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stajich's paml [5 articles]

Recent papers added to stajich's library classified by the tag paml. You can also see everyone's paml.
  • PAML: a program package for phylogenetic analysis by maximum likelihood.
    Comput Appl Biosci, Vol. 13, No. 5. (October 1997), pp. 555-556.
    by Z Yang
    posted to coccipaper codon_model methods molecular_evolution paml phylogenetics by stajich on 2008-04-19 21:34:23 as ** along with 11 people and 3 groups bjorns chrn chad_davis indigoviolet penka BioNica pv usagi-kirin jmjimenez tharris skumagai EisenLab Nie Berkeley Mycology
  • Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.
    Mol Biol Evol, Vol. 19, No. 6. (June 2002), pp. 908-917.
    by Z Yang, R Nielsen
    posted to coccipaper codon_model molecular_evolution paml selection selection_test by stajich on 2008-04-19 21:31:03 as ** along with 3 people and 2 groups stevanspringer operon Garamonfok FAB-lab Berkeley Mycology
  • Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection
    Molecular Biology and Evolution, Vol. 22, No. 4. (April 2005), pp. 1107-1118.
    by Ziheng Yang, Wendy S Wong, Rasmus Nielsen
    posted to coccipaper codon_model molecular_evolution paml positive_selecion selection selection_test by stajich on 2008-04-19 21:29:42 as ** along with 6 people and 1 group rabu BioNica Natasha Garamonfok skumagai CharlesM Berkeley Mycology
  • PAML 4: Phylogenetic Analysis by Maximum Likelihood
    Mol Biol Evol (4 May 2007), msm088.
    by Ziheng Yang
    posted to coccipaper codon_model molecular_evolution paml selection selection_test by stajich on 2008-04-19 21:29:02 as ** along with 8 people and 1 group operon akifumi hdopazo BioNica ryanraaum RamuAnandakrishnan CharlesM Ema Berkeley Mycology
  • Mutation-Selection Models of Codon Substitution and Their Use to Estimate Selective Strengths on Codon Usage.
    Mol Biol Evol (3 January 2008)
    by Ziheng Yang, Rasmus Nielsen
    posted to codon_model molecular_evolution paml selection selection_test by stajich on 2008-04-19 21:28:47 as ** along with 2 people and 1 group cjeans gjuggler Berkeley Mycology
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