stharward's library 361 articles Export

	Bioinformatics and Medical Informatics: Collaborations on the Road to Genomic Medicine? [My Copy] J Am Med Inform Assoc, Vol. 10, No. 6. (1 November 2003), pp. 515-522. by Victor Maojo, Casimir A. Kulikowski posted to opinion by stharward on 2009-11-20 16:52:42 as along with 1 person and 1 group henk-cul dbmi-nlp
	A new paradigm for drug discovery: integrating clinical, genetic, genomic and molecular phenotype data to identify drug targets. [My Copy] Biochemical Society transactions, Vol. 31, No. 2. (April 2003), pp. 437-443. by E. E. Schadt, S. A. Monks, S. H. Friend posted to qtl drug-discovery by stharward on 2009-11-20 14:22:51 as along with 4 people nns1987 roboonya coldmeadow guhjy
	Learning sparse metrics via linear programming [My Copy] In KDD '06: Proceedings of the 12th ACM SIGKDD international conference on Knowledge discovery and data mining (2006), pp. 367-373. by Rómer Rosales, Glenn Fung posted to machine-learning by stharward on 2009-11-19 22:19:05 as along with 1 person sdvillal
	Toward Integrating Feature Selection Algorithms for Classification and Clustering [My Copy] IEEE Transactions on Knowledge and Data Engineering, Vol. 17, No. 4. (April 2005), pp. 491-502. by Huan Liu, Lei Yu posted to machine-learning feature-selection cluster-analysis by stharward on 2009-11-19 21:43:32 as along with 6 people Jaldert sona sdvillal javo_eupla amargoli zhengzhong
	Novel Unsupervised Feature Filtering of Biological Data [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006), pp. e507-513. by Roy Varshavsky, Assaf Gottlieb, Michal Linial, David Horn posted to machine-learning feature-selection by stharward on 2009-11-19 21:41:10 as along with 3 people VGreiff bertelsen jfr
	Reducing a Biomarkers List via Mathematical Programming: Application to Gene Signatures to Detect Time-Dependent Hypoxia in Cancer [My Copy] Machine Learning and Applications, Fourth International Conference on In Fourth International Conference on Machine Learning and Applications, Vol. 0 (2007), pp. 482-487. by Glenn Fung, Renaud, Sriram Krishnan, R. Bharat Rao, Brad G. Wouters, Philippe Lambin posted to feature-selection by stharward on 2009-11-19 19:17:10 as
	Optimizing the use of open-source software applications in drug discovery [My Copy] Drug Discovery Today, Vol. 11, No. 3-4. (February 2006), pp. 127-132. by W. Geldenhuys, K. Gaasch, M. Watson, D. Allen, C. Vanderschyf posted to software review open-source computational-chemistry by stharward on 2009-11-12 20:12:48 as along with 3 people operon nicklynch ramensky
	Interactive modelling and simulation of biochemical networks [My Copy] Computers in Biology and Medicine, Vol. 25, No. 3. (May 1995), pp. 321-334. by R. Hofestadt, Frank Meineke posted to systems-biology software metabolic-pathways by stharward on 2009-11-12 16:54:12 as
	Quantitative modeling of biochemical networks. [My Copy] In silico biology, Vol. 1, No. 1. (1998), pp. 39-53. by R. Hofestädt, S. Thelen posted to systems-biology metabolic-pathways gene-regulation-networks by stharward on 2009-11-12 16:50:44 as along with 1 person wnpx
	EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism [My Copy] Nucl. Acids Res., Vol. 25, No. 1. (1 January 1997), pp. 43-51. by P. D. Karp, M. Riley, S. M. Paley, A. Pellegrini-Toole, M. Krummenacker posted to metabolic-pathways graph-drawing e-coli database by stharward on 2009-11-11 20:49:40 as
	Computation with the KEGG pathway database [My Copy] Biosystems, Vol. 47, No. 1-2. (07 June 1998), pp. 119-128. by H. Ogata, S. Goto, W. Fujibuchi, M. Kanehisa posted to metabolic-pathways interaction-networks graph-drawing database by stharward on 2009-11-11 20:46:23 as
	Simultaneous Multianalyte ELISA Performed on a Microarray Platform [My Copy] Clin Chem, Vol. 47, No. 8. (1 August 2001), pp. 1451-1457. by Rick Wiese, Yuri Belosludtsev, Tom Powdrill, Patricia Thompson, Mike Hogan posted to microarray elisa by stharward on 2009-11-11 19:25:53 as
	Micromosaic Immunoassays [My Copy] Analytical Chemistry, Vol. 73, No. 1. (1 January 2001), pp. 8-12. by Andre Bernard, Bruno Michel, Emmanuel Delamarche posted to microfluidics elisa by stharward on 2009-11-11 19:14:33 as along with 1 person bescarff
	Detection of Y chromosome by in situ hybridization in combination with membrane antigens by two-color immunofluorescence. [My Copy] Laboratory investigation; a journal of technical methods and pathology, Vol. 64, No. 5. (May 1991), pp. 623-628. by H. van den Berg, J. M. Vossen, R. Langlois van den Bergh, J. Bayer, M. J. van Tol posted to in-situ-hybridization fluorescence-microscopy by stharward on 2009-11-09 16:08:48 as
	Combined Automatic Immunological and Molecular Cytogenetic Analysis Allows Exact Identification and Quantification of Tumor Cells in the Bone Marrow [My Copy] Clinical Cancer Research, Vol. 7, No. 7. (July 2001), pp. 1969-1975. by Gabor Mehes, Andrea Luegmayr, Inge M. Ambros, Ruth Ladenstein, Peter F. Ambros posted to in-situ-hybridization fluorescence-microscopy cancer by stharward on 2009-11-09 15:47:12 as
	Fluorescence in situ hybridization: past, present and future [My Copy] J Cell Sci, Vol. 116, No. 14. (15 July 2003), pp. 2833-2838. by Jeffrey M. Levsky, Robert H. Singer posted to review in-situ-hybridization by stharward on 2009-11-09 15:42:54 as along with 1 person emb51
	A hybrid recurrent neural network model for yeast production monitoring and control in a wine base medium [My Copy] Journal of Biotechnology, Vol. 55, No. 3. (4 July 1997), pp. 157-169. by P. Teissier, B. Perret, E. Latrille, J. M. Barillere, G. Corrieu posted to process-control neural-network fermentation by stharward on 2009-11-06 18:15:34 as
	Robust DNA microarray image analysis [My Copy] Machine Vision and Applications, Vol. 15, No. 1. (1 October 2003), pp. 11-28. by Norbert Brandle, Horst Bischof, Hilmar Lapp posted to microarray image-analysis data-preprocessing by stharward on 2009-11-06 16:23:08 as
	Robust adaptive spot segmentation of DNA microarray images [My Copy] Pattern Recognition, Vol. 36, No. 5. (May 2003), pp. 1251-1254. by Alan W. Liew, Hong Yan, Mengsu Yang posted to microarray image-analysis data-preprocessing by stharward on 2009-11-06 16:21:37 as
	Population exposure to VHF and UHF broadcast radiation in the united states [My Copy] Proceedings of the IEEE, Vol. 68, No. 1. (28 January 1980), pp. 6-12. by R. A. Tell, E. D. Mantiply posted to radio radiation exposure-modeling environmental by stharward on 2009-11-05 20:24:35 as
	Biofuel alternatives to ethanol: pumping the microbial well [My Copy] Trends in Biotechnology, Vol. 26, No. 7. (July 2008), pp. 375-381. by J. Fortman, S. Chhabra, A. Mukhopadhyay, et al.H. Chou, T. Lee, E. Steen, J. Keasling posted to review metabolic-pathways biofuel biodiesel by stharward on 2009-11-03 16:15:41 as
	Possible methods for biodiesel production [My Copy] Renewable and Sustainable Energy Reviews, Vol. 11, No. 6. (August 2007), pp. 1300-1311. by J. Marchetti, V. Miguel, A. Errazu posted to review biofuel biodiesel by stharward on 2009-11-03 16:08:55 as
	Towards improved penicillin fermentation via artificial neural networks [My Copy] Computers & Chemical Engineering, Vol. 16, No. 4. (April 1992), pp. 283-291. by C. Di Massimo, G. A. Montague, M. J. Willis, M. T. Tham, A. J. Morris posted to process-control penicillin neural-network fermentation by stharward on 2009-11-03 15:27:51 as
	Microarray data analysis: from disarray to consolidation and consensus. [My Copy] Nature reviews. Genetics, Vol. 7, No. 1. (01 January 2006), pp. 55-65. by David B. Allison, Xiangqin Cui, Grier P. Page, Mahyar Sabripour posted to statistical-analysis review microarray data-preprocessing best-practices by stharward on 2009-10-30 17:54:51 as along with 31 people and 3 groups antonkratz ipark-kaist svozil bertelsen Stew daforerog winterschlaefer verdicchio guhjy barry textoris jfr Ayest balicea sterovetta lhonigberg acidwizard ronaldozhou vpschulz rmk schuylrp Garamonfok debasis GeeSharpMinor dimatura heliopais shikin minostro giovenko jo_davies aviad_work Bioinformatics - CRUK structural_bioinformatics Bioinformatics
	Fundamentals of experimental design for cDNA microarrays [My Copy] Nature Genetics, Vol. 32 Suppl (01 December 2002), pp. 490-495. by Gary A. Churchill posted to microarray experimental-design best-practices by stharward on 2009-10-30 16:50:50 as along with 3 people kittipat pengchy stsaft
	Photodynamic therapy [My Copy] J Clin Oncol, Vol. 6, No. 2. (1 February 1988), pp. 380-391. by M. J. Manyak, A. Russo, P. D. Smith, E. Glatstein posted to review photodynamic-therapy cancer by stharward on 2009-10-29 17:36:04 as
	Photoradiation Therapy for the Treatment of Malignant Tumors [My Copy] Cancer Res, Vol. 38, No. 8. (1 August 1978), pp. 2628-2635. by Thomas J. Dougherty, Jerome E. Kaufman, Abraham Goldfarb, Kenneth R. Weishaupt, Donn Boyle, Arnold Mittleman posted to photodynamic-therapy cancer by stharward on 2009-10-29 17:31:38 as
	Use of within-array replicate spots for assessing differential expression in microarray experiments [My Copy] Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 2067-2075. by Gordon K. Smyth, Joelle Michaud, Hamish S. Scott posted to microarray data-preprocessing by stharward on 2009-10-29 16:10:11 as along with 1 person RMGraze
	Fundamentals of cDNA microarray data analysis [My Copy] Trends in Genetics, Vol. 19, No. 11. (November 2003), pp. 649-659. by Yuk F. Leung, Duccio Cavalieri posted to tutorial statistical-analysis microarray data-preprocessing by stharward on 2009-10-29 16:02:30 as
	Laser-tissue interaction modeling with LATIS. [My Copy] Applied optics, Vol. 36, No. 34. (1 December 1997), pp. 9068-9074. by R. A. London, M. E. Glinsky, G. B. Zimmerman, D. S. Bailey, D. C. Eder, S. L. Jacques posted to software laser hyperthermia computational by stharward on 2009-10-29 15:11:39 as
	A theoretical comparison of energy sources - microwave, ultrasound and laser - for interstitial thermal therapy [My Copy] Physics in Medicine and Biology, Vol. 43, No. 12. (1998), pp. 3535-3547. by Matthew G. Skinner, Megumi N. Iizuka, Michael C. Kolios, Michael D. Sherar posted to laser hyperthermia computational cancer by stharward on 2009-10-29 15:02:26 as
	Simulations of temperature field induced by laser in biological tissue [My Copy] Thermal Treatment of Tissue: Energy Delivery and Assessment In Proc SPIE, Vol. 4247, No. 1. (2001), pp. 7-11. by Shengyou Qian, Da Xing edited by Thomas P. Ryan posted to laser hyperthermia computational by stharward on 2009-10-29 14:48:14 as
	CFD as a Design Tool for Fixed-Bed Reactors [My Copy] Industrial & Engineering Chemistry Research, Vol. 40, No. 23. (1 November 2001), pp. 5246-5254. by Anthony G. Dixon, Michiel Nijemeisland posted to reactor cfd by stharward on 2009-10-29 14:17:50 as
	A standard curve based method for relative real time PCR data processing [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005), 62. by Alexey Larionov, Andreas Krause, William Miller posted to quantitative-pcr data-preprocessing by stharward on 2009-10-27 20:43:09 as along with 1 person sebastien_vigneau
	Integrating genotype and phenotype information: an overview of the PharmGKB project [My Copy] The pharmacogenomics journal, Vol. 1, No. 3. (2001), pp. 167-170. by T. E. Klein, J. T. Chang, M. K. Cho, et al.K. L. Easton, R. Fergerson, M. Hewett, Z. Lin, Y. Liu, S. Liu, D. E. Oliver, D. L. Rubin, F. Shafa, J. M. Stuart, R. B. Altman posted to pharmacogenmoics database by stharward on 2009-10-22 18:19:37 as along with 1 person elsiatcase
	Can We Learn To Distinguish between “Drug-like” and “Nondrug-like” Molecules? [My Copy] Journal of Medicinal Chemistry, Vol. 41, No. 18. (1 August 1998), pp. 3314-3324. by Walters P. W. Ajay, Mark A. Murcko posted to neural-network in-silico-screening fingerprinting data-mining by stharward on 2009-10-21 16:53:38 as
	Statistical analysis of the physical properties of the 20 naturally occurring amino acids [My Copy] Journal of Protein Chemistry, Vol. 4, No. 1. (1 February 1985), pp. 23-55. by Akinori Kidera, Yasuo Konishi, Masahito Oka, Tatsuo Ooi, Harold A. Scheraga posted to statistical-analysis pca cluster-analysis amino-acids by stharward on 2009-10-20 20:39:37 as along with 1 person neils
	On the Properties of Bit String-Based Measures of Chemical Similarity [My Copy] Journal of Chemical Information and Computer Sciences, Vol. 38, No. 3. (1 May 1998), pp. 379-386. by Darren R. Flower posted to fingerprinting chemical-structure by stharward on 2009-10-20 15:46:12 as along with 1 person baldigroup
	Prediction of protein folding class using global description of amino acid sequence [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 92, No. 19. (12 September 1995), pp. 8700-8704. by I. Dubchak, I. Muchnik, S. R. Holbrook, S. H. Kim posted to protein-classification fingerprinting by stharward on 2009-10-19 19:32:24 as
	Database Searching for Compounds with Similar Biological Activity Using Short Binary Bit String Representations of Molecules [My Copy] Journal of Chemical Information and Modeling, Vol. 39, No. 5. (27 September 1999), pp. 881-886. by L. Xue, J. W. Godden, J. Bajorath posted to fingerprinting compound-classification chemoinformatics by stharward on 2009-10-19 19:06:40 as
	Searching for molecules with similar biological activity: analysis by fingerprint profiling. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (4-9 January 2000), pp. 566-575. by J. W. Godden, L. Xue, F. L. Stahura, J. Bajorath posted to fingerprinting compound-classification chemoinformatics by stharward on 2009-10-19 18:55:31 as
	Identification of a Preferred Set of Molecular Descriptors for Compound Classification Based on Principal Component Analysis [My Copy] Journal of Chemical Information and Computer Sciences, Vol. 39, No. 4. (1 July 1999), pp. 699-704. by Ling Xue, Jeff Godden, Hua Gao, Jurgen Bajorath posted to pca fingerprinting feature-selection compound-classification by stharward on 2009-10-19 18:53:47 as along with 1 person ankur_iitg
	Statistical Methods and Insights for Protein and DNA Sequences [My Copy] Annual Review of Biophysics and Biophysical Chemistry, Vol. 20, No. 1. (1991), pp. 175-203. by S. Karlin, P. Bucher, V. Brendel, S. F. Altschul posted to sequence-pattern-recognition sequence-alignment review amino-acids by stharward on 2009-10-19 14:43:02 as
	A unifying concept for the amino acid code [My Copy] Bulletin of Mathematical Biology, Vol. 46, No. 2. (1 March 1984), pp. 187-203. by Rosemarie Swanson posted to gray-code computational character-encoding by stharward on 2009-10-19 14:23:00 as
	The classification of amino acid conservation [My Copy] Journal of Theoretical Biology, Vol. 119, No. 2. (21 March 1986), pp. 205-218. by W. R. Taylor posted to sequence-alignment motif-identification computational amino-acids by stharward on 2009-10-19 13:49:15 as
	What Amino Acid Properties Affect Protein Evolution? [My Copy] Journal of Molecular Evolution, Vol. 47, No. 5. (24 November 1998), pp. 557-564. by Xuhua Xia, Wen-Hsiung Li posted to sequence-stability amino-acids by stharward on 2009-10-17 20:45:40 as
	Mutation matrices and physical-chemical properties: Correlations and implications [My Copy] Proteins: Structure, Function, and Genetics, Vol. 27, No. 3. (1997), pp. 336-344. by Jeffrey M. Koshi, Richard A. Goldstein posted to sequence-stability protein-folding amino-acids by stharward on 2009-10-17 20:37:55 as
	A method to predict functional residues in proteins [My Copy] Nature Structural & Molecular Biology, Vol. 2, No. 2. (01 February 1995), pp. 171-178. by Georg Casari, Chris Sander, Alfonso Valencia posted to sequence-statistics pssm by stharward on 2009-10-17 20:08:04 as
	IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices [My Copy] Bioinformatics, Vol. 15, No. 12. (1 December 1999), pp. 1000-1011. by Alejandro A. Schaffer, Yuri I. Wolf, Chris P. Ponting, Eugene V. Koonin, L. Aravind, Stephen F. Altschul posted to sequence-alignment pssm protein-classification by stharward on 2009-10-17 19:50:42 as along with 1 person chad_davis
	Complementary classification approaches for protein sequences [My Copy] Protein Eng., Vol. 9, No. 5. (1 May 1996), pp. 381-386. by Jason T. L. Wang, Thomas G. Marr, Dennis Shasha, Bruce A. Shapiro, Gung-Wei Chirn, T. Y. Lee posted to protein-classification by stharward on 2009-10-17 19:32:00 as

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review	69
microarray	30
cancer	28
computational	27
comparative-sequence-analysis	25
feature-selection	24
software	24
svm	24
quantitative-pcr	22
algorithmic	21
sequence-pattern-recognition	20
image-analysis	19
machine-learning	19
gene-expression	18
data-preprocessing	17
genome	17
cgh	16
computational-biology	16
sequence-alignment	16
graph-drawing	15
interaction-networks	15
phylogenetics	15
motif-identification	14
copy-number	13
database	13
microrna	12
neural-network	12
in-silico-screening	11
sequence-annotation	11
e-coli	10
fluorescence-microscopy	10
metabolite-prediction	10
protein-structure	10
tutorial	10
bacteria	9
fingerprinting	9
genetic-evolution	9
in-situ-hybridization	9
mass-spectrometry	9
metabolic-pathways	9
model-predictive-control	9
bayesian-classifier	8
cell-motility	8
instrumentation	8
interpolation	8
protein-classification	8
cluster-analysis	7
prion	7
string-kernel	7
disease-prediction	6
drug-discovery	6
numerical-solutions	6
quantum-computing	6
admet	5
amino-acids	5
biofuel	5
data-mining	5
data-visualization	5
sepsis	5
sequence-statistics	5
sequencing-methods	5
statistical-analysis	5
systems-biology	5
website	5
best-practices	4
environmental	4
fluorescence	4
high-throughput-screening	4
light-microscopy	4
molecular-pathology	4
process-control	4
rational-design	4
rna-interference	4
structure-prediction-nucleotides	4
alzheimers	3
biorefinery	3
carryover	3
chemical-structure	3
chemoinformatics	3
chromatography	3
compound-classification	3
gene-identification	3
gfp	3
hmm	3
homology-identification	3
hyperthermia	3
laser	3
lcms	3
melting-curve-analysis	3
nmr	3
normalization	3
protein-folding	3
sequence-search	3
sequence-stability	3
algorithm	2
amyloid	2
analytical	2
biodiesel	2
calibration	2
computational-chemistry	2
dna	2
elisa	2
fermentation	2
fourier-transform	2
inhibitor	2
microfluidics	2
mixture-models	2
multiplex-pcr	2
natural-products	2
neurodegeneration	2
parallel-processing	2
pca	2
photodynamic-therapy	2
proteomics	2
pssm	2
regression	2
rna-structure	2
savitzky-golay	2
signalling-pathways	2
simulation	2
single-cell	2
time-warping	2
analog-computing	1
bioinorganic-chemistry	1
c-elegans	1
cfd	1
character-encoding	1
computer-security	1
computing	1
crystallography	1
cystic-fibrosis	1
data-management	1
dft	1
drosophila	1
dynamic-programming	1
experimental-design	1
exposure-modeling	1
gene-finding	1
gene-regulation	1
gene-regulation-networks	1
genetic-programming	1
glycan	1
glycomics	1
glycoprotein	1
gray-code	1
hardware-acceleration	1
hartree-fock	1
hash-table-search	1
housekeeping-genes	1
intrustion-detection	1
latent-semantic-analysis	1
ligand-binding	1
liquid-handling	1
mammals	1
membrane	1
noise-reduction	1
noncoding-rna	1
open-source	1
opinion	1
particle-physics	1
penicillin	1
pharmacogenmoics	1
pharmacology	1
portal	1
post-hartree-fock	1
protein-kinetics	1
qtl	1
quantum-chemistry	1
radiation	1
radio	1
reactor	1
reference	1
risk-assessment	1
sirna	1
smoothing	1
snp	1
som	1
splines	1
structural-biology	1
structure-prediction-proteins	1
synthetic-biology	1
text-classification	1
therapeutic	1
transformation	1
uv-vis-spectroscopy	1
wavelet-transform	1

stharward's library 361 articles Export

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