tonamswish's network [33 articles] Export

Recent papers added to tonamswish's library classified by the tag network. You can also see everyone's network.

	How to infer gene networks from expression profiles. [My Copy] Molecular systems biology, Vol. 3 (13 February 2007) by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo posted to review network bioinfo by tonamswish on 2009-11-18 15:32:48 as along with 38 people and 3 groups Jporci beete zufar nicholasflann icq242500260 guhjy Zephyrus antonkratz phoenixzxl bertelsen isimpson daforerog poirel agonzale roys Neeperando APRegier rdiaz klo Borelli ggallone ptrobajo druvus cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali Jarman Lab EBI-regulation Plantandetc
	Motif-directed network component analysis for regulatory network inference [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 1. (2008), S21. by Chen Wang, Jianhua Xuan, Li Chen, et al.Po Zhao, Yue Wang, Robert Clarke, Eric Hoffman posted to tf regulatory_network network bioinfo by tonamswish on 2009-11-04 20:12:32 as along with 3 people topsoil roys guhjy
	Global and Local Architecture of the Mammalian microRNA–Transcription Factor Regulatory Network [My Copy] PLoS Comput Biol, Vol. 3, No. 7. (13 July 2007), e131. by Reut Shalgi, Daniel Lieber, Moshe Oren, Yitzhak Pilpel posted to network microrna-tf microrna-mrna microrna bioinfo by tonamswish on 2009-10-30 15:09:54 as along with 17 people and 2 groups danaiancu myzhang daforerog mtagaya jfr andersbj rdiaz sebastien_vigneau ealloza zwang bootsy cabbagezs rahulthadani heliopais ale maralena kevinemamy Bioinformatics microRNA
	A map of human cancer signaling [My Copy] Molecular Systems Biology, Vol. 3 (18 December 2007) by Qinghua Cui, Yun Ma, Maria Jaramillo, et al.Hamza Bari, Arif Awan, Song Yang, Simo Zhang, Lixue Liu, Meng Lu, Maureen O'Connor-McCourt, Enrico O. Purisima, Edwin Wang posted to systems_biology network bioinfo by tonamswish on 2009-10-23 05:20:12 as along with 12 people and 1 group poojamaj Zephyrus agomez shikin jfr tmmurali ealloza cjeans Ema renatomilani srp33 frohike Roswell Cancer Crosstalk
	Network biology: understanding the cell's functional organization [My Copy] Nature Reviews Genetics, Vol. 5, No. 2. (01 February 2004), pp. 101-113. by Albert-Laszlo Barabasi, Zoltan N. Oltvai posted to systems_biology review network by tonamswish on 2009-10-20 02:32:10 as along with 26 people and 1 group ess30 poirel asadrahman tmarscha cn_honjyo behindtherabbit yangjustinc lawraga sschurer hadesnumb cswinburne babakap carlk pkm daforerog diamantis okarsligil bayesian tny mmt grahamc mirzazadeh lpfernandes karfunkel vietanh0 nolodie Bioinformatics
	The basic region/helix-loop-helix/leucine zipper domain of Myc proto-oncoproteins: function and regulation. [My Copy] Oncogene, Vol. 18, No. 19. (13 May 1999), pp. 2955-2966. by B. Lüscher, L. G. Larsson posted to review network myc max mad4 mad3 mad cancer by tonamswish on 2009-10-02 14:45:45 as along with 1 person sennoma
	Network modeling links breast cancer susceptibility and centrosome dysfunction [My Copy] Nature Genetics, Vol. 39, No. 11. (07 October 2007), pp. 1338-1349. by Miguel A. Pujana, Jing-Dong J. Han, Lea M. Starita, et al.Kristen N. Stevens, Muneesh Tewari, Jin S. Ahn, Gad Rennert, Victor Moreno, Tomas Kirchhoff, Bert Gold, Volker Assmann, Wael M. ElShamy, Jean-Francois Rual, Douglas Levine, Laura S. Rozek, Rebecca S. Gelman, Kristin C. Gunsalus, Roger A. Greenberg, Bijan Sobhian, Nicolas Bertin, Kavitha Venkatesan, Nono Ayivi-Guedehoussou, Xavier Sole, Pilar Hernandez, Conxi Lazaro, Katherine L. Nathanson, Barbara L. Weber, Michael E. Cusick, David E. Hill, Kenneth Offit, David M. Livingston, Stephen B. Gruber, Jeffrey D. Parvin, Marc Vidal posted to protein_interaction network cytoscape by tonamswish on 2009-09-18 01:38:40 as along with 11 people and 1 group ajbattle jaimie koller jmuhlich jfr ealloza cjeans nedwards jdiezperezj phoenixzxl chrisamiller BioinfoCIPF
	Defining Network Topologies that Can Achieve Biochemical Adaptation [My Copy] Cell, Vol. 138, No. 4. (21 August 2009), pp. 760-773. by Wenzhe Ma, Ala Trusina, Hana El-Samad, Wendell A. Lim, Chao Tang posted to review network cell by tonamswish on 2009-09-15 19:14:31 as along with 1 person cjryan
	The interplay between transcription factors and microRNAs in genome-scale regulatory networks [My Copy] BioEssays, Vol. 31, No. 4. (April 2009), pp. 435-445. by Natalia J. Martinez, Albertha J. M. Walhout posted to tf review ppi network microrna by tonamswish on 2009-09-14 22:45:21 as along with 4 people and 1 group heliopais inesdesantiago guhjy ealloza microRNA
	Validating module network learning algorithms using simulated data [My Copy] (4 May 2007) by Tom Michoel, Steven Maere, Eric Bonnet, et al.Anagha Joshi, Yvan Saeys, Tim Van den Bulcke, Koenraad Van Leemput, Piet van Remortel, Martin Kuiper, Kathleen Marchal, Yves Van de Peer posted to bioinfo network network_simulator tool by tonamswish on 2009-07-29 06:22:17 as
	Abstract analysis of pathways using the BN++ software framework [My Copy] BMC Systems Biology, Vol. 1, No. Suppl 1. (2007), P24. by Jan Kuntzer, Benny Kneissl, Oliver Kohlbacher, Hans P. Lenhof posted to bioinfo bn_plusplus network pathway tool by tonamswish on 2009-06-16 14:03:03 as
	BNDB - The Biochemical Network Database [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Jan Kuentzer, Christina Backes, Torsten Blum, et al.Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Hans P. Lenhof posted to bioinfo bndb database network pathway tool by tonamswish on 2009-06-16 14:01:54 as along with 5 people and 1 group guhjy moborg niallhaslam julesyoo mircea NCCT Lab Reading Group
	On the impact of entropy estimation on transcriptional regulatory network inference based on mutual information. [My Copy] EURASIP journal on bioinformatics & systems biology (2009) by C. Olsen, P. E. Meyer, G. Bontempi posted to bioinfo network network_simulator review synthetic tool by tonamswish on 2009-06-11 23:14:57 as along with 1 person ipark-kaist
	The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line. [My Copy] Nature genetics, Vol. 41, No. 5. (19 May 2009), pp. 553-562. by FANTOM Consortium, Harukazu Suzuki, Alistair R. Forrest, et al.Erik van Nimwegen, Carsten O. Daub, Piotr J. Balwierz, Katharine M. Irvine, Timo Lassmann, Timothy Ravasi, Yuki Hasegawa, Michiel J. de Hoon, Shintaro Katayama, Kate Schroder, Piero Carninci, Yasuhiro Tomaru, Mutsumi Kanamori-Katayama, Atsutaka Kubosaki, Altuna Akalin, Yoshinari Ando, Erik Arner, Maki Asada, Hiroshi Asahara, Timothy Bailey, Vladimir B. Bajic, Denis Bauer, Anthony G. Beckhouse, Nicolas Bertin, Johan Björkegren, Frank Brombacher, Erika Bulger, Alistair M. Chalk, Joe Chiba, Nicole Cloonan, Adam Dawe, Josee Dostie, Pär G. Engström, Magbubah Essack, Geoffrey J. Faulkner, J. Lynn Fink, David Fredman, Ko Fujimori, Masaaki Furuno, Takashi Gojobori, Julian Gough, Sean M. Grimmond, Mika Gustafsson, Megumi Hashimoto, Takehiro Hashimoto, Mariko Hatakeyama, Susanne Heinzel, Winston Hide, Oliver Hofmann, Michael Hörnquist, Lukasz Huminiecki, Kazuho Ikeo, Naoko Imamoto, Satoshi Inoue, Yusuke Inoue, Ryoko Ishihara, Takao Iwayanagi, Anders Jacobsen, Mandeep Kaur, Hideya Kawaji, Markus C. Kerr, Ryuichiro Kimura, Syuhei Kimura, Yasumasa Kimura, Hiroaki Kitano, Hisashi Koga, Toshio Kojima, Shinji Kondo, Takeshi Konno, Anders Krogh, Adele Kruger, Ajit Kumar, Boris Lenhard, Andreas Lennartsson, Morten Lindow, Marina Lizio, Cameron Macpherson, Norihiro Maeda, Christopher A. Maher, Monique Maqungo, Jessica Mar, Nicholas A. Matigian, Hideo Matsuda, John S. Mattick, Stuart Meier, Sei Miyamoto, Etsuko Miyamoto-Sato, Kazuhiko Nakabayashi, Yutaka Nakachi, Mika Nakano, Sanne Nygaard, Toshitsugu Okayama, Yasushi Okazaki, Haruka Okuda-Yabukami, Valerio Orlando, Jun Otomo, Mikhail Pachkov, Nikolai Petrovsky, Charles Plessy, John Quackenbush, Aleksandar Radovanovic, Michael Rehli, Rintaro Saito, Albin Sandelin, Sebastian Schmeier, Christian Schönbach, Ariel S. Schwartz, Colin A. Semple, Miho Sera, Jessica Severin, Katsuhiko Shirahige, Cas Simons, George St Laurent, Masanori Suzuki, Takahiro Suzuki, Matthew J. Sweet, Ryan J. Taft, Shizu Takeda, Yoichi Takenaka, Kai Tan, Martin S. Taylor, Rohan D. Teasdale, Jesper Tegnér, Sarah Teichmann, Eivind Valen, Claes Wahlestedt, Kazunori Waki, Andrew Waterhouse, Christine A. Wells, Ole Winther, Linda Wu, Kazumi Yamaguchi, Hiroshi Yanagawa, Jun Yasuda, Mihaela Zavolan, David A. Hume, Riken Omics Science Center, Takahiro Arakawa, Shiro Fukuda, Kengo Imamura, Chikatoshi Kai, Ai Kaiho, Tsugumi Kawashima, Chika Kawazu, Yayoi Kitazume, Miki Kojima, Hisashi Miura, Kayoko Murakami, Mitsuyoshi Murata, Noriko Ninomiya, Hiromi Nishiyori, Shohei Noma, Chihiro Ogawa, Takuma Sano, Christophe Simon, Michihira Tagami, Yukari Takahashi, Jun Kawai, Yoshihide Hayashizaki posted to cell_growth differentiation network tf by tonamswish on 2009-06-10 13:55:22 as along with 15 people schwartzjmc rdiaz rsaito guhjy hagechouchin443 gdb burak YukaH coela mtagaya bertelsen xingxu TRHvidsten renatomilani antonkratz
	COPASI--a COmplex PAthway SImulator. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 24. (15 December 2006), pp. 3067-3074. by Stefan Hoops, Sven Sahle, Ralph Gauges, et al.Christine Lee, Jürgen Pahle, Natalia Simus, Mudita Singhal, Liang Xu, Pedro Mendes, Ursula Kummer posted to bioinfo copasi network network_simulator tool by tonamswish on 2009-06-03 15:28:47 as along with 10 people and 3 groups jvb yujiangwang schwartzjmc peterli agomez guhjy dragonrez carmaus dagmar pmendes dIEMoSIRIS MoSi-Rostock compneur
	Synthetic Microarray Data Generation with RANGE and NEMO. [My Copy] Bioinformatics (3 November 2007) by James Long, Mitchell Roth posted to bioinfo grn network network_simulator simulator tool by tonamswish on 2009-06-03 15:27:46 as along with 3 people guhjy shigepong roys
	Cytoscape: a software environment for integrated models of biomolecular interaction networks. [My Copy] Genome research, Vol. 13, No. 11. (November 2003), pp. 2498-2504. by Paul Shannon, Andrew Markiel, Owen Ozier, et al.Nitin S. Baliga, Jonathan T. Wang, Daniel Ramage, Nada Amin, Benno Schwikowski, Trey Ideker posted to cytoscape network network_visualization by tonamswish on 2009-05-28 15:15:18 as along with 34 people and 3 groups JeremyZucker daveGerrard fastjoe23 badi stharward kentz janani137 shung schwartzjmc APRegier panghouse robert85 capitall higueruelo shikin daforerog cswinburne thomaskelder nolodie giovenko Stew dragonrez balajis tvdbulck frohike carmaus dagmar natstreet jlh64 Evangelia pmendes yggdrasil carlk Borelli dIEMoSIRIS MoSi-Rostock compneur
	A Gene Network Simulator to Assess Reverse Engineering Algorithms [My Copy] Ann. N.Y. Acad. Sci In The Challenges of Systems Biology, Vol. 1158 (2009), pp. 125-142. by Barbara D. Camillo, Gianna Toffolo, Cobelli Claudio posted to bioinfo mrnaarray network network_simulator tool by tonamswish on 2009-05-27 14:54:11 as
	ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. [My Copy] BMC Bioinformatics, Vol. 7 Suppl 1 (2006) by A. A. Margolin, I. Nemenman, K. Basso, et al.C. Wiggins, G. Stolovitzky, R. Dalla Favera, A. Califano posted to bioinfo mrnaarray network tool by tonamswish on 2009-05-27 14:45:18 as along with 18 people frohike dolchan Neeperando akraemer APRegier verdicchio behindtherabbit kaarsinogen mbehbah1 druvus giovenko ptrobajo kentsis tmmurali jfr shigepong natstreet heliopais
	GeNGe: systematic generation of gene regulatory networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 9. (1 May 2009), pp. 1205-1207. by Hendrik Hache, Christoph Wierling, Hans Lehrach, Ralf Herwig posted to bioinfo network tool by tonamswish on 2009-05-27 14:25:45 as along with 7 people ekotelnikova ptrobajo sotacam reyez TRHvidsten rdiaz guhjy
	Network analysis of human glaucomatous optic nerve head astrocytes. [My Copy] BMC medical genomics, Vol. 2, No. 1. (2009), 24. by Tatiana Nikolskaya, Yuri Nikolsky, Tatiana Serebryiskaya, et al.Svetlana Zvereva, Eugene Sviridov, Zoltan Dezso, Eugene Rahkmatulin, Richard J. Brennan, Nick Yankovsky, Sanjoy K. Bhattacharya, Olga Agapova, M. Rosario Hernandez, Valery I. Shestopalov posted to bioinfo network tool by tonamswish on 2009-05-26 15:28:33 as along with 1 person and 1 group shikin GeneGo
	SynTReN : a generator of synthetic gene expression data for design and analysis of strucutre learning algorithms. http://homes.esat.kuleuven.be/~kmarchal/SynTReN/index.html [My Copy] (2006) posted to bioinfo network simulation_data tool by tonamswish on 2009-05-22 17:37:14 as
	Simulation studies for the identification of genetic networks from cDNA array and regulatory activity data. [My Copy] Proc. 2nd Intl. Conf. Systems Biology (2001), pp. 231-238. by D. E. Zak, F. J. Doyle, G. E. Gonye, J. S. Schwaber posted to bioinfo network simulation_data tool by tonamswish on 2009-05-22 16:20:59 as along with 1 person lukaswindhager
	Influence of network topology and data collection on network inference. [My Copy] Pac Symp Biocomput (2003), pp. 164-175. by V. A. Smith, E. D. Jarvis, A. J. Hartemink posted to bayesian bioinfo network simulation_data tool by tonamswish on 2009-05-22 16:17:47 as along with 1 person wnpx
	Artificial gene networks for objective comparison of analysis algorithms [My Copy] Bioinformatics, Vol. 19, No. suppl_2. (27 September 2003), pp. ii122-129. by Pedro Mendes, Wei Sha, Keying Ye posted to bioinfo mrnaarray network simulation_data tool by tonamswish on 2009-05-22 16:13:38 as along with 9 people and 2 groups meanerelk fastjoe23 poirel kaarsinogen camster tmmurali dragonrez lfriedl pmendes dbk-lab kdl
	A Gene Network Simulator to Assess Reverse Engineering Algorithms [My Copy] Annals of the New York Academy of Sciences, Vol. 1158, No. The Challenges of Systems Biology Community Efforts to Harness Biological Complexity. (2009), pp. 125-142. by Barbara Di Camillo, Gianna Toffolo, Claudio Cobelli posted to bioinfo network simulation_data tool by tonamswish on 2009-05-21 22:25:03 as along with 1 person meanerelk
	Benchmarking regulatory network reconstruction with GRENDEL [My Copy] Bioinformatics, Vol. 25, No. 6. (15 March 2009), pp. 801-807. by Brian C. Haynes, Michael R. Brent posted to bioinfo network simulation_data tool by tonamswish on 2009-05-21 22:15:45 as along with 7 people dolchan tmarscha TRHvidsten APRegier roys rdiaz imina
	Eigengene networks for studying the relationships between co-expression modules. [My Copy] BMC systems biology, Vol. 1, No. 1. (2007) by Peter Langfelder, Steve Horvath posted to bioinfo network network_simulator simulation_data tool by tonamswish on 2009-05-21 21:48:07 as along with 7 people jeremymiller aviad_work ptrobajo druvus isimpson jfr AlexanderPico
	SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006), 43. by Tim Van den Bulcke, Koenraad Van Leemput, Bart Naudts, et al.Piet van Remortel, Hongwu Ma, Alain Verschoren, Bart De Moor, Kathleen Marchal posted to bioinfo network network_simulator simulation_data by tonamswish on 2009-05-21 21:40:48 as along with 6 people poirel ptrobajo Ayest tvdbulck frohike ajgentles
	Integration of biological networks and gene expression data using Cytoscape. [My Copy] Nature protocols, Vol. 2, No. 10. (27 September 2007), pp. 2366-2382. by Melissa S. Cline, Michael Smoot, Ethan Cerami, et al.Allan Kuchinsky, Nerius Landys, Chris Workman, Rowan Christmas, Iliana Avila-Campilo, Michael Creech, Benjamin Gross, Kristina Hanspers, Ruth Isserlin, Ryan Kelley, Sarah Killcoyne, Samad Lotia, Steven Maere, John Morris, Keiichiro Ono, Vuk Pavlovic, Alexander R. Pico, Aditya Vailaya, Peng-Liang L. Wang, Annette Adler, Bruce R. Conklin, Leroy Hood, Martin Kuiper, Chris Sander, Ilya Schmulevich, Benno Schwikowski, Guy J. Warner, Trey Ideker, Gary D. Bader posted to cytoscape network ppi by tonamswish on 2009-05-20 22:34:35 as along with 19 people and 1 group daveGerrard greg badi ptrobajo daforerog bertelsen Cortel cswinburne giovenko isimpson emmackinnon yaredo Stew guhjy jfr shikin shung thomaskelder AlexanderPico GeneGo
	Exploring biological networks with Cytoscape software. [My Copy] Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], Vol. Chapter 8 (September 2008) by N. Yeung, M. S. Cline, A. Kuchinsky, M. E. Smoot, G. D. Bader posted to cytoscape network by tonamswish on 2009-05-20 22:32:57 as along with 4 people cswinburne giovenko reyez sjcockell
	Validation of candidate causal genes for obesity that affect shared metabolic pathways and networks. [My Copy] Nature genetics, Vol. 41, No. 4. (08 April 2009), pp. 415-423. by Xia Yang, Joshua L. Deignan, Hongxiu Qi, et al.Jun Zhu, Su Qian, Judy Zhong, Gevork Torosyan, Sana Majid, Brie Falkard, Robert R. Kleinhanz, Jenny Karlsson, Lawrence W. Castellani, Sheena Mumick, Kai Wang, Tao Xie, Michael Coon, Chunsheng Zhang, Daria Estrada-Smith, Charles R. Farber, Susanna S. Wang, Atila van Nas, Anatole Ghazalpour, Bin Zhang, Douglas J. Macneil, John R. Lamb, Katrina M. Dipple, Marc L. Reitman, Margarete Mehrabian, Pek Y. Lum, Eric E. Schadt, Aldons J. Lusis, Thomas A. Drake posted to network by tonamswish on 2009-04-28 01:53:14 as along with 7 people shikin ipark-kaist sameersoi renatomilani guhjy tmmurali bertrandservin
	An Extended Transcriptional Network for Pluripotency of Embryonic Stem Cells [My Copy] Cell, Vol. 132, No. 6. (21 March 2008), pp. 1049-1061. by J. Kim posted to h3k27me3 h3k4me3 network stem tf transcription by tonamswish on 2009-04-13 18:32:05 as along with 7 people balabu shikin tmmurali maralena guhjy kengg inesdesantiago

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microrna	208
review	177
bioinfo	158
cancer	149
tool	100
stem	89
emt	64
breast_cancer	46
breast	36
chromatin	33
network	33
tf	32
mrnaarray	31
metastasis	29
era	27
differentiation	26
er	23
histone_modification	22
ovary	22
histone	21
chip-seq	21
mrna	20
gene_signature	19
nfkb	19
pathway	18
promoter	18
human	18
epigenetics	18
let-7	17
cancer_stem_cell	16
lin28	15
gsea	15
hypoxia	15
p53	14
mirna	13
dna_methylation	13
bayesian	12
micrornaarray	12
pluripotency	12
tss	12
pirna	12
nucleosome	11
mir-21	11
mouse	11
ncrna	10
tgfb	10
repeat	10
simulation_data	10
e-cadherin	10
expression_profiles	10
inflammation	10
cmyc	10
chip-chip	10
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co-clustering	9
network_simulator	9
enhancer	9
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pol2	8
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akt	7
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erk5	7
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ras	7
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ago	6
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met	5
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mta1	5
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zeb2	5
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dicer	5
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ppi	5
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wnt	5
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rac	5
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mir-143	5
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notch	4
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protocol	4
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erk	4
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hur	4
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mir-200c	3
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colon	3
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structure	3
er_target	3
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mek5	3
circadian_clock	3
epithelial	3
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mir-302	3
chip_seq	3
mir-31	3
ovarian_cancer	3
egf	3
mir-206	3
model	3
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kinetic_model	3
tnfa	3
multivariate	3
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snail	3
fgf2	3
mir-223	2
cell_proliferation	2
dnase1	2
mir-130	2
immunology	2
ire	2
ras_pathway	2
erk_pathway	2
mir-200a	2
ybx1	2
cross_correlation	2
axon_guidance	2
h3k36me3	2
c_elegans	2
rac1	2
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akt_pathway	2
wnt5a	2
pcg	2
src	2
pol	2
ros	2
hat	2
lna	2
bicluster	2
normalization	2
runx2	2
mir-92	2
mir-295	2
sbml	2
fusion_gene	2
pax6	2
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immue	2
atxn1	2
transcriptome	2
regulatory_element	2
hormone_receptor	2
mir-23a-27a-24-2	2
mir-328	2
pak1	2
mir-34	2
splicing	2
mir-7	2
colon_cancer	2
transfac	2
mir-106	2
mir-137	2
arnt	2
bmp6	2
chromatin_remodeling_enzyme	2
ampk	2
mir-141	2
e2f1	2
clock	2
hmga2	2
mir-133	2
klf4	2
erb	2
dgcr8	2
swi	2
integrin	2
protein_interaction	2
probabilistic_learning	2
synthetic	2
mir-15b	2
neurogenesis	2
cd24_neg	2
gsk3	2
erbb	2
cluster	2
slug	2
circadian	2
human_embryonic_stem_cells	2
mir-15a	2
repetitive_elements	2
sequence_analysis	2
b_catenin	2
er_negative	2
stem_cells	2
rna_secondary_structure_prediction	2
erbb2	2
skin	2
switchgear	2
clustering	2
melanoma	2
mek	2
cyclin_d1	2
mitf	2
cell	2
rac3	2
chd1	2
eponine	2
microrna_processing	2
growth_factor	2
mir-134	2
hif1	2
erk1	2
physicochemical	2
lung_adenocarcinoma	2
transdifferentiation	2
p63	2
sip1	2
srf	2
vegf	2
autoclass	2
bmi1	2
pr	2
raf	2
cdc25a	2
colorectal	2
mir-18a	2
14-3-3zeta	2
erk2	2
cell_growth	2
mir-451	2
bioconductor	2
egfr	2
kegg	2
drosophila	2
biogenesis	2
mir-290	2
learning	2
mir-367	2
h3k4me2	2
image	2
mir-107	2
sox9	1
glm	1
vegfr	1
mad3	1
let-7b	1
lgf2	1
lysine	1
tumor_growth	1
mir-16-1	1
rpb	1
ahr	1
piwi	1
tirna	1
mir-34c	1
cd44	1
human_embryonic_stem_cell	1
genetic_interaction	1
smad4	1
nmf	1
h3k9	1
tutorial	1
ternay_structure	1
gli1	1
yb	1
cell_type_specific	1
evf2	1
cymc	1
upa	1
biomarker	1
tlx	1
ritonavir	1
grn	1
dnmto	1
upf1	1
regulatory_network	1
cadherin	1
smo	1
lnn	1
mcf10	1
dlx2	1
polycomb	1
computational_method	1
mir-29	1
mir-331	1
h3k79me3	1
max	1
mir-22	1
apt1	1
bak1	1
mir-429	1
bcrp	1
tlr4	1
blimp1	1
sgs3	1
findpeak	1
mammary_epithelial_cells	1
mir-24	1
hoxd4	1
yeast	1
kdm1b	1
mir-298	1
em	1
risc	1
liplid	1
phosphoinositide_3_kinase	1
endometrial_cancer	1
actin_cytoskeleton	1
mir-183	1
mir-34b	1
jnk	1
cxcr4	1
marcks	1
commerical	1
myb	1
sesn1	1
p38_mapk	1
spheroid	1
n-cadherin	1
hif2a	1
genetic_linkage	1
next_generation	1
regulatory_circuitry	1
gli2	1
metformin	1
mta	1
mei-p26	1
food_nutrition	1
small_rna	1
let-7i	1
rbl2	1
mta3	1
lecture	1
rna_secondary_structure	1
osteoblast_differentiation	1
antagomir	1
rab3b	1
nurd	1
tak1	1
peakfinder	1
lung_metastasis	1
pou5f1	1
set9	1
question	1
cyclin_	1
pttg1	1
correlation_analysis	1
notch3	1
mtorc1	1
tgfb_smad	1
oncogene	1
lif	1
recurrence	1
fgf1	1
eed	1
mir-135b	1
colorectal_cancer	1
tumor_suppressor	1
p38	1
alt	1
germ	1
artery	1
tcf	1
e-map	1
foxg1	1
mir-169	1
acetylation	1
module	1
hoxd10	1
pbody	1
bcl7a	1
biclustering	1
gene	1
intragenic	1
rbm3	1
cbp	1
cdc	1
genetic_instability	1
mir-19	1
expression	1
proteomics	1
runx1	1
lncrna	1
mir-330	1
mir-133b	1
akt2	1
decidualization	1
mir-124	1
camkii	1
prc2	1
per	1
glioma	1
leukocyte	1
cell_survival	1
tov_112d	1
fgfr	1
dnmt3	1
e2	1
clustering_tool	1
mir-338-3p	1
snf	1
fgfr2	1
let-7c	1
mir-196a-2	1
mir-101	1
helicase	1

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