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ssfeldman's library [48 articles]

Recent papers added to ssfeldman's library.
  • Direct observation of individual RecA filaments assembling on single DNA molecules
    Nature (20 September 2006)
    by Roberto Galletto, Ichiro Amitani, Ronald J Baskin, Stephen C Kowalczykowski
    posted to thesis by ssfeldman on 2008-06-02 23:20:01 as ** along with 1 person and 1 group samjlord moernerlab
  • Effects of kink and flexible hinge defects on mechanical responses of short double-stranded DNA molecules
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 77, No. 4. (2008)
    by Hu Chen, Jie Yan
    posted to thesis by ssfeldman on 2008-06-02 23:15:00 as **
  • Stretching short biopolymers by fields and forces
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 75, No. 4. (2007)
    by Yuko Hori, Ashok Prasad, Jané Kondev
    posted to thesis by ssfeldman on 2008-06-02 23:10:32 as **
  • Tethered particle motion method for studying transcript elongation by a single RNA polymerase molecule.
    Biophysical journal, Vol. 67, No. 6. (December 1994), pp. 2468-2478.
    by H Yin, R Landick, J Gelles
    posted to thesis by ssfeldman on 2008-06-02 22:41:03 as **
  • Tethered particle motion as a diagnostic of DNA tether length.
    J Phys Chem B Condens Matter Mater Surf Interfaces Biophys, Vol. 110, No. 34. (31 August 2006), pp. 17260-17267.
    by PC Nelson, C Zurla, D Brogioli, JF Beausang, L Finzi, D Dunlap
    posted to no-tag by ssfeldman on 2008-06-02 22:39:12 as ** along with 1 person and 1 group pdelosri EPFL_SB_ITP_LBS
  • Colloidal particle motion as a diagnostic of DNA conformational transitions
    (4 Oct 2007)
    by Philip C Nelson
    posted to thesis by ssfeldman on 2008-06-02 22:30:03 as **
  • Anisotropic memory effects in confined colloidal diffusion
    (2008)
    by Sylvia Jeney, Branimir Lukić, Jonas A Kraus, Thomas Franosch, László Forró
    posted to thesis by ssfeldman on 2008-06-02 22:14:03 as **
  • Velocity Autocorrelations for Hard Spheres
    Physical Review Letters, Vol. 18, No. 23. (5 June 1967), 988.
    by BJ Alder, TE Wainwright
    posted to no-tag by ssfeldman on 2008-06-02 21:45:09 as **
  • AMOLF Thesis: Diffusion of confined colloidal particles
    by Maarten Hagen
    posted to thesis by ssfeldman on 2008-06-02 21:31:43 as **
  • Brownian particles in shear flow and harmonic potentials: A study of long-time tails
    Physical Review A, Vol. 46, No. 4. (1992), 1942.
    by HJH Clercx, PPJM Schram
    posted to thesis by ssfeldman on 2008-06-02 20:28:35 as **
  • Olympus Microscopy Resource Center: Specialized Microscopy Techniques - Darkfield Illumination
    by Mortimer Abramowitz, Michael W Davidson
    posted to no-tag by ssfeldman on 2008-06-02 20:12:50 as **
  • Light-Scattering Submicroscopic Particles as Highly Fluorescent Analogs and Their Use as Tracer Labels in Clinical and Biological Applications: I. Theory
    Analytical Biochemistry, Vol. 262, No. 2. (10 September 1998), pp. 137-156.
    by Juan Yguerabide, Evangelina E Yguerabide
    posted to yguerabide by ssfeldman on 2008-06-02 19:56:08 as **
  • Measurement of lactose repressor-mediated loop formation and breakdown in single DNA molecules
    Science, Vol. 267, No. 5196. (20 January 1995), pp. 378-380.
    by L Finzi, J Gelles
    posted to no-tag by ssfeldman on 2008-05-28 15:38:34 as **
  • A single-molecule barcoding system using nanoslits for DNA analysis
    Proceedings of the National Academy of Sciences, Vol. 104, No. 8. (12 February 2007), pp. 2673-2678.
    by Kyubong Jo, Dalia M Dhingra, Theo Odijk, Juan J de Pablo, Michael D Graham, Rod Runnheim, Dan Forrest, David C Schwartz
    posted to thesis polymer nanofabrication labeling genomics dna confinement by ssfeldman on 2008-05-28 15:12:50 as **
  • Near-wall hindered Brownian diffusion of nanoparticles examined by three-dimensional ratiometric total internal reflection fluorescence microscopy (3-D R-TIRFM)
    Experiments in Fluids, Vol. 37, No. 6. (December 2004), pp. 811-824.
    by Kihm, , Banerjee, , Choi, , Takagi,
    posted to thesis by ssfeldman on 2008-05-26 10:26:18 as **
  • Mg2+-Induced Compaction of Single RNA Molecules Monitored by Tethered Particle Microscopy
    Biophys. J., Vol. 90, No. 10. (15 May 2006), pp. 3672-3685.
    by Newby, Eva Vocker, Seth Blumberg, Stefanie Redemann, Arivalagan Gajraj, Jens-Christian Meiners, Nils G Walter
    posted to thesis by ssfeldman on 2008-05-23 10:01:17 as ** along with 1 person and 1 group skoch3 Koch_Lab
  • The Persistence Length of DNA Is Reached from the Persistence Length of its Null Isomer through an Internal Electrostatic Stretching Force.
    Biophys J (25 August 2006)
    by Gerald Manning
    posted to thesis by ssfeldman on 2008-05-21 05:22:09 as ** along with 1 person wilsoros
  • Optical Tweezers: Measuring Piconewton Forces
    posted to no-tag by ssfeldman on 2008-05-18 19:19:56 as **
  • Lateral resolution enhancement with standing evanescent waves
    Opt. Lett., Vol. 25, No. 1. (1 January 2000), pp. 46-48.
    by George E Cragg, Peter T So
    posted to peterso by ssfeldman on 2008-05-18 13:09:36 as **
  • Generalized theory of semiflexible polymers
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 73, No. 3. (2006)
    by Paul A Wiggins, Philip C Nelson
    posted to thesis by ssfeldman on 2008-04-22 09:10:53 as **** along with 2 people hsekiguc norris
  • Time-dependent diffusion coefficient as a probe of geometry
    Concepts in Magnetic Resonance Part A, Vol. 23A, No. 1. (2004), pp. 1-21.
    by Pabitra N Sen
    posted to no-tag by ssfeldman on 2008-03-28 12:26:25 as ***
  • Interaction between Gold Nanoparticles and Bovine Serum Albumin or Sheep Antirabbit Immunoglobulin G
    Chinese Journal of Chemistry, Vol. 24, No. 2. (2006), pp. 253-256.
    by Li-Mei Ao, Feng Gao, Bi-Feng Pan, Da-Xiang Cui, Hong-Chen Gu
    posted to no-tag by ssfeldman on 2008-03-24 15:25:01 as **
  • Elasticity of short DNA molecules: theory and experiment for contour lengths of 0.6-7 microm
    Biophys. J. (31 August 2007), biophysj.107.112995.
    by Yeonee Seol, Jinyu Li, Philip Nelson, Thomas T Perkins, MD Betterton
    posted to thesis by ssfeldman on 2008-03-21 13:27:29 as read along with 2 people and 1 group norris skoch3 Koch_Lab
  • A molecular ruler based on plasmon coupling of single gold and silver nanoparticles
    Nature Biotechnology, Vol. 23, No. 6. (22 May 2005), pp. 741-745.
    by Carsten Sönnichsen, Björn M Reinhard, Jan Liphardt, Paul P Alivisatos
    posted to no-tag by ssfeldman on 2008-03-20 16:10:08 as ** along with 2 people and 1 group rodney jerlf01 Kopelman_Group
  • Effect of the wall on the velocity autocorrelation function and long-time tail of Brownian motion in a viscous compressible fluid
    The Journal of Chemical Physics, Vol. 123, No. 18. (2005)
    by BU Felderhof
    posted to no-tag by ssfeldman on 2008-03-19 21:54:17 as read along with 1 person l-alex
  • Far-Field Optical Microscopy of Single Metal Nanoparticles
    Acc. Chem. Res., Vol. 38, No. 7. (19 July 2005), pp. 594-601.
    by MA Vandijk, M Lippitz, M Orrit
    posted to no-tag by ssfeldman on 2008-03-19 21:52:36 as **
  • Fast subnanometer particle localization by traveling-wave tracking
    Journal of Applied Physics, Vol. 98, No. 6. (2005)
    by Lorenzo Busoni, Aurélie Dornier, Jean L Viovy, Jacques Prost, Giovanni Cappello
    posted to thesis by ssfeldman on 2008-03-19 21:50:38 as read
  • Fine Profile of Actomyosin Motility Fluctuation Revealed by Using 40-nm Probe Beads
    Biochemical and Biophysical Research Communications, Vol. 246, No. 1. (8 May 1998), pp. 261-266.
    by Haruto Nakayama, Takako Yamaga, Yuki Kunioka
    posted to no-tag by ssfeldman on 2008-03-19 21:46:13 as ****
  • Photon correlation spectroscopy of the non-Markovian Brownian motion of spherical particles
    Physical Review A, Vol. 27, No. 5. (May 1983), 2632.
    by Kohji Ohbayashi, Tomoharu Kohno, Hiroyasu Utiyama
    posted to thesis by ssfeldman on 2008-03-19 21:16:06 as **
  • Total Internal Reflection Fluorescence Microscopy in Cell Biology
    pp. 764-774.
    by D Axelrod
    posted to thesis by ssfeldman on 2008-03-19 21:14:42 as **
  • Brownian motion near a partial-slip boundary: A local probe of the no-slip condition
    Physics of Fluids, Vol. 17, No. 10. (2005)
    by Eric Lauga, Todd M Squires
    posted to no-tag by ssfeldman on 2008-03-19 21:08:44 as **
  • Algebraic Decay of Velocity Fluctuations in a Confined Fluid
    Physical Review Letters, Vol. 78, No. 19. (12 May 1997), 3785.
    by MHJ Hagen, I Pagonabarraga, CP Lowe, D Frenkel
    posted to thesis by ssfeldman on 2008-03-19 20:56:14 as ** along with 1 person kkims
  • Algebraic decay of velocity fluctuations near a wall
    Physical Review E, Vol. 58, No. 6. (December 1998), 7288.
    by I Pagonabarraga, MHJ Hagen, CP Lowe, D Frenkel
    posted to thesis by ssfeldman on 2008-03-19 20:55:01 as **
  • Direct measurements of constrained Brownian motion of an isolated sphere between two walls
    Physical Review E, Vol. 62, No. 3. (2000), 3909.
    by Binhua Lin, Jonathan Yu, Stuart A Rice
    posted to thesis by ssfeldman on 2008-03-19 08:36:42 as ** along with 1 person rodney
  • The slow motion of a sphere through a viscous fluid towards a plane surface
    Chemical Engineering Science, Vol. 16, No. 3-4. (December 1961), pp. 242-251.
    by Howard Brenner
    posted to thesis by ssfeldman on 2008-03-19 08:35:57 as ** along with 1 person and 1 group rodney Kopelman_Group
  • Measurement of anisotropic Brownian motion near an interface by evanescent light-scattering spectroscopy
    Physical Review E, Vol. 58, No. 5. (November 1998), 6275.
    by M Hosoda, K Sakai, K Takagi
    posted to thesis by ssfeldman on 2008-03-19 08:15:27 as ** along with 1 person and 1 group rodney Kopelman_Group
  • Confined Brownian motion
    Physical Review E, Vol. 49, No. 6. (June 1994), 5158.
    by Luc P Faucheux, Albert J Libchaber
    posted to no-tag by ssfeldman on 2008-03-19 07:36:51 as ** along with 1 person and 1 group rodney Kopelman_Group
  • Balls and Chains--A Mesoscopic Approach to Tethered Protein Domains
    Biophys. J., Vol. 91, No. 7. (1 October 2006), pp. 2383-2392.
    by Bernhard Windisch, Dennis Bray, Thomas Duke
    posted to no-tag by ssfeldman on 2008-03-19 07:26:29 as ** along with 2 people and 1 group pdelosri kupopo EPFL_SB_ITP_LBS
  • Volume-Exclusion Effects in Tethered-Particle Experiments: Bead Size Matters
    Physical Review Letters, Vol. 96, No. 8. (2006)
    by Darren E Segall, Philip C Nelson, Rob Phillips
    posted to thesis by ssfeldman on 2008-03-18 10:27:54 as read
  • Measurement of colloidal forces with TIRM
    Advances in Colloid and Interface Science, Vol. 82, No. 1-3. (1 October 1999), pp. 93-125.
    by Dennis C Prieve
    posted to no-tag by ssfeldman on 2008-03-16 21:19:57 as **
  • Detection of Non-Brownian Diffusion in the Cell Membrane in Single Molecule Tracking
    Biophys. J., Vol. 88, No. 3. (1 March 2005), pp. 2266-2277.
    by Ken Ritchie, Xiao-Yuan Shan, Junko Kondo, Kokoro Iwasawa, Takahiro Fujiwara, Akihiro Kusumi
    posted to no-tag by ssfeldman on 2008-03-16 21:14:12 as **
  • Three-Dimensional Characterization of Tethered Microspheres by Total Internal Reflection Fluorescence Microscopy
    Biophys. J., Vol. 89, No. 2. (1 August 2005), pp. 1272-1281.
    by Seth Blumberg, Arivalagan Gajraj, Matthew W Pennington, Jens-Christian Meiners
    posted to no-tag by ssfeldman on 2008-03-16 21:03:24 as read
  • Analysis of Kinetics in Noisy Systems: Application to Single Molecule Tethered Particle Motion
    Biophys. J., Vol. 93, No. 1. (1 July 2007), pp. 21-36.
    by F Vanzi, L Sacconi, FS Pavone
    posted to no-tag by ssfeldman on 2008-03-16 21:02:29 as **** along with 1 person and 1 group skoch3 Koch_Lab
  • Quantitative study of polymer conformation and dynamics by single-particle tracking.
    Biophys J, Vol. 76, No. 3. (March 1999), pp. 1598-1605.
    by H Qian, EL Elson
    posted to thesis by ssfeldman on 2008-03-16 18:40:31 as ***
  • Single-particle tracking for DNA tether length monitoring
    Nucl. Acids Res., Vol. 32, No. 9. (20 May 2004), e73.
    by Noelle Pouget, Cynthia Dennis, Catherine Turlan, Mikhail Grigoriev, Michael Chandler, Laurence Salome
    posted to thesis by ssfeldman on 2008-03-15 08:52:19 as ****
  • Effect of the Wall on the Velocity Autocorrelation Function and Long-Time Tail of Brownian Motion
    J. Phys. Chem. B, Vol. 109, No. 45. (17 November 2005), pp. 21406-21412.
    by BU Felderhof
    posted to thesis by ssfeldman on 2008-03-14 14:11:47 as read
  • Observation of a long-time tail in Brownian motion
    Journal of Physics A: Mathematical and General, Vol. 14, No. 12. (1981), pp. 3301-3327.
    by GL Paul, PN Pusey
    posted to thesis by ssfeldman on 2008-03-14 14:11:18 as **
  • Direct observation of nondiffusive motion of a Brownian particle.
    Phys Rev Lett, Vol. 95, No. 16. (14 October 2005)
    by B Lukić, S Jeney, C Tischer, AJ Kulik, L Forró, EL Florin
    posted to thesis by ssfeldman on 2008-03-14 14:02:03 as read
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