tomhebbron's nk [52 articles] Export

Recent papers added to tomhebbron's library classified by the tag nk. You can also see everyone's nk.

	A natural class of robust networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 15. (22 July 2003), pp. 8710-8714. by Maximino Aldana, Philippe Cluzel posted to topology scale-free robustness nk network evolution dynamics analysis by tomhebbron on 2009-09-07 12:57:48 as along with 6 people and 5 groups dlobo kinop jmenche eldan jwdietrich timflutre GEB MathBio Cybernetics Biomedical_Cybernetics AQUA-FONTIS-Study
	Growing directed networks: organization and dynamics [My Copy] New Journal of Physics, Vol. 9, No. 8. (August 2007), pp. 282-282. by Baosheng Yuan, Bing-Hong Wang posted to scale-free power-law nk network dynamics by tomhebbron on 2009-09-07 12:56:27 as
	Reliability of regulatory networks and its evolution [My Copy] Journal of Theoretical Biology, Vol. 258, No. 4. (21 June 2009), pp. 502-512. by Stefan Braunewell, Stefan Bornholdt posted to evolution model network nk reliability by tomhebbron on 2009-07-16 14:59:19 as along with 1 person VGreiff
	Genetic Programming for Kernel-based Learning with Co-evolving Subsets Selection, in "Parallel Problem Solving from Nature, Reykjavik [My Copy] In LNCS, n o 4193, Vol. 2006 (2006), pp. 1008-1017. by Christian Gagné, Marc Schoenauer, Michèle Sebag, Marco Tomassini posted to nk coevolution evolution gp svm by tomhebbron on 2009-06-11 00:21:46 as
	Metabolic stability and epigenesis in randomly constructed genetic nets [My Copy] Journal of Theoretical Biology, Vol. 22, No. 3. (March 1969), pp. 437-467. by S. Kauffman posted to metabolism network nk by tomhebbron on 2009-02-15 16:25:17 as along with 7 people antonkratz Dangerfc kinop verdicchio eldan wnpx gcalda
	Where are Bottlenecks in NK Fitness Landscapes? [My Copy] (4 Jul 2007) by Sebastien Verel, Philippe Collard, Manuel Clergue posted to msc-thesis nk fitness-landscape by tomhebbron on 2008-09-12 17:34:37 as along with 1 person sato-ryu
	A Biologist's View of Software Evolution [My Copy] In RAM-SE (2005), pp. 95-105. by Delesley Hutchins edited by Walter Cazzola, Shigeru Chiba, Gunter Saake, Tom Tourwé posted to software nk genetic-algorithm by tomhebbron on 2008-09-12 17:21:06 as
	Adaptive Walks in a Gene Network Model of Morphogenesis: insights into the Cambrian explosion [My Copy] International Journal of Developmental Biology, Vol. 2003 (2003), pp. 685-693. by Ricard V. Solé, Pau Fernández, Stuart A. Kauffman posted to cambrian nk by tomhebbron on 2008-09-12 17:17:07 as
	Evolutionary Algorithms, Fitness Landscapes and Search [My Copy] (1995) by Terry Jones posted to nk fitness-landscape by tomhebbron on 2008-09-02 01:11:16 as
	Theory of spin glasses [My Copy] Journal of Physics F: Metal Physics, Vol. 5, No. 5. (1975), pp. 965-974. by S. F. Edwards, P. W. Anderson posted to spin-glass nk by tomhebbron on 2008-09-02 00:36:31 as along with 3 people jmenche RMT gi0rgi0ne
	Modeling epistatic interactions in fitness landscapes [My Copy] Evolutionary Computation, 2000. Proceedings of the 2000 Congress on In Evolutionary Computation, 2000. Proceedings of the 2000 Congress on, Vol. 2 (2000), pp. 932-937 vol.2. by X. Hu, G. Greenwood, S. Ravichandran posted to nk fitness-landscape by tomhebbron on 2008-09-02 00:17:43 as
	Effects of Selective Neutrality on the Evolution of Molecular Species [My Copy] Proceedings: Biological Sciences, Vol. 265, No. 1403. (1998), pp. 1333-1338. by M. E. J. Newman, Robin Engelhardt posted to fitness-landscapes neutrality nk fitness-landscape by tomhebbron on 2008-09-01 23:48:32 as along with 1 person mrm
	Why some fitness landscapes are fractal. [My Copy] Journal of theoretical biology, Vol. 163, No. 2. (21 July 1993), pp. 255-275. by E. D. Weinberger, P. F. Stadler posted to fitness-landscapes nk fitness-landscape by tomhebbron on 2008-09-01 23:43:54 as
	Towards a general theory of adaptive walks on rugged landscapes [My Copy] Journal of Theoretical Biology, Vol. 128, No. 1. (7 September 1987), pp. 11-45. by S. Kauffman, S. Levin posted to nk complexity by tomhebbron on 2008-08-20 23:08:12 as along with 1 person and 1 group livingthingdan livingthing
	Epistasis and Shapes of Fitness Landscapes [My Copy] (14 Apr 2006) by Niko Beerenwinkel, Lior Pachter, Bernd Sturmfels posted to landscape nk fitness-landscape by tomhebbron on 2008-08-20 20:46:09 as
	The Emergence of Overlapping Scale-free Genetic Architecture in Digital Organisms [My Copy] Artificial Life, Vol. 14, No. 3. (2008), pp. 265-275. by P. Gerlee, T. Lundh posted to nk complexity by tomhebbron on 2008-08-20 01:44:37 as
	Reciprocity and Its Limits: Considerations for a Study of the Pre-Hispanic Pueblo World [My Copy] No. 99-05-033. (May 1999) by Timothy A. Kohler, Matthew Van Pelt, Lorene Yap posted to nk by tomhebbron on 2008-08-19 23:54:49 as
	New global optima results for the Kauffman <i>NK</i> model: handling dependency [My Copy] Math. Program., Vol. 108, No. 2. (September 2006), pp. 475-494. by Hemanshu Kaul, Sheldon H. Jacobson posted to nk by tomhebbron on 2008-08-19 23:45:08 as
	A fitness landscape approach to decentralised problemsolving [My Copy] (2004) by K. Frenken, M. Valente posted to nk fitness-landscape by tomhebbron on 2008-08-19 23:41:12 as
	Firm Structure, Search and Environmental Complexity [My Copy] (2005) by J. Barr, N. Hanaki posted to nk complexity by tomhebbron on 2008-08-19 23:37:42 as
	Evolving better representations through selective genome growth [My Copy] In In Proceedings of the IEEE World Congress on Computational Intelligence (1994), pp. 182-187. by Lee Altenberg posted to nk msc-thesis fitness-landscape by tomhebbron on 2008-08-18 02:53:23 as
	An exploration of NK landscapes with neutrality. [My Copy] (October 2001) by N. Geard posted to nk neutrality fitness-landscape by tomhebbron on 2008-08-18 00:06:30 as
	A Network Model for the Correlation between Epistasis and Genomic Complexity [My Copy] PLoS ONE, Vol. 3, No. 7. (16 July 2008), e2663. by Rafael Sanjuán, Miguel R. Nebot posted to network nk complexity by tomhebbron on 2008-08-01 00:26:41 as along with 2 people renewang mjoach
	Coevolution in a rugged fitness landscape [My Copy] Physical Review A, Vol. 46, No. 10. (15 November 1992), 6724. by Per Bak, Henrik Flyvbjerg, Benny Lautrup posted to evolution fitness-landscape msc-thesis nk nkc by tomhebbron on 2008-07-07 17:53:19 as
	A hierarchical approach to protein molecular evolution. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 6. (16 March 1999), pp. 2591-2595. by L. D. Bogarad, M. W. Deem posted to chemistry evolution immune nk complexity by tomhebbron on 2008-06-26 09:58:09 as along with 2 people dfgreen Sylvain_Prigent
	NKalpha: Non-uniform epistatic interactions in an extended NK model [My Copy] In Artificial Life XI: Proceedings of the Eleventh International Conference on the Simulation and Synthesis of Living Systems (2008), pp. 234-241. by Tom Hebbron, Seth Bullock, Dave Cliff posted to nk topology by tomhebbron on 2008-06-16 19:23:09 as
	The Dynamic Changes in Roles of Learning through the Baldwin Effect [My Copy] Artificial Life, Vol. 13, No. 1. (January 2007), pp. 31-43. by Reiji Suzuki, Takaya Arita posted to baldwin phenotype-plasticity nk fitness-landscape by tomhebbron on 2008-06-15 18:11:24 as
	On the Baldwin effect. [My Copy] Artificial life, Vol. 5, No. 3. (1999), pp. 241-246. by L. Bull posted to baldwin nk fitness-landscape by tomhebbron on 2008-06-15 15:37:04 as
	Evolving Cultural Learning Parameters in an NK Fitness Landscape [My Copy] Advances in Artificial Life In Advances in Artificial Life (2007), pp. 304-314. by Dara Curran, Colm O’riordan, Humphrey Sorensen posted to baldwin phenotype-plasticity nk fitness-landscape by tomhebbron on 2008-06-15 15:33:47 as
	Repeated Occurrences of the Baldwin Effect Can Guide Evolution on Rugged Fitness Landscapes [My Copy] Artificial Life, 2007. ALIFE '07. IEEE Symposium on In Artificial Life, 2007. ALIFE '07. IEEE Symposium on (2007), pp. 8-14. by R. Suzuki, T. Arita posted to baldwin phenotype-plasticity nk fitness-landscape by tomhebbron on 2008-06-15 15:32:49 as
	Evolution and Niche Construction in NKES Fitness Landscape [My Copy] (2005) by R. Suzuki, T. Arita posted to evolution nk fitness-landscape by tomhebbron on 2008-06-01 23:26:05 as
	Growing network with local rules: Preferential attachment, clustering hierarchy, and degree correlations [My Copy] Physical Review E, Vol. 67, No. 5. (7 May 2003), 056104. by Alexei Vázquez posted to nk assortativity by tomhebbron on 2008-05-12 14:42:45 as along with 5 people Kovanen muraken chibatching AbnerCYH marcio
	Inferring Network Mechanisms: The Drosophila melanogaster Protein Interaction Network [My Copy] (15 August 2004) by Manuel Middendorf, Etay Ziv, Chris Wiggins posted to nk topology assortativity by tomhebbron on 2008-05-12 14:40:10 as along with 2 people and 1 group camster iris_2001 dbk-lab
	Random graphs with arbitrary degree distributions and their applications [My Copy] Physical Review E, Vol. 64, No. 2. (24 July 2001), 026118. by M. E. J. Newman, S. H. Strogatz, D. J. Watts posted to random-graph nk by tomhebbron on 2008-05-09 15:53:57 as along with 5 people andreassorge vmarceau agutfraind muraken nolodie
	At Home in the Universe: The Search for Laws of Self-organization and Complexity [My Copy] (1995) by S. A. Kauffman posted to nk biomol-project msc-thesis complexity by tomhebbron on 2008-05-05 00:56:39 as
	The NK model of rugged fitness landscapes and its application to maturation of the immune response* [My Copy] Journal of Theoretical Biology, Vol. 141, No. 2. (21 November 1989), pp. 211-245. by S. Kauffman, E. Weinberger posted to nk immune fitness-landscape by tomhebbron on 2008-05-05 00:16:45 as along with 1 person VGreiff
	Adaptive walks with noisy fitness measurements [My Copy] Molecular Diversity, Vol. 1, No. 1. (1995), pp. 53-68. by Bennett Levitan, Stuart Kauffman posted to nk evolution fitness-landscape by tomhebbron on 2008-04-15 15:45:59 as along with 1 person statistic01
	Evolution of Firms in Complex Worlds: Generalized NK Model [My Copy] Connectionist Models of Neurons, Learning Processes, and Artificial Intelligence (2001), pp. 602-611. by Nadia Jacoby posted to nk complexity by tomhebbron on 2008-04-15 15:45:35 as
	Molecular basis for evolving modularity in the yeast protein interaction network. [My Copy] PLoS computational biology, Vol. 3, No. 11. (1 November 2007), e226. by Ariel Fernández posted to yeast topology nk assortativity by tomhebbron on 2008-03-12 00:15:36 as along with 6 people saket pradiptaray zwang niallhaslam Ema phoenixzxl
	A methane fuse for the Cambrian explosion: carbon cycles and true polar wander [My Copy] Comptes Rendus Geosciences, Vol. 335, No. 1. (January 2003), pp. 65-78. by Joseph L. Kirschvink, Timothy D. Raub posted to cambrian nk by tomhebbron on 2008-03-02 20:31:54 as
	A theoretical integration of Cambrian explosion and post-Permian quiescence [My Copy] Biosystems, Vol. 43, No. 1. (May 1997), pp. 63-68. by Yoshinori Takahara, Nobuaki Ono posted to nk by tomhebbron on 2008-03-02 20:29:41 as
	Explaining the cambrian 'explosion' of animals [My Copy] Annual Review of Earth and Planetary Sciences, Vol. 34 (2006), pp. 355-384. by Charles R. Marshall posted to nk by tomhebbron on 2008-03-02 20:29:02 as
	ConnectComplete Origins of Order in Dynamical Models. A review of Stuart A. Kauff... [My Copy] posted to nk by tomhebbron on 2008-03-02 20:27:52 as
	Complexity, organization, and Stuart Kauffman's The Origins of Order [My Copy] Journal of Economic Behavior & Organization, Vol. 29, No. 1. (January 1996), pp. 1-25. by Frank H. Westhoff, Beth V. Yarbrough, Robert M. Yarbrough posted to nk complexity by tomhebbron on 2008-03-02 20:24:14 as
	Maximally rugged NK landscapes contain the highest peaks [My Copy] Proceedings of the 2005 conference on Genetic and evolutionary computation (2005), pp. 579-584. by B. Skellett, B. Cairns, N. Geard, B. Tonkes, J. Wiles posted to msc-thesis nk by tomhebbron on 2007-10-10 23:34:51 as
	Organizational Sticking Points on NK Landscapes [My Copy] Complexity, Vol. 7, No. 5. (2002), pp. 31-43. by J. W. Rivkin, N. Siggelkow posted to msc-thesis nk complexity by tomhebbron on 2007-10-10 23:34:51 as
	A comparison of neutral landscapes - NK, NKp and NKq [My Copy] Evolutionary Computation, 2002. CEC'02. Proceedings of the 2002 Congress on, Vol. 1 (2002) by N. Geard, J. Wiles, J. Hallinan, B. Tonkes, B. Skellett posted to msc-thesis nk by tomhebbron on 2007-10-10 23:34:51 as
	An Analysis of Phase Transition in NK Landscapes [My Copy] Journal of Artificial Intelligence Research, Vol. 17 (2002), pp. 309-332. by Y. Gao, J. C. Culberson posted to msc-thesis nk by tomhebbron on 2007-10-10 23:34:51 as
	Threshold Phenomena in NK Landscapes [My Copy] (2001) by Y. Gao posted to msc-thesis nk by tomhebbron on 2007-10-10 23:34:51 as
	Estimating Some Features of NK Fitness Landscapes [My Copy] The Annals of Applied Probability, Vol. 12, No. 4. (2002), pp. 1299-1321. by S. N. Evans, D. Steinsaltz posted to msc-thesis nk fitness-landscape by tomhebbron on 2007-10-10 23:34:51 as along with 1 person statistic01

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immune	340
evolution	247
msc-thesis	141
complexity	68
network	67
artificial-immune-systems	61
model	58
fitness-landscape	54
nk	52
adaptive_immune_system	42
topology	42
modelling	34
biomol-project	32
ecology	32
review	31
mit-evolution-of-the-immune-system	30
danger-theory	27
history	27
theory	24
coevolution	23
pathogen	23
genome	22
assortativity	20
metabolism	18
proteome	18
self	18
sense-reading-group	18
csi-report	16
innate	16
predation	16
cell	15
major-transitions	15
mhc	15
somatic-hypermutation	15
bacteria	14
alife	13
microbial	13
origins	13
virus	13
economics	12
innate-immune	12
developmental-genome	11
genetic-algorithm	11
motif	11
origin	11
science	11
emergence	10
immunology	10
philosophy	10
protein	10
strategy	10
tlr	10
parasitism	9
horizontal-gene-transfer	8
individuality	8
lock-in	8
systems-biology	8
tcell	8
tolerance	8
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autopoiesis	7
baldwin	7
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ig	5
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gp	4
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interactome	4
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membrane	4
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immunity	2
life	2
metabolic	2
microbial_communities	2
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mine	2
mitochondia	2
moonlighting	2
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optimal_defense	2
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pamp	2
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avida	1
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cache	1
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file-import-08-08-18	1
file-import-09-08-20	1
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hyppo	1
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immunoglobulin	1
immunoprivilege	1
imune	1
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innate_immune_system	1
insects	1
integrity	1
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mutations	1
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omes	1
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vertebrate	1
vision	1
walled-city	1
warfare	1
web	1
webscience	1
weismann-barrier	1
writing	1

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