textoris's puces_adn [54 articles] Export

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	Analysis of gene expression in pathophysiological states: Balancing false discovery and false negative rates [My Copy] PNAS (9 January 2006), 0510115103. by Andrew W. Norris, Ronald C. Kahn posted to analyse pathway puces_adn by textoris on 2006-01-25 13:21:07 as along with 3 people usr jfr tabu
	Systems Analyses Reveal Two Chaperone Networks with Distinct Functions in Eukaryotic Cells [My Copy] Cell, Vol. 124, No. 1. (13 January 2006), pp. 75-88. by Veronique Albanese, Alice Y. Yam, Joshua Baughman, Charles Parnot, Judith Frydman posted to hsp pathway puces_adn by textoris on 2006-01-25 13:18:18 as along with 2 people and 1 group isaacstone nm olfscience
	Mapping long-range chromatin organization within the chicken alpha-globin gene domain using oligonucleotide DNA arrays. [My Copy] Genomics, Vol. 85, No. 1. (January 2005), pp. 143-151. by E. Ioudinkova, A. Petrov, S. V. Razin, Y. S. Vassetzky posted to alpha_globin chromatin dea organization puces_adn by textoris on 2005-09-20 08:54:10 as
	Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. [My Copy] Nucleic Acids Res, Vol. 30, No. 4. (15 February 2002) by Y. H. Yang, S. Dudoit, P. Luu, et al.D. M. Lin, V. Peng, J. Ngai, T. P. Speed posted to puces_adn stat by textoris on 2005-09-18 07:20:57 as along with 6 people surajitray stsaft renatomilani gupton debasis talponer
	Bootstrapping cluster analysis: Assessing the reliability of conclusions from microarray experiments [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 16. (31 July 2001), pp. 8961-8965. by M. Kathleen Kerr, Gary A. Churchill posted to cluster puces_adn stat by textoris on 2005-09-18 07:18:59 as along with 6 people and 1 group poirel nuin ghattem pbellec briordan klo SIMR bioinformatics
	Fundamentals of cDNA microarray data analysis. [My Copy] Trends Genet, Vol. 19, No. 11. (November 2003), pp. 649-659. by Y. F. Leung, D. Cavalieri posted to puces_adn stat by textoris on 2005-09-18 07:15:33 as along with 2 people heliopais tvdbulck
	Statistical issues in cDNA Microarray Data Analysis [My Copy] In Functional Genomics : Methods and protocols (25 June 2002) by G. K. Smyth, Y. H. Yang, T. Speed posted to puces_adn stat by textoris on 2005-09-18 07:12:46 as
	Statistical implications of pooling RNA samples for microarray experiments [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (24 June 2003), 26. by Xuejun Peng, Constance Wood, Eric Blalock, Kuey Chen, Philip Landfield, Arnold Stromberg posted to analyse bioinfo puces_adn stat by textoris on 2005-09-17 15:58:10 as along with 1 person rmk
	Pathways to the analysis of microarray data. [My Copy] Trends in biotechnology, Vol. 23, No. 8. (August 2005), pp. 429-435. by R. Keira Curtis, Matej Oresic, Antonio Vidal-Puig posted to chip puces_adn reseaux by textoris on 2005-08-21 16:58:43 as along with 11 people and 2 groups bertelsen thomaskelder udivi AlexanderPico jfr saman_vp snuppepuppan Ayest tardigrade ealloza heliopais ConklinLab BioinfoCIPF
	Sensitivity issues in DNA array-based expression measurements and performance of nylon microarrays for small samples. [My Copy] Hum Mol Genet, Vol. 8, No. 9. (September 1999), pp. 1715-1722. by F. Bertucci, K. Bernard, B. Loriod, et al.Y. C. Chang, S. Granjeaud, D. Birnbaum, C. Nguyen, K. Peck, B. R. Jordan posted to genomique puces_adn transcriptome by textoris on 2005-06-30 18:54:30 as
	Normalization strategies for cDNA microarrays. [My Copy] Nucleic Acids Res, Vol. 28, No. 10. (15 May 2000) by J. Schuchhardt, D. Beule, A. Malik, et al.E. Wolski, H. Eickhoff, H. Lehrach, H. Herzel posted to genomique normalisation puces_adn stat transcriptome by textoris on 2005-06-30 18:49:04 as along with 1 person talponer
	Cluster analysis and display of genome-wide expression patterns [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 25. (8 December 1998), pp. 14863-14868. by Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein posted to cluster puces_adn stat transcriptome by textoris on 2005-06-30 18:21:00 as along with 34 people and 3 groups antonkratz potatongy drungows colmryan jplatig rsaito Neeperando baldigroup daforerog karinlag ronglais operon Borelli pengchy macowell ggrot miguel okarsligil pcahan1 lfriedl balajis nuke2005 lyongu maryee wnpx nirfriedman dquest karfunkel dps kintoki jo_davies tvdbulck bozdagd roys kdl Bioinformatics BUiGEM
	Statistical significance for hierarchical clustering in genetic association and microarray expression studies. [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (11 December 2003) by M. A. Levenstien, Y. Yang, J. Ott posted to cluster puces_adn stat transcriptome by textoris on 2005-06-30 18:19:39 as along with 1 person jfr
	Comparisons and validation of statistical clustering techniques for microarray gene expression data [My Copy] Bioinformatics, Vol. 19, No. 4. (1 March 2003), pp. 459-466. by Susmita Datta, Somnath Datta posted to puces_adn stat transcriptome by textoris on 2005-06-30 18:18:03 as along with 7 people socwangnan Yanno ujh tvdbulck bertelsen echsberde dps
	A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes. [My Copy] Bioinformatics, Vol. 17, No. 6. (June 2001), pp. 509-519. by P. Baldi, A. D. Long posted to bayes genomique puces_adn stat transcriptome by textoris on 2005-06-30 18:16:00 as along with 9 people and 1 group gstiglic tvdbulck lyongu dquest daniel_quest jeremymiller shigepong jo_davies baldigroup GeschwindLab
	A simple method for statistical analysis of intensity differences in microarray-derived gene expression data. [My Copy] BMC Biotechnol, Vol. 1, No. 1. (2001) by A. Kamb, M. Ramaswami posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 18:32:58 as
	Statistical modeling of large microarray data sets to identify stimulus-response profiles. [My Copy] Proc Natl Acad Sci U S A, Vol. 98, No. 10. (8 May 2001), pp. 5631-5636. by L. P. Zhao, R. Prentice, L. Breeden posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 18:31:52 as
	Ratio statistics of gene expression levels and applications to microarray data analysis. [My Copy] Bioinformatics, Vol. 18, No. 9. (September 2002), pp. 1207-1215. by Y. Chen, V. Kamat, E. R. Dougherty, M. L. Bittner, P. S. Meltzer, J. M. Trent posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 18:30:14 as
	Improving the statistical detection of regulated genes from microarray data using intensity-based variance estimation. [My Copy] BMC Genomics, Vol. 5, No. 1. (27 February 2004) by J. Comander, S. Natarajan, M. A. Gimbrone, G. García-Cardeña posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 18:28:53 as
	Rank Difference Analysis of Microarrays (RDAM), a novel approach to statistical analysis of microarray expression profiling data [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (11 October 2004), 148. by Dietmar Martin, Philippe Demougin, Michael Hall, Michel Bellis posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 18:26:30 as along with 2 people humburg RMGraze
	Arabidopsis gene expression changes during cyst nematode parasitism revealed by statistical analyses of microarray expression profiles. [My Copy] Plant J, Vol. 33, No. 5. (March 2003), pp. 911-921. by D. P. Puthoff, D. Nettleton, S. R. Rodermel, T. J. Baum posted to genomique puces_adn transcriptome by textoris on 2005-06-28 18:25:36 as
	Analysis of microarray gene expression data [My Copy] by Wolfgang Huber, Anja V. Heydebreck, Martin Vingron posted to analyse genomique puces_adn stat transcriptome by textoris on 2005-06-28 17:32:03 as
	On the utility of pooling biological samples in microarray experiments. [My Copy] Proc Natl Acad Sci U S A (8 March 2005) by C Kendziorski, R A A. Irizarry, K-S S. Chen, J D D. Haag, M N N. Gould posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 17:29:06 as along with 4 people guhjy jtextori jfr rmk
	Individuality and variation in gene expression patterns in human blood. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 4. (18 February 2003), pp. 1896-1901. by A. R. Whitney, M. Diehn, S. J. Popper, et al.A. A. Alizadeh, J. C. Boldrick, D. A. Relman, P. O. Brown posted to analyse genomique puces_adn stat transcriptome by textoris on 2005-06-28 17:27:28 as along with 2 people giovanni jo_davies
	Sample size for detecting differentially expressed genes in microarray experiments. [My Copy] BMC Genomics, Vol. 5, No. 1. (8 November 2004) by C. Wei, J. Li, R. E. Bumgarner posted to analyse genomique puces_adn stat transcriptome by textoris on 2005-06-28 17:25:53 as along with 2 people guhjy tvdbulck
	Gene expression profile of murine long-term reconstituting vs. short-term reconstituting hematopoietic stem cells. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 7. (15 February 2005), pp. 2448-2453. by J. F. Zhong, Y. Zhao, S. Sutton, et al.A. Su, Y. Zhan, L. Zhu, C. Yan, T. Gallaher, P. B. Johnston, W. F. Anderson, M. P. Cooke posted to genomique puces_adn transcriptome by textoris on 2005-06-28 17:24:05 as
	Expression scanning of an array of growth control genes in human tumor cell lines. [My Copy] Oncogene, Vol. 18, No. 26. (1 July 1999), pp. 3905-3912. by F. Bertucci, S. Van Hulst, K. Bernard, et al.B. Loriod, S. Granjeaud, R. Tagett, M. Starkey, C. Nguyen, B. Jordan, D. Birnbaum posted to cancer genomique puces_adn transcriptome by textoris on 2005-06-28 17:23:02 as
	Gene expression profiles of poor-prognosis primary breast cancer correlate with survival. [My Copy] Hum Mol Genet, Vol. 11, No. 8. (15 April 2002), pp. 863-872. by F. Bertucci, V. Nasser, S. Granjeaud, et al.F. Eisinger, J. Adelaïde, R. Tagett, B. Loriod, A. Giaconia, A. Benziane, E. Devilard, J. Jacquemier, P. Viens, C. Nguyen, D. Birnbaum, R. Houlgatte posted to cancer genomique puces_adn transcriptome by textoris on 2005-06-28 17:18:41 as along with 1 person Zephyrus
	Biomedical discovery with DNA arrays. [My Copy] Cell, Vol. 102, No. 1. (7 July 2000), pp. 9-15. by R. A. Young posted to genomique puces_adn by textoris on 2005-06-28 17:17:43 as along with 1 person ccr
	Expression profiling using cDNA microarrays. [My Copy] Methods Mol Biol, Vol. 236 (2003), pp. 365-380. by S. Zhao, W. B. Bruce posted to genomique puces_adn transcriptome by textoris on 2005-06-28 17:16:12 as
	Use of transcriptome data to unravel the fine structure of genes involved in sepsis. [My Copy] J Infect Dis, Vol. 187 Suppl 2 (15 June 2003) by B. J. Stevenson, C. Iseli, B. Beutler, C. V. Jongeneel posted to genetique genomique puces_adn sepsis transcriptome by textoris on 2005-06-28 17:11:39 as
	Prediction of cancer outcome with microarrays: a multiple random validation strategy. [My Copy] Lancet, Vol. 365, No. 9458. (11 February 2005), pp. 488-492. by Stefan Michiels, Serge Koscielny, Catherine Hill posted to genomique puces_adn by textoris on 2005-06-28 17:07:00 as along with 9 people and 1 group ptrobajo srp33 aviad_work frohike setar jfr chad_davis giovanni winterschlaefer GeschwindLab
	Microarrays and molecular research: noise discovery? [My Copy] Lancet, Vol. 365, No. 9458. (5 February 2005), pp. 454-455. by J. P. Ioannidis posted to genomique puces_adn transcriptome by textoris on 2005-06-28 17:05:46 as along with 1 person jfr
	Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments [My Copy] by Sandrine Dudoit, Yee H. Yang, Matthew J. Callow, Terence P. Speed posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 17:00:26 as
	Exploration, normalization, and summaries of high density oligonucleotide array probe level data [My Copy] Biostat, Vol. 4, No. 2. (1 April 2003), pp. 249-264. by Rafael A. Irizarry, Bridget Hobbs, Francois Collin, et al.Yasmin D. Beazer-Barclay, Kristen J. Antonellis, Uwe Scherf, Terence P. Speed posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:56:27 as along with 27 people and 4 groups jperkins VGreiff lwaldron shikin jfr YukaH huiminC robert85 emptyhb heliopais giovenko winterschlaefer miguel Dax42 RMGraze fisherp tvdbulck dtc1 vpschulz rmk joepickrell ghattem bertelsen jo_davies waszak bakakaj vertikalist MathBio Bioinformatics Computational_Systems_Biology Systems_Biology
	Statistical methods for microarray assays. [My Copy] J Appl Genet, Vol. 43, No. 3. (2002), pp. 269-278. by P. Krajewski, J. Bocianowski posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:54:20 as
	Significance and statistical errors in the analysis of DNA microarray data. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 20. (1 October 2002), pp. 12975-12978. by James P. Brody, Brian A. Williams, Barbara J. Wold, Stephen R. Quake posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:52:23 as along with 3 people jperkins Ayest jpbrody
	Statistical intelligence: effective analysis of high-density microarray data. [My Copy] Drug Discov Today, Vol. 7, No. 11 Suppl. (1 June 2002) by S. Draghici posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:50:07 as along with 1 person miguel
	Processing and quality control of DNA array hybridization data. [My Copy] Bioinformatics, Vol. 16, No. 11. (November 2000), pp. 1014-1022. by T. Beissbarth, K. Fellenberg, B. Brors, et al.R. Arribas-Prat, J. Boer, N. C. Hauser, M. Scheideler, J. D. Hoheisel, G. Schütz, A. Poustka, M. Vingron posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:48:17 as
	A comparative review of statistical methods for discovering differentially expressed genes in replicated microarray experiments [My Copy] Bioinformatics, Vol. 18, No. 4. (1 April 2002), pp. 546-554. by Wei Pan posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:45:18 as along with 5 people daforerog roys stsaft miguel Schmidtc
	Evaluating test statistics to select interesting genes in microarray experiments. [My Copy] Hum Mol Genet, Vol. 11, No. 19. (15 September 2002), pp. 2223-2232. by C. Kooperberg, S. Sipione, M. LeBlanc, A. D. Strand, E. Cattaneo, J. M. Olson posted to genomique puces_adn stat transcriptome by textoris on 2005-06-28 16:43:15 as along with 2 people statistic01 renatomilani
	Microarray data normalization and transformation [My Copy] Nature Genetics, Vol. 32 Suppl (01 December 2002), pp. 496-501. by John Quackenbush posted to normalisation puces_adn stat transcriptome by textoris on 2005-06-28 16:41:37 as along with 10 people seb1 stharward surajitray daforerog alokm chad_davis schuylrp heliopais frohike bertelsen
	Molecular Signatures of Sepsis : Multiorgan Gene Expression Profiles of Systemic Inflammation [My Copy] Am J Pathol, Vol. 159, No. 4. (1 October 2001), pp. 1199-1209. by Arul M. Chinnaiyan, Markus Huber-Lang, Chandan Kumar-Sinha, et al.Terrence R. Barrette, Sunita Shankar-Sinha, Vidya J. Sarma, Vaishalee A. Padgaonkar, Peter A. Ward posted to genomique puces_adn sepsis transcriptome by textoris on 2005-06-28 05:27:58 as along with 1 person stharward
	Sepsis gene expression profiling: murine splenic compared with hepatic responses determined by using complementary DNA microarrays. [My Copy] Crit Care Med, Vol. 30, No. 12. (December 2002), pp. 2711-2721. by J. P. Cobb, J. M. Laramie, G. D. Stormo, et al.J. J. Morrissey, W. D. Shannon, Y. Qiu, I. E. Karl, T. G. Buchman, R. S. Hotchkiss posted to genomique puces_adn sepsis transcriptome by textoris on 2005-06-28 05:26:18 as
	Expression profiling: toward an application in sepsis diagnostics. [My Copy] Shock, Vol. 22, No. 1. (July 2004), pp. 29-33. by M. Prucha, A. Ruryk, H. Boriss, et al.E. Möller, R. Zazula, I. Herold, R. A. Claus, K. A. Reinhart, P. Deigner, S. Russwurm posted to genomique puces_adn sepsis transcriptome by textoris on 2005-06-28 05:24:52 as
	Application of genome-wide expression analysis to human health and disease. [My Copy] Proc Natl Acad Sci U S A (21 March 2005) by J Perren P. Cobb, Michael N N. Mindrinos, Carol Miller-Graziano, et al.Steve E E. Calvano, Henry V V. Baker, Wenzhong Xiao, Krzysztof Laudanski, Bernard H H. Brownstein, Constance M M. Elson, Douglas L L. Hayden, David N N. Herndon, Stephen F F. Lowry, Ronald V V. Maier, David A A. Schoenfeld, Lyle L L. Moldawer, Ronald W W. Davis, Ronald G G. Tompkins, Henry V V. Baker, Paul Bankey, Timothy Billiar, Bernard H H. Brownstein, Steve E E. Calvano, David Camp, Irshad Chaudry, J Perren P. Cobb, Ronald W W. Davis, Constance M M. Elson, Bradley Freeman, Richard Gamelli, Nicole Gibran, Brian Harbrecht, Douglas L L. Hayden, Wyrta Heagy, David Heimbach, David N N. Herndon, Jureta Horton, John Hunt, Krzysztof Laudanski, James Lederer, Stephen F F. Lowry, Ronald V V. Maier, John Mannick, Bruce McKinley, Carol Miller-Graziano, Michael N N. Mindrinos, Joseph Minei, Lyle L L. Moldawer, Ernest Moore, Frederick Moore, Robert Munford, Avery Nathens, Grant O'keefe, Gary Purdue, Laurence Rahme, Daniel Remick, Matthew Sailors, David A A. Schoenfeld, Michael Shapiro, Geoffrey Silver, Richard Smith, Gregory Stephanopoulos, Gary Stormo, Ronald G G. Tompkins, Mehmet Toner, Shaw Warren, Michael West, Steven Wolfe, Wenzhong Xiao, Vernon Young posted to polytrauma puces_adn transcriptome by textoris on 2005-06-28 05:22:59 as along with 4 people and 1 group snuppepuppan kentsis jfr mgaldzic CHIP
	Independence and reproducibility across microarray platforms [My Copy] Nature Methods, Vol. 2, No. 5. (21 April 2005), pp. 337-344. by Jennie E. Larkin, Bryan C. Frank, Haralambos Gavras, Razvan Sultana, John Quackenbush posted to analyse genomique puces_adn stat transcriptome by textoris on 2005-06-27 19:59:20 as along with 2 people balajis ghattem
	Standardizing global gene expression analysis between laboratories and across platforms. [My Copy] Nat Methods, Vol. 2, No. 5. (May 2005), pp. 351-356. by T. Bammler, R. P. Beyer, S. Bhattacharya, et al.G. A. Boorman, A. Boyles, B. U. Bradford, R. E. Bumgarner, P. R. Bushel, K. Chaturvedi, D. Choi, M. L. Cunningham, S. Deng, H. K. Dressman, R. D. Fannin, F. M. Farin, J. H. Freedman, R. C. Fry, A. Harper, M. C. Humble, P. Hurban, T. J. Kavanagh, W. K. Kaufmann, K. F. Kerr, L. Jing, J. A. Lapidus, M. R. Lasarev, J. Li, Y. J. Li, E. K. Lobenhofer, X. Lu, R. L. Malek, S. Milton, S. R. Nagalla, J. P. O'malley, V. S. Palmer, P. Pattee, R. S. Paules, C. M. Perou, K. Phillips, L. X. Qin, Y. Qiu, S. D. Quigley, M. Rodland, I. Rusyn, L. D. Samson, D. A. Schwartz, Y. Shi, J. L. Shin, S. O. Sieber, S. Slifer, M. C. Speer, P. S. Spencer, D. I. Sproles, J. A. Swenberg, W. A. Suk, R. C. Sullivan, R. Tian, R. W. Tennant, S. A. Todd, C. J. Tucker, B. Van Houten, B. K. Weis, S. Xuan, H. Zarbl, posted to analyse genomique puces_adn stat transcriptome by textoris on 2005-06-27 19:57:35 as
	Multiple-laboratory comparison of microarray platforms. [My Copy] Nature methods, Vol. 2, No. 5. (21 May 2005), pp. 345-350. by Rafael A. Irizarry, Daniel Warren, Forrest Spencer, et al.Irene F. Kim, Shyam Biswal, Bryan C. Frank, Edward Gabrielson, Joe G. Garcia, Joel Geoghegan, Gregory Germino, Constance Griffin, Sara C. Hilmer, Eric Hoffman, Anne E. Jedlicka, Ernest Kawasaki, Francisco Martínez-Murillo, Laura Morsberger, Hannah Lee, David Petersen, John Quackenbush, Alan Scott, Michael Wilson, Yanqin Yang, Shui Qing Q. Ye, Wayne Yu posted to analyse genomique puces_adn stat by textoris on 2005-06-27 19:56:45 as along with 7 people and 2 groups shikin daforerog floatingpoint balajis yoh nickluscombe mariakmejia GeneGo EBI-regulation
	Of fish and chips [My Copy] Nature Methods, Vol. 2, No. 5., pp. 329-330. by Gavin Sherlock posted to genomique puces_adn by textoris on 2005-06-27 19:56:02 as

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sepsis	96
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puces_adn	54
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