Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies. Export

@article{RUD06, abstract = {Event-driven simulation strategies were proposed recently to simulate integrate-and-fire (IF) type neuronal models. These strategies can lead to computationally efficient algorithms for simulating large-scale networks of neurons; most important, such approaches are more precise than traditional clock-driven numerical integration approaches because the timing of spikes is treated exactly. The drawback of such event-driven methods is that in order to be efficient, the membrane equations must be solvable analytically, or at least provide simple analytic approximations for the state variables describing the system. This requirement prevents, in general, the use of conductance-based synaptic interactions within the framework of event-driven simulations and, thus, the investigation of network paradigms where synaptic conductances are important. We propose here a number of extensions of the classical leaky IF neuron model involving approximations of the membrane equation with conductance-based synaptic current, which lead to simple analytic expressions for the membrane state, and therefore can be used in the event-driven framework. These conductance-based IF (gIF) models are compared to commonly used models, such as the leaky IF model or biophysical models in which conductances are explicitly integrated. All models are compared with respect to various spiking response properties in the presence of synaptic activity, such as the spontaneous discharge statistics, the temporal precision in resolving synaptic inputs, and gain modulation under in vivo-like synaptic bombardment. Being based on the passive membrane equation with fixed-threshold spike generation, the proposed gIF models are situated in between leaky IF and biophysical models but are much closer to the latter with respect to their dynamic behavior and response characteristics, while still being nearly as computationally efficient as simple IF neuron models. gIF models should therefore provide a useful tool for efficient and precise simulation of large-scale neuronal networks with realistic, conductance-based synaptic interactions.}, address = {Unit\'{e} de Neuroscience Int\'{e}gratives et Computationnelles, CNRS, 91198 Gif-sur-Yvette, France. Rudolph@iaf.cnrs-gif.fr}, author = {Rudolph, M. and Destexhe, A.}, citeulike-article-id = {869917}, citeulike-linkout-0 = {http://dx.doi.org/10.1162/neco.2006.18.9.2146}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/16846390}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=16846390}, doi = {10.1162/neco.2006.18.9.2146}, issn = {0899-7667}, journal = {Neural Comput}, keywords = {conductance-base, event-driven, integrate-and-fire, model, neural, simulation}, month = {September}, number = {9}, pages = {2146--2210}, posted-at = {2008-06-29 19:32:03}, priority = {0}, title = {Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies.}, url = {http://dx.doi.org/10.1162/neco.2006.18.9.2146}, volume = {18}, year = {2006} }

TY - JOUR ID - RUD06 L3 - citeulike-article-id:869917 N2 - Event-driven simulation strategies were proposed recently to simulate integrate-and-fire (IF) type neuronal models. These strategies can lead to computationally efficient algorithms for simulating large-scale networks of neurons; most important, such approaches are more precise than traditional clock-driven numerical integration approaches because the timing of spikes is treated exactly. The drawback of such event-driven methods is that in order to be efficient, the membrane equations must be solvable analytically, or at least provide simple analytic approximations for the state variables describing the system. This requirement prevents, in general, the use of conductance-based synaptic interactions within the framework of event-driven simulations and, thus, the investigation of network paradigms where synaptic conductances are important. We propose here a number of extensions of the classical leaky IF neuron model involving approximations of the membrane equation with conductance-based synaptic current, which lead to simple analytic expressions for the membrane state, and therefore can be used in the event-driven framework. These conductance-based IF (gIF) models are compared to commonly used models, such as the leaky IF model or biophysical models in which conductances are explicitly integrated. All models are compared with respect to various spiking response properties in the presence of synaptic activity, such as the spontaneous discharge statistics, the temporal precision in resolving synaptic inputs, and gain modulation under in vivo-like synaptic bombardment. Being based on the passive membrane equation with fixed-threshold spike generation, the proposed gIF models are situated in between leaky IF and biophysical models but are much closer to the latter with respect to their dynamic behavior and response characteristics, while still being nearly as computationally efficient as simple IF neuron models. gIF models should therefore provide a useful tool for efficient and precise simulation of large-scale neuronal networks with realistic, conductance-based synaptic interactions. IS - 9 JF - Neural Comput SN - 0899-7667 AD - Unité de Neuroscience Intégratives et Computationnelles, CNRS, 91198 Gif-sur-Yvette, France. Rudolph@iaf.cnrs-gif.fr EP - 2210 TI - Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies. VL - 18 SP - 2146 KW - conductance-base KW - event-driven KW - integrate-and-fire KW - model KW - neural KW - simulation AU - Rudolph, M AU - Destexhe, A PY - 2006/09// UR - http://dx.doi.org/10.1162/neco.2006.18.9.2146 ER -