sunnytov's library 220 articles Export

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	Hydrogen Bonding of Water to Phosphatidylcholine in the Membrane As Studied by a Molecular Dynamics Simulation: Location, Geometry, and Lipid−Lipid Bridging via Hydrogen-Bonded Water [My Copy] The Journal of Physical Chemistry A, Vol. 101, No. 20. (1 May 1997), pp. 3677-3691. by Marta Pasenkiewicz-Gierula, Yuji Takaoka, Hiroo Miyagawa, Kunihiro Kitamura, Akihiro Kusumi posted to structureanal by sunnytov on 2009-05-28 19:15:00 as
	Cholesterol-containing phosphatidylcholine liposomes: Characterization and use as dispersed phase in electrokinetic capillary chromatography [My Copy] Journal of Separation Science, Vol. 25, No. 7. (2002), pp. 427-437. by Susanne K. Wiedmer, Minttu S. Jussila, Juha M. Holopainen, Juha-Matti Alakoskela, Paavo K. J. Kinnunen, Marja-Liisa Riekkola posted to update2 zetapotential by sunnytov on 2009-04-10 21:48:47 as
	Lipid Diffusion in Giant Unilamellar Vesicles Is More than 2 Times Faster than in Supported Phospholipid Bilayers under Identical Conditions [My Copy] Langmuir, Vol. 22, No. 22. (1 October 2006), pp. 9096-9099. by Magdalena Przybylo, Jan Sykora, Jana Humpoličkova, Ales Benda, Anna Zan, Martin Hof posted to structureanal by sunnytov on 2009-04-12 04:37:03 as
	Perfluorocarbon Emulsions: Stability in vitro and in vivo (A Review) [My Copy] Pharmaceutical Chemistry Journal, Vol. 37, No. 8. (2003), pp. 415-420. by I. N. Kuznetsova posted to nanoemulsion by sunnytov on 2008-01-15 02:48:20 as
	Electrokinetic effects in membrane pores and the determination of zeta-potential [My Copy] Journal of Membrane Science, Vol. 140, No. 2. (18 March 1998), pp. 267-273. by Richard W. Bowen, Xiaowei Cao posted to zetapotential by sunnytov on 2007-08-07 20:49:48 as
	Structure, Location, and Lipid Perturbations of Melittin at the Membrane Interface [My Copy] Biophys. J., Vol. 80, No. 2. (1 February 2001), pp. 801-811. by Kalina Hristova, Christopher E. Dempsey, Stephen H. White posted to pfobpaper br_trp_quenching by sunnytov on 2007-08-02 01:14:23 as
	Coarse-grained molecular dynamics simulations of membrane proteins and peptides [My Copy] Journal of Structural Biology, Vol. 157, No. 3. (20 March 2007), pp. 593-605. by Peter .. Bond,, John Holyoake,, Anthony Ivetac,, Syma Khalid,, Mark .. P. .. Sansom, posted to cg_protein by sunnytov on 2007-07-27 17:30:10 as along with 5 people loison krapnik paulschlesinger dimka choonpeng
	Molecular Dynamics Simulations of Lipid Vesicle Fusion in Atomic Detail [My Copy] Biophys. J., Vol. 92, No. 12. (15 June 2007), pp. 4254-4261. by Volker Knecht, Siewert-Jan Marrink posted to cg_membfusion by sunnytov on 2007-07-27 17:08:27 as along with 1 person softsimu
	Temperature- and ionic strength-induced conformational changes in the lipid head group region of liposomes as suggested by zeta potential data [My Copy] Biophysical Chemistry, Vol. 41 (1991), pp. 175-183. by Kimiko Makino, Takeshi Yamada, Mariko Kimura, Takashi Oka, Hiroyuki Ohshima, Tamotsu Kondo posted to zetapotential pfobpaper by sunnytov on 2007-07-05 23:22:29 as
	Comparison of the Structures of Dimyristoylphosphatidylcholine in the Presence and Absence of Cholesterol by Molecular Dynamics Simulations [My Copy] The Journal of Physical Chemistry, Vol. 100, No. 39. (1 January 1996), pp. 15942-15946. by Razif R. Gabdoulline, Garret Vanderkooi, Chong Zheng posted to pfobpaper lipid_membrane by sunnytov on 2009-12-17 21:39:14 as
	Molecular Simulation of Dioleoylphosphatidylcholine Lipid Bilayers at Differing Levels of Hydration [My Copy] Biophysical Journal, Vol. 81, No. 6. (December 2001), pp. 3005-3015. by R MASHL, posted to simulationconditions pfobpaper by sunnytov on 2009-12-17 21:13:45 as
	Electrostatic potential of bilayer lipid membranes with the structural surface charge smeared perpendicular to the membrane-solution interface. An extension of the Gouy-Chapman diffuse double layer theory [My Copy] The Journal of Physical Chemistry, Vol. 85, No. 12. (1 June 1981), pp. 1762-1767. by Gregor Cevc, Sasa Svetina, Bostjan Zeks posted to pfobpaper membrane_potential by sunnytov on 2009-12-17 20:15:06 as along with 1 person sobolevnrm
	Calculation of the electrostatic potential of lipid bilayers from molecular dynamics simulations: Methodological issues [My Copy] The Journal of Chemical Physics, Vol. 130, No. 21. (2009), 215107. by Andrey A. Gurtovenko, Ilpo Vattulainen posted to pfobpaper membrane_potential by sunnytov on 2009-12-15 21:31:32 as along with 2 people sobolevnrm agrossfield
	Molecular dynamics study of a phospholipid monolayer at a water/triglyceride interface: towards lipid emulsion modelling [My Copy] Chemistry and Physics of Lipids, Vol. 157, No. 2. (February 2009), pp. 86-93. by G HENNERE,, P PROGNON,, F BRION,, I NICOLIS, posted to pfobpaper nanoemulsion by sunnytov on 2009-12-15 21:13:46 as along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
	On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models [My Copy] Phys. Chem. Chem. Phys., Vol. 11, No. 12. (28 March 2009), pp. 1934-1941. by Moritz Winger, Daniel Trzesniak, Riccardo Baron, Wilfred F. Gunsteren posted to simulationconditions cg_model by sunnytov on 2009-12-15 19:59:22 as along with 5 people and 1 group arnaucordomi patvarilly sobolevnrm mbeeby flbarroso baker-group
	Membrane lipids: where they are and how they behave [My Copy] Nature Reviews Molecular Cell Biology, Vol. 9, No. 2. (01 February 2008), pp. 112-124. by Gerrit van Meer, Dennis R. Voelker, Gerald W. Feigenson posted to membrane_fusion lipid_composition cholesterol by sunnytov on 2009-12-15 18:25:18 as along with 4 people jporternj jakeashcraft guhjy paulschlesinger
	Cell membrane lipid composition and distribution: implications for cell function and lessons learned from photoreceptors and platelets [My Copy] J Exp Biol, Vol. 200, No. 23. (1 December 1997), pp. 2927-2936. by K. Boesze-Battaglia, R. Schimmel posted to membrane_fusion lipid_composition cholesterol by sunnytov on 2009-12-15 18:19:58 as
	Effect of Plasma Membrane Lipid Composition on Cellular Susceptibility of Virus-induced Cell Function [My Copy] J. gen. Virol., Vol. 17 (1972), pp. 133-136. by G. Poste, P. Reeve, D. J. Alexander, G. Terry posted to membrane_fusion lipid_composition cholesterol by sunnytov on 2009-12-15 18:15:05 as
	Coarse-Grained Simulation Studies of Peptide-Induced Pore Formation☆ [My Copy] Biophysical Journal, Vol. 95, No. 9. (01 November 2008), pp. 4163-4173. by G ILLYA,, M DESERNO, posted to melittin_sims by sunnytov on 2009-12-15 03:38:45 as along with 3 people edws agrossfield paulschlesinger
	Lipid Bilayer Deformation and the Free Energy of Interaction of a Kv Channel Gating-Modifier Toxin☆ [My Copy] Biophysical Journal, Vol. 95, No. 8. (15 October 2008), pp. 3816-3826. by C WEE,, D GAVAGHAN,, M SANSOM, posted to potentialofmeanforce membrane_fusion by sunnytov on 2009-12-15 03:23:20 as along with 1 person agrossfield
	Defective insulin receptor activation and altered lipid rafts in Niemann–Pick type C disease hepatocytes [My Copy] Biochemical Journal, Vol. 391 (2005), pp. 465-472. by Saara Vainio, Igor Bykov, Martin Hermansson, Eija Iokitalo, Pentti Somerharju, Elina Ikonene posted to cholesterol by sunnytov on 2009-12-14 19:42:35 as
	Plasma membranes contain half the phospholipid and 90% of the cholesterol and sphingomyelin in cultured human fibroblasts. [My Copy] Journal of Biological Chemistry, Vol. 264, No. 7. (5 March 1989), pp. 3786-3793. by Y. Lange, M. H. Swaisgood, B. V. Ramos, T. L. Steck posted to cholesterol by sunnytov on 2009-12-14 19:39:57 as
	A Novel Site-Targeted Ultrasonic Contrast Agent With Broad Biomedical Application [My Copy] Circulation, Vol. 94, No. 12. (15 December 1996), pp. 3334-3340. by Gregory M. Lanza, Kirk D. Wallace, Michael J. Scott, et al.William P. Cacheris, Dana R. Abendschein, Donald H. Christy, Angela M. Sharkey, James G. Miller, Patrick J. Gaffney, Samuel A. Wickline posted to ultrasound pfobpaper by sunnytov on 2009-12-14 18:02:29 as
	Molecular Imaging of Angiogenesis in Nascent Vx-2 Rabbit Tumors Using a Novel alphanubeta3-targeted Nanoparticle and 1.5 Tesla Magnetic Resonance Imaging [My Copy] Cancer Res, Vol. 63, No. 18. (15 September 2003), pp. 5838-5843. by Patrick M. Winter, Shelton D. Caruthers, Andrea Kassner, et al.Thomas D. Harris, Lori K. Chinen, John S. Allen, Elizabeth K. Lacy, Huiying Zhang, J. David Robertson, Samuel A. Wickline, Gregory M. Lanza posted to pfobpaper by sunnytov on 2009-12-14 17:53:05 as along with 1 person ml115
	Liquid Perfluorocarbons as Contrast Agents for Ultrasonography and 19F-MRI [My Copy] Pharmaceutical Research (2009) by Raquel Díaz-López, Nicolas Tsapis, Elias Fattal posted to ultrasound ultrasonography pfobpaper by sunnytov on 2009-12-14 17:34:12 as
	Perfluorooctyl Bromide Polymeric Capsules as Dual Contrast Agents for Ultrasonography and Magnetic Resonance Imaging [My Copy] Advanced Functional Materials, Vol. 18, No. 19. (2008), pp. 2963-2971. by Emilia Pisani, Nicolas Tsapis, Belfor Galaz, et al.Mathieu Santin, Romain Berti, Nicolas Taulier, Erol Kurtisovski, Olivier Lucidarme, Michèle Ourevitch, Bich T. Doan, Jean C. Beloeil, Brigitte Gillet, Wladimir Urbach, S. Lori Bridal, Elias Fattal posted to pfobpaper nanoemulsion by sunnytov on 2009-12-14 17:08:59 as
	A Review of Therapeutic Ultrasound: Effectiveness Studies -- Robertson and Baker 81 (7): 1339 -- Physical Therapy [My Copy] Physical Therapy, Vol. 81, No. 7. (2001), pp. 1339-1350. by V. J. Robertson, K. G. Baker posted to ultrasound by sunnytov on 2009-12-12 00:43:54 as
	A phantom feasibility study of acoustic enhanced drug perfusion in neurological tissue [My Copy] Life Science Systems and Applications Workshop, 2007. LISA 2007. IEEE/NIH (9 November 2007), pp. 67-70. by G. K. Lewis, W. Olbricht posted to ultrasound by sunnytov on 2009-12-12 00:41:53 as
	How membrane chain melting properties are regulated by the polar surface of the lipid bilayer [My Copy] In Biochemistry, Vol. 26, No. 20. (1 October 1987), pp. 6305-6310. by Gregor Cevc posted to pfobpaper by sunnytov on 2009-12-09 17:23:22 as
	Hydrophobic mismatch between proteins and lipids in membranes [My Copy] Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes, Vol. 1376, No. 3. (10 November 1998), pp. 401-415. by J KILLIAN, posted to pfobpaper by sunnytov on 2009-12-08 06:10:03 as
	Fluorocarbon Emulsions as in vivo Oxygen Delivery Systems: Background and Chemistry [My Copy] In Blood Substitutes (09 November 2006), pp. 259-275. by Jean G. Riess, Marie P. Krafft edited by Robert M. Winslow posted to pfobpaper by sunnytov on 2009-12-08 05:54:42 as along with 1 person sbaete
	Local anesthetics and pressure: a comparison of dibucaine binding to lipid monolayers and bilayers [My Copy] Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 899, No. 2. (29 May 1987), pp. 196-204. by A SEELIG, posted to pfobpaper by sunnytov on 2009-12-08 01:34:20 as
	Systematically convergent basis sets with relativistic pseudopotentials. II. Small-core pseudopotentials and correlation consistent basis sets for the post-d group 16--18 elements [My Copy] The Journal of Chemical Physics, Vol. 119, No. 21. (2003), pp. 11113-11123. by Kirk A. Peterson, Detlev Figgen, Erich Goll, Hermann Stoll, Michael Dolg posted to united_ff_param pfobpaper by sunnytov on 2009-12-07 23:16:09 as
	Atomic charges derived from semiempirical methods [My Copy] Journal of Computational Chemistry, Vol. 11, No. 4. (1990), pp. 431-439. by Brent H. Besler, Kenneth M. Merz, Peter A. Kollman posted to united_ff_param pfobpaper by sunnytov on 2009-12-07 23:12:54 as along with 2 people and 1 group A_Coletta_Thesis dfgreen Structural Biology Group TorVergata
	Lipid droplet-organelle interactions; sharing the fats [My Copy] Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, Vol. 1791, No. 6. (June 2009), pp. 441-447. by Samantha Murphy,, Sally Martin,, Robert .. Parton, posted to pfobpaper membrane_fusion by sunnytov on 2009-12-04 17:50:45 as along with 1 person paulschlesinger
	Observation of a Membrane Fusion Intermediate Structure [My Copy] Science In Science, Vol. 297, No. 5588. (13 September 2002), pp. 1877-1879. by Lin Yang, Huey W. Huang posted to pfobpaper membrane_fusion by sunnytov on 2009-12-04 17:49:42 as along with 2 people ts3435 softsimu
	Gadolinium-modulated <SUP><FONT SIZE='-1'>19</FONT></SUP>F signals from perfluorocarbon nanoparticles as a new strategy for molecular imaging [My Copy] Magnetic Resonance in Medicine, Vol. 60, No. 5. (November 2008), pp. 1066-1072. by Anne M. Neubauer, Jacob Myerson, Shelton D. Caruthers, et al.Franklin D. Hockett, Patrick M. Winter, Junjie Chen, Patrick J. Gaffney, J. David Robertson, Gregory M. Lanza, Samuel A. Wickline posted to pfobpaper by sunnytov on 2009-12-02 22:45:06 as along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
	Molecular Dynamics of Liquid Alkanes [My Copy] Faraday Discussions of the Chemical Society, Vol. 66 (1978), pp. 95-106. by J- P. Ryckaert, A. Bellemans posted to pfobpaper by sunnytov on 2009-12-02 20:15:49 as
	Intramembrane Electrostatic Interactions Destabilize Lipid Vesicles [My Copy] Biophysical Journal, Vol. 83, No. 4. (1 October 2002), pp. 2007-2014. by S. Shoemaker, T. Vanderlick posted to pfobpaper by sunnytov on 2009-12-02 17:03:40 as along with 2 people jakeashcraft softsimu
	Performance of the general amber force field in modeling aqueous POPC membrane bilayers [My Copy] Journal of Computational Chemistry, Vol. 28, No. 12. (12 April 2007), pp. 2051-2058. by Balázs Jójárt, Tamás A. Martinek posted to pfobpaper by sunnytov on 2009-12-02 16:59:49 as along with 4 people and 1 group dimka xdeupi easybakemuffin viktor21614 LabCompMed
	Molecular dynamics simulation of unsaturated lipid bilayers at low hydration: parameterization and comparison with diffraction studies. [My Copy] Biophysical journal, Vol. 73, No. 5. (November 1997), pp. 2269-2279. by S. E. Feller, D. Yin, R. W. Pastor, A. D. MacKerell posted to pfobpaper by sunnytov on 2009-12-02 16:55:15 as along with 1 person dimka
	Nonlinear scaling schemes for Lennard-Jones interactions in free energy calculations [My Copy] The Journal of Chemical Physics, Vol. 127, No. 21. (2007), 214108. by Thomas Steinbrecher, David L. Mobley, David A. Case posted to pfobpaper by sunnytov on 2009-12-02 16:46:32 as along with 3 people and 1 group arnaucordomi sobolevnrm dmobley baker-group
	Partial liquid breathing of fluorocarbons [My Copy] US Patent 5655521 (12 August 1997) by Nicholas S. Faithfull, Jeffry G. Weers posted to pfobpaper by sunnytov on 2009-12-02 16:43:36 as
	Chapter 2 Quantifying Uncertainty and Sampling Quality in Biomolecular Simulations [My Copy] In Annual Reports in Computational Chemistry Volume 5, Vol. 5 (2009), pp. 23-48. by Alan Grossfield, Daniel M. Zuckerman posted to pfobpaper by sunnytov on 2009-12-02 16:24:53 as
	INTERACTION MODELS FOR WATER IN RELATION TO PROTEIN HYDRATION [My Copy] In Intermolecular Forces (1981), pp. 331-342. by H. J. C. Berendsen, J. P. M. Postman, W. F. van Gunsteren, J. Hermans edited by B. Pullman posted to pfobpaper by sunnytov on 2009-12-02 16:21:41 as
	Targeted antiproliferative drug delivery to vascular smooth muscle cells with a magnetic resonance imaging nanoparticle contrast agent: implications for rational therapy of restenosis. [My Copy] Circulation, Vol. 106, No. 22. (2002), pp. 2842-2847. by G. M. Lanza, X. Yu, P. M. Winter, et al.D. R. Abendschein, K. K. Karukstis, M. J. Scott, L. K. Chinen, R. W. Fuhrhop, D. E. Scherrer, S. A. Wickline posted to pfobpaper by sunnytov on 2009-12-02 16:03:36 as
	Methodological problems in pressure profile calculations for lipid bilayers [My Copy] The Journal of Chemical Physics, Vol. 122, No. 12. (2005), 124903. by Jacob Sonne, Flemming Y. Hansen, Günther H. Peters posted to pfobpaper by sunnytov on 2009-12-02 00:58:38 as along with 1 person and 1 group sobolevnrm baker-group
	Evaluation and Reparametrization of the OPLS-AA Force Field for Proteins via Comparison with Accurate Quantum Chemical Calculations on Peptides† [My Copy] The Journal of Physical Chemistry B, Vol. 105, No. 28. (1 July 2001), pp. 6474-6487. by George A. Kaminski, Richard A. Friesner, Julian Tirado-Rives, William L. Jorgensen posted to pfobpaper by sunnytov on 2009-12-02 00:48:55 as along with 3 people arifor softsimu LamBras
	Studies of the cavitational effects of clinical ultrasound by sonoluminescence: 1. Correlation of sonoluminescence with the standing wave pattern in an acoustic field produced by a therapeutic unit [My Copy] Physical Medicinal Biology, Vol. 33 (1988), pp. 1239-1248. by T. G. Leightont, M. J. W. Pickworthi, A. G. Waltoni, P. P. Dendyi posted to clinical_ultrasound by sunnytov on 2009-12-01 04:54:58 as
	Interaction of Anesthetics with the Rho GTPase Regulator Rho GDP Dissociation Inhibitor† [My Copy] Biochemistry, Vol. 47, No. 36. (9 September 2008), pp. 9540-9552. by Cojen Ho, Sivananthaperumal Shanmugasundararaj, Keith W. Miller, Steve A. Malinowski, Anthony C. Cook, Simon J. Slater posted to pfobpaper br_trp_quenching by sunnytov on 2009-12-01 02:32:36 as

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pfobpaper	120
update2	46
nanoemulsion	21
br_trp_quenching	13
update	12
membrane_curvature	12
melittin_sims	11
potentialofmeanforce	10
zetapotential	9
structureanal	9
cg_membfusion	8
simulationconditions	6
united_ff_param	6
membrane_fusion	6
cholesterol	5
ionmembixn	4
membrane_potential	4
ultrasound	4
lipid_membrane	3
fumagillin	3
lipid_composition	3
spr	2
cg_protein	1
diffusion	1
ultrasonography	1
dipolepotential	1
simul	1
x_ray	1
cg_model	1
clinical_ultrasound	1

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