thamelry's library 22 articles Export

	Protein aggregation and amyloidosis: confusion of the kinds? [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Frederic Rousseau, Joost Schymkowitz, Luis Serrano posted to aggregation by thamelry on 2006-08-28 09:48:35 as along with 4 people and 1 group bobychan aalibes caporaso allmensch biomedical-nlp
	A model for statistical significance of local similarities in structure. [My Copy] J Mol Biol, Vol. 326, No. 5. (7 March 2003), pp. 1307-1316. by A. Stark, S. Sunyaev, R. B. Russell posted to sites by thamelry on 2006-03-02 15:29:30 as along with 8 people and 2 groups karbak ana nigham chad_davis nickolay robert scis0000001 siebertm structural_bioinformatics Bioinformatics
	Development of novel statistical potentials for protein fold recognition. [My Copy] Current opinion in structural biology. , Vol. 14, No. 2. (April 2004), pp. 225-232. by N. V. Buchete, J. E. Straub, D. Thirumalai posted to no-tag by thamelry on 2006-03-02 14:56:00 as along with 3 people flbarroso krapnik mirzazadeh
	Orientational potentials extracted from protein structures improve native fold recognition. [My Copy] Protein Sci, Vol. 13, No. 4. (April 2004), pp. 862-874. by N. V. Buchete, J. E. Straub, D. Thirumalai posted to energy neighbors by thamelry on 2006-03-02 14:55:29 as along with 2 people j3xucite kgutwin
	Protein structure prediction constrained by solution X-ray scattering data and structural homology identification. [My Copy] J Mol Biol, Vol. 316, No. 1. (8 February 2002), pp. 173-187. by W. Zheng, S. Doniach posted to saxs by thamelry on 2006-02-20 16:08:44 as along with 1 person dgront
	Persistence of Native-Like Topology in a Denatured Protein in 8 M Urea [My Copy] Science, Vol. 293, No. 5529. (20 July 2001), pp. 487-489. by David Shortle, Michael S. Ackerman posted to folding unfolded_state by thamelry on 2006-02-06 15:51:56 as along with 2 people dsmueller allmensch
	Prospects for ab initio protein structural genomics. [My Copy] J Mol Biol, Vol. 306, No. 5. (9 March 2001), pp. 1191-1199. by K. T. Simons, C. Strauss, D. Baker posted to 3d_prediction fragment_library genomic_3d_prediction protein rosetta by thamelry on 2006-01-11 09:21:56 as
	Dependency between consecutive local conformations helps assemble protein structures from secondary structures using Go potential and greedy algorithm [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 61, No. 4., pp. 732-740. by Pierre Tuffery, Philippe Derreumaux posted to fragmnet_library mcmc modelling by thamelry on 2005-12-07 13:47:41 as along with 1 person j3xucite
	A tetrapeptide-based method for polyproline II-type secondary structure prediction [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 61, No. 4., pp. 763-768. by Peter K. Vlasov, Anna V. Vlasova, Vladimir G. Tumanyan, Natalia G. Esipova posted to no-tag by thamelry on 2005-12-07 10:43:28 as
	Reassessing random-coil statistics in unfolded proteins [My Copy] PNAS, Vol. 101, No. 34. (24 August 2004), pp. 12497-12502. by Nicholas C. Fitzkee, George D. Rose posted to unfolded_state by thamelry on 2005-11-29 14:40:12 as along with 3 people apaydin allmensch rph
	Modeling structurally variable regions in homologous proteins with rosetta. [My Copy] Proteins, Vol. 55, No. 3. (15 May 2004), pp. 656-677. by C. A. Rohl, C. E. Strauss, D. Chivian, D. Baker posted to no-tag by thamelry on 2005-11-29 12:18:43 as along with 4 people and 1 group jwm vavi yongzhao hmk TSRI_MGL
	New efficient statistical sequence-dependent structure prediction of short to medium-sized protein loops based on an exhaustive loop classification. [My Copy] J Mol Biol, Vol. 289, No. 5. (25 June 1999), pp. 1469-1490. by J. Wojcik, J. P. Mornon, J. Chomilier posted to loop_modelling phi_psi by thamelry on 2005-11-29 12:13:58 as along with 1 person and 1 group Einat structural_bioinformatics
	A novel exhaustive search algorithm for predicting the conformation of polypeptide segments in proteins. [My Copy] Proteins, Vol. 40, No. 1. (1 July 2000), pp. 135-144. by C. M. Deane, T. L. Blundell posted to loop_modelling phi_psi by thamelry on 2005-11-29 12:12:48 as along with 3 people vavi medic0747 cdeane
	Modeling protein loops using a phi i + 1, psi i dimer database. [My Copy] Protein Sci, Vol. 4, No. 7. (July 1995), pp. 1412-1420. by S. Sudarsanam, R. F. DuBose, C. J. March, S. Srinivasan posted to loop_modelling phi_psi by thamelry on 2005-11-29 12:09:14 as
	Multiple Alignment Using Hidden Markov Models [My Copy] In third international conference on intelligent systems for molecular biology, pp. 114-120. by Sr Eddy edited by C. Rawlings, D. Clark, R. Altman, L. Hunter, T. Lengauer, S. Wodak posted to hmm sampling stochastic viterbi by thamelry on 2005-11-22 11:01:12 as
	Bayesian adaptive sequence alignment algorithms. [My Copy] Bioinformatics, Vol. 14, No. 1. (1998), pp. 25-39. by J. Zhu, J. S. Liu, C. E. Lawrence posted to hmm sampling by thamelry on 2005-11-22 10:24:16 as
	HMM sampling and applications to gene finding and alternative splicing. [My Copy] Bioinformatics, Vol. 19 Suppl 2 (October 2003) by S. L. Cawley, L. Pachter posted to hmm sampling by thamelry on 2005-11-21 08:50:27 as along with 1 person and 1 group kaspermunch Bioinformatics
	P-SEA: a new efficient assignment of secondary structure from C alpha trace of proteins [My Copy] Comput. Appl. Biosci., Vol. 13, No. 3. (1 June 1997), pp. 291-295. by G. Labesse, N. Colloc'h, J. Pothier, Jp Mornon posted to no-tag by thamelry on 2005-11-17 12:13:06 as along with 2 people wouterboomsma j3xucite
	Transition states for protein folding have native topologies despite high structural variability. [My Copy] Nat Struct Mol Biol, Vol. 11, No. 5. (May 2004), pp. 443-449. by K. Lindorff-Larsen, M. Vendruscolo, E. Paci, C. M. Dobson posted to folding nmr prediction protein by thamelry on 2005-11-16 15:15:52 as along with 1 person allmensch
	Toward High-Resolution de Novo Structure Prediction for Small Proteins [My Copy] Science, Vol. 309, No. 5742. (16 September 2005), pp. 1868-1871. by Philip Bradley, Kira M. S. Misura, David Baker posted to modelling protein by thamelry on 2005-11-14 13:53:23 as along with 11 people and 4 groups ucbcjbm paddydu kgutwin BragilMassoud ana barry thaliana jwm vavi marcius gbart structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	Automatic modeling of protein backbones in electron-density maps via prediction of Calpha coordinates. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 58, No. Pt 12. (December 2002), pp. 2043-2054. by T. R. Ioerger, J. C. Sacchettini posted to c-alpha theta-tau by thamelry on 2005-11-14 13:28:33 as
	Validation of protein models from Calpha coordinates alone. [My Copy] J Mol Biol, Vol. 273, No. 2. (24 October 1997), pp. 371-376. by G. J. Kleywegt posted to c-alpha theta-tau by thamelry on 2005-11-14 13:21:59 as

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hmm	3
sampling	3
protein	3
loop_modelling	3
phi_psi	3
c-alpha	2
unfolded_state	2
modelling	2
theta-tau	2
folding	2
viterbi	1
mcmc	1
sites	1
nmr	1
rosetta	1
saxs	1
neighbors	1
genomic_3d_prediction	1
fragmnet_library	1
fragment_library	1
aggregation	1
stochastic	1
prediction	1
3d_prediction	1
energy	1

thamelry's library 22 articles Export

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