softsimu's water [85 articles] Export

Recent papers added to softsimu's library classified by the tag water. You can also see everyone's water.

	Water as a Biomolecule [My Copy] ChemPhysChem, Vol. 9, No. 18. (2008), pp. 2677-2685. by Philip Ball posted to water hydrophobicty by softsimu on 2009-11-17 18:11:32 as along with 1 person middledomain
	Three-dimensional “Mercedes-Benz” model for water [My Copy] The Journal of Chemical Physics, Vol. 131, No. 5. (2009), 054505. by Cristiano L. Dias, Tapio A. Nissila, Martin Grant, Mikko Karttunen posted to water mercedes_benz by softsimu on 2009-10-29 15:35:11 as along with 2 people sobolevnrm dlimmer
	How to Make Water Run Uphill. [My Copy] Science (New York, N.Y.), Vol. 256, No. 5063. (12 June 1992), pp. 1539-1541. by Manoj K K. Chaudhury, George M M. Whitesides posted to nanopores water by softsimu on 2009-02-04 18:13:04 as along with 1 person bescarff
	Mobility and solvation of ions in channels [My Copy] The Journal of Chemical Physics, Vol. 105, No. 20. (1996), pp. 9266-9280. by R. M. Lynden-Bell, Jayendran C. Rasaiah posted to ion-channel nanopores solvation water by softsimu on 2009-02-04 17:42:05 as
	Hydrogen-bond kinetics in liquid water [My Copy] Nature, Vol. 379 (1996), pp. 55-57. by D. Chandler, A. Luzar posted to h-bonds water by softsimu on 2009-02-04 17:40:00 as
	Pressure Dependence of the Radial Breathing Mode of Carbon Nanotubes: The Effect of Fluid Adsorption [My Copy] Physical Review Letters, Vol. 98, No. 14. (2007) by M. J. Longhurst, N. Quirke posted to nanopores water by softsimu on 2009-02-04 17:35:10 as
	Anomalously Immobilized Water: A New Water Phase Induced by Confinement in Nanotubes [My Copy] Nano Letters, Vol. 3, No. 5. (1 May 2003), pp. 589-592. by Jay R. Mashl, Sony Joseph, N. R. Aluru, Eric Jakobsson posted to nanopores nanotubes water by softsimu on 2009-02-04 17:32:45 as
	Finite-Size Effect and Wall Polarization in a Carbon Nanotube Channel [My Copy] Nano Letters, Vol. 4, No. 12. (1 December 2004), pp. 2383-2387. by Deyu Lu, Yan Li, Slava V. Rotkin, Umberto Ravaioli, Klaus Schulten posted to nanopores nanotubes water by softsimu on 2009-02-04 17:32:00 as
	Electrolytic Transport in Modified Carbon Nanotubes [My Copy] Nano Letters, Vol. 3, No. 10. (1 October 2003), pp. 1399-1403. by Sony Joseph, Jay R. Mashl, Eric Jakobsson, N. R. Aluru posted to nanopores nanotubes water by softsimu on 2009-02-04 17:31:24 as
	Ab initio study of H[sub 2]O and water-chain-induced properties of carbon nanotubes [My Copy] Physical Review B (Condensed Matter and Materials Physics), Vol. 75, No. 19. (2007) by B. K. Agrawal, V. Singh, A. Pathak, R. Srivastava posted to nanopores nanotubes water by softsimu on 2009-02-04 17:30:49 as
	The origins and the future of microfluidics. [My Copy] Nature, Vol. 442, No. 7101. (27 July 2006), pp. 368-373. by George M. Whitesides posted to microfludics nanopores water by softsimu on 2009-02-04 17:18:17 as along with 10 people and 1 group caducadu Olorin ChonU abhishek_tiwari armani kdesmond whutabarat bescarff kristgy KevinLau microfluidics
	Development of an improved four-site water model for biomolecular simulations: TIP4P-Ew [My Copy] The Journal of Chemical Physics, Vol. 120, No. 20. (2004), pp. 9665-9678. by Hans W. Horn, William C. Swope, Jed W. Pitera, et al.Jeffry D. Madura, Thomas J. Dick, Greg L. Hura, Teresa Head-Gordon posted to tip4p water by softsimu on 2009-01-27 18:29:40 as along with 3 people and 1 group bmduggan Lombardo_7 whitead Jiang Research Group
	Classical interaction model for the water molecule [My Copy] The Journal of Chemical Physics, Vol. 126, No. 18. (2007) by András Baranyai, Albert Bartók posted to water by softsimu on 2009-01-27 18:27:49 as
	Formation of Ice-like Water Structure on the Surface of an Antifreeze Protein† [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 19. (1 May 2008), pp. 6193-6202. by Nikolai Smolin, Valerie Daggett posted to antifreeze water by softsimu on 2009-01-27 17:32:15 as along with 1 person and 1 group whitead Jiang Research Group
	What ice can teach us about water interactions: a critical comparison of the performance of different water models [My Copy] Faraday Discuss., Vol. 141 (2009), pp. 251-276. by C. Vega, J. L. F. Abascal, M. M. Conde, J. L. Aragones posted to water by softsimu on 2009-01-27 17:27:24 as along with 1 person and 1 group whitead Jiang Research Group
	Two-Dimensional Water and Ice Layers: Neutron Diffraction Studies at 278, 263, and 20 K [My Copy] J. Am. Chem. Soc., Vol. 124, No. 47. (27 November 2002), pp. 14010-14011. by C. Janiak, T. G. Scharmann, S. A. Mason posted to mb-model water by softsimu on 2008-11-12 20:40:40 as
	Flexible simple point-charge water model with improved liquid-state properties [My Copy] The Journal of Chemical Physics, Vol. 124, No. 2. (2006) by Yujie Wu, Harald L. Tepper, Gregory A. Voth posted to spc spc-e water by softsimu on 2008-11-12 20:37:03 as along with 2 people vitroid maaren
	Mercedes Benz model of neutral amino-acid side chains [My Copy] Journal of Molecular Structure: THEOCHEM, Vol. 774, No. 1-3. (06 November 2006), pp. 23-28. by J. Becker, O. Collet posted to mb-model proteins water by softsimu on 2008-11-12 20:35:16 as
	Balancing local order and long-ranged interactions in the molecular theory of liquid water [My Copy] The Journal of Chemical Physics, Vol. 127, No. 14. (2007) by J. K. Shah, D. Asthagiri, L. R. Pratt, M. E. Paulaitis posted to tip3p water by softsimu on 2008-11-12 20:33:49 as
	Temperature, pressure, and isotope effects on the structure and properties of liquid water: A lattice approach [My Copy] The Journal of Chemical Physics, Vol. 127, No. 22. (2007) by Ilhem F. Hakem, Abdelhak Boussaid, Hafida B. Taleb, Michael R. Bockstaller posted to d20 water by softsimu on 2008-11-12 20:32:11 as
	A coarse-grained alpha-carbon protein model with anisotropic hydrogen-bonding [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 70, No. 3. (2008), pp. 626-638. by Eng-Hui Yap, Nicolas L. Fawzi, Teresa Head-Gordon posted to proteins water by softsimu on 2008-11-12 20:28:28 as along with 1 person flbarroso
	A Simple Model of Water and the Hydrophobic Effect [My Copy] J. Am. Chem. Soc., Vol. 120, No. 13. (8 April 1998), pp. 3166-3175. by K. A. T. Silverstein, A. D. J. Haymet, K. A. Dill posted to mb-model water by softsimu on 2008-11-12 20:26:23 as along with 1 person Lombardo_7
	The Mechanism of Hydrophobic Solvation Depends on Solute Radius [My Copy] J. Phys. Chem. B, Vol. 104, No. 6. (17 February 2000), pp. 1326-1331. by N. T. Southall, K. A. Dill posted to mb-model water by softsimu on 2008-11-12 20:25:31 as along with 2 people sunrise dfgreen
	Protein Folding, Stability, and Solvation Structure in Osmolyte Solutions [My Copy] Biophys. J., Vol. 89, No. 5. (1 November 2005), pp. 2988-2997. by Jorg Rosgen, Montgomery B. Pettitt, David W. Bolen posted to proteins water by softsimu on 2008-11-12 20:22:03 as
	Improving implicit solvent simulations: a Poisson-centric view [My Copy] Current Opinion in Structural Biology, Vol. 15, No. 2. (April 2005), pp. 137-143. by N. Baker posted to implicit-solvent poisson-boltzmann water by softsimu on 2008-11-12 20:19:53 as along with 5 people oteri flbarroso ttjoseph qwermish RamuAnandakrishnan
	Statistical Mechanics of “Waterlike” Particles in Two Dimensions. I. Physical Model and Application of the Percus--Yevick Equation [My Copy] The Journal of Chemical Physics, Vol. 54, No. 9. (1971), pp. 3682-3695. by Ben A. Naim posted to mb-model py water by softsimu on 2008-11-12 20:17:36 as
	A simple analytical model of water [My Copy] Biophysical Chemistry, Vol. 105, No. 2-3. (September 2003), pp. 449-459. by T. Truskett posted to mb-model water by softsimu on 2008-11-12 20:16:20 as
	Phase behaviour of metastable water [My Copy] Nature, Vol. 360, No. 6402. (26 November 1992), pp. 324-328. by Peter H. Poole, Francesco Sciortino, Ulrich Essmann, Eugene H. Stanley posted to water by softsimu on 2008-11-12 20:13:52 as
	Simple short-ranged models of water and their application. A review [My Copy] Journal of Molecular Liquids, Vol. 73-74 (November 1997), pp. 317-336. by I. Nezbeda posted to water by softsimu on 2008-11-12 20:13:00 as
	Comparison of simple potential functions for simulating liquid water [My Copy] The Journal of Chemical Physics, Vol. 79, No. 2. (1983), pp. 926-935. by William L. Jorgensen, Jayaraman Chandrasekhar, Jeffry D. Madura, Roger W. Impey, Michael L. Klein posted to spc tip3p tip4p water by softsimu on 2008-11-12 20:10:30 as along with 17 people and 1 group jmparks fralium bmduggan kulinskii ibuch Lombardo_7 paddydu dfgreen mleis ttjoseph ffranca easybakemuffin ashaytan RamuAnandakrishnan r2s2 pavanghatty Diego_Prada CMB
	New perspectives on hydrophobic effects [My Copy] Chemical Physics, Vol. 258, No. 2-3. (15 August 2000), pp. 349-370. by G. Hummer posted to d20 water by softsimu on 2008-11-12 20:08:30 as
	Inhomogeneity effects on the structure and dynamics of water at the surface of a membrane: A computer simulation study [My Copy] The Journal of Chemical Physics, Vol. 126, No. 12. (2007) by G. Garberoglio, M. Sega, R. Vallauri posted to interfaces water by softsimu on 2008-06-20 19:55:04 as
	Water at Hydrophobic Surfaces: Weak Hydrogen Bonding and Strong Orientation Effects [My Copy] Science, Vol. 292, No. 5518. (4 May 2001), pp. 908-912. by L. F. Scatena, M. G. Brown, G. L. Richmond posted to water transport-pore mineralization hydrophobicty by softsimu on 2008-04-29 16:47:44 as
	Why Are Carbon Nanotubes Fast Transporters of Water? [My Copy] Nano Lett., Vol. 8, No. 2. (13 February 2008), pp. 452-458. by S. Joseph, N. R. Aluru posted to nanopores transport-pore water by softsimu on 2008-04-29 16:42:14 as
	Quantum effects in the structure of water measured by gamma ray diffraction [My Copy] Chemical Physics, Vol. 109, No. 2-3. (15 November 1986), pp. 437-453. by J. H. Root, P. A. Egelstaff, A. Hime posted to d20 h-bonds water by softsimu on 2008-04-09 04:22:04 as
	Hydrogen Bonding in Water [My Copy] Physical Review Letters, Vol. 91, No. 21. (20 Nov 2003), 215503. by Bin Chen, Ivaylo Ivanov, Michael L. Klein, Michele Parrinello posted to d20 h-bonds water by softsimu on 2008-04-09 03:55:26 as along with 1 person kulinskii
	Cooperative Hydrogen Bonds of Macromolecules. 3. A Model Study of the Proximity Effect [My Copy] J. Phys. Chem. B, Vol. 111, No. 22. (7 June 2007), pp. 6118-6126. by J. Kriz, J. Dybal posted to d20 h-bonds water by softsimu on 2008-04-08 22:20:23 as
	Hydrogen Bonding Structure and Dynamics of Water at the Dimyristoylphosphatidylcholine Lipid Bilayer Surface from a Molecular Dynamics Simulation [My Copy] J. Phys. Chem. B, Vol. 108, No. 21. (27 May 2004), pp. 6603-6610. by C. F. Lopez, S. O. Nielsen, M. L. Klein, P. B. Moore posted to dmpc h-bonds water by softsimu on 2008-04-05 20:34:31 as along with 1 person sunrise
	Hydration structure of human lysozyme investigated by molecular dynamics simulation and cryogenic X-ray crystal structure analyses: On the correlation between crystal water sites, solvent density, and solvent dipole [My Copy] Journal of Computational Chemistry, Vol. 23, No. 14. (2002), pp. 1323-1336. by Junichi Higo, Masayoshi Nakasako posted to d20 hydration solvation water by softsimu on 2008-04-03 22:16:49 as
	Minimizing frustration by folding in an aqueous environment [My Copy] Archives of Biochemistry and Biophysics In Highlight Issue: Protein Folding, Vol. 469, No. 1. (1 January 2008), pp. 118-131. by Carla Mattos, Clay A. Clark posted to folding solvation water by softsimu on 2008-04-03 22:12:20 as
	Large-scale networks of hydration water molecules around bovine [beta]-trypsin revealed by cryogenic X-ray crystal structure analysis [My Copy] Journal of Molecular Biology, Vol. 289, No. 3. (11 June 1999), pp. 547-564. by Masayoshi Nakasako posted to d20 solvation water by softsimu on 2008-04-03 22:10:22 as
	Locating missing water molecules in protein cavities by the three-dimensional reference interaction site model theory of molecular solvation. [My Copy] Proteins, Vol. 66, No. 4. (1 March 2007), pp. 804-813. by Takashi Imai, Ryusuke Hiraoka, Andriy Kovalenko, Fumio Hirata posted to solvation water by softsimu on 2008-04-03 22:09:23 as along with 2 people and 1 group oteri sobolevnrm baker-group
	Structure and dynamics of water at the interface with phospholipid bilayers [My Copy] The Journal of Chemical Physics, Vol. 123, No. 22. (2005) by Shreyas Y. Bhide, Max L. Berkowitz posted to membranes water by softsimu on 2008-04-03 22:08:30 as
	Do we underestimate the importance of water in cell biology? [My Copy] Nature Reviews Molecular Cell Biology, Vol. 7, No. 11. (06 September 2006), pp. 861-866. by Martin Chaplin posted to water by softsimu on 2008-04-03 22:07:49 as along with 1 person choonpeng
	Water-protein interactions from high-resolution protein crystallography [My Copy] Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 359, No. 1448. (2004), pp. 1191-1206. by Masayoshi Nakasako posted to d20 protein water by softsimu on 2008-04-03 22:07:17 as along with 1 person Lombardo_7
	Hydrogen-Bond Dynamics near a Micellar Surface: Origin of the Universal Slow Relaxation at Complex Aqueous Interfaces [My Copy] Physical Review Letters, Vol. 89, No. 11. (2002), 115505. by Sundaram Balasubramanian, Subrata Pal, Biman Bagchi posted to d20 h-bonds water by softsimu on 2008-04-03 22:04:53 as
	Rotation of Structural Water inside a Protein: Calculation of the Rate and Vibrational Entropy of Activation [My Copy] J. Phys. Chem. B, Vol. 102, No. 10. (5 March 1998), pp. 1797-1805. by S. Fischer, C. S. Verma, R. E. Hubbard posted to d20 proteins water by softsimu on 2008-04-03 21:57:52 as
	Predicting water's phase diagram and liquid-state anomalies [My Copy] The Journal of Chemical Physics, Vol. 117, No. 11. (2002), pp. 5101-5104. by Thomas M. Truskett, Ken A. Dill posted to cold-denaturation mb-model water by softsimu on 2008-02-17 19:40:14 as
	Modeling Multibody Effects in Ionic Solutions with a Concentration Dependent Dielectric Permittivity [My Copy] Physical Review Letters, Vol. 96, No. 14. (2006) by Berk Hess, Christian Holm, Nico van der Vegt posted to dielectrics water by softsimu on 2008-01-30 20:20:18 as
	Effects of Phospholipid Unsaturation on the Membrane/Water Interface: A Molecular Simulation Study [My Copy] Biophys. J., Vol. 81, No. 1. (1 July 2001), pp. 170-183. by Krzysztof Murzyn, Tomasz Rog, Grzegorz Jezierski, Yuji Takaoka, Marta Pasenkiewicz-Gierula posted to membranes popc water by softsimu on 2008-01-30 18:56:27 as

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bibtex-import	3999
micelles	243
membranes	147
sds	134
dpd	114
cdw	112
actin	104
cardiolipin	95
water	85
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cholesterol	76
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proteins	65
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salt	56
turing	56
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denaturation	45
comt	44
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ions	37
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dep	30
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ethanol	26
superconductivity	26
fission	25
jarzynski	25
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asters	22
popc	22
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abc	20
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grinfeld	1
grvitation	1
gut	1
hemolyisn	1
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hofmeister	1
hopping	1
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hydrogen_bonds	1
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implants	1
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integration	1
integro-differential	1
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invariance	1
isomers	1
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kmc	1
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langevin-thermostat	1
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lecture-notes	1
length	1
lengyel-epstein	1
lennard-jones	1
ligands	1
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liposome	1
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long	1
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map	1
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matter	1
mdynamix	1
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melting	1
membrane-proteins	1
mercedes_benz	1
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mixed	1
mixture	1
molecular-medicine	1
monoayers	1
mrk-diff	1
mscl	1
multiple	1
multipole	1
multivalent	1
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namd2	1
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odlro	1
of	1
omp	1
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peo	1
pepg	1
pept1	1
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persistence	1
phase-sl	1
phoe	1
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pka	1
plant	1
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proylyloligopeptidase	1
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python	1
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reaction-field	1
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ripening	1
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rodlike	1
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saponinsn	1
sav1866	1
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sdbil	1
sdbt	1
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shake	1
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soft	1
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stxx	1
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swift-hohenberg	1
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tat	1
tayloro-couette	1
tension	1
thermodynamics	1
thiols	1
time	1
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transport	1
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tryptophan	1
tubulin	1
turbomole	1
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tutring	1
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twin-range	1
twin-range-cutoff	1
voids	1
volcanos	1
whatif	1
xenon	1
x-ray	1
xy-model	1
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