic-nanoparticles	1
tweezers	1
kohn-anomaly	1
hydrodynamocs	1
twin-range-cutoff	1
pah	1
specle	1
magnetoelectric	1
matter	1
peo	1
coatings	1
namd2	1
mscl	1
gating	1
implants	1
x-ray	1
transduction	1
stxx	1
hopping	1
lammps	1
pc	1
stokeslets	1
bacterial	1
polymer-melts	1
curvature	1
antennapedia	1
pepg	1
egf	1
cationic-lipids	1
green-kubo	1
dssp	1
dlpe	1
slab	1
invariance	1
bundles	1
barostat	1
omp	1
graphite	1
dpps	1
parameters	1
ctacl	1
saxs	1
lateral-pressure	1
kcsa	1
films	1
twin-range	1
crystals	1
aluminum	1
molecular-medicine	1
dptap	1
length	1
non-ionic	1
dope	1
dmso	1
epicholesterol	1
tutring	1
apo-b	1
cdima	1
self-gravitation	1
dmpg	1
liquid	1
madelung	1
dmpe	1
dynamical-systems	1
proylyloligopeptidase	1
pulling	1
roughening	1
of	1