tonamswish's tf [32 articles] Export

Recent papers added to tonamswish's library classified by the tag tf. You can also see everyone's tf.

	MicroRNA-Mediated Inhibition of Prostate-Derived Ets Factor Messenger RNA Translation Affects Prostate-Derived Ets Factor Regulatory Networks in Human Breast Cancer [My Copy] Cancer Res, Vol. 68, No. 20. (15 October 2008), pp. 8499-8506. by Victoria J. Findlay, David P. Turner, Omar Moussa, Dennis K. Watson posted to tf microrna ets breast_cancer by tonamswish on 2009-11-17 04:11:47 as along with 1 group microRNA
	The transcription factor ARNT functions as an estrogen receptor beta selective co-activator, and its recruitment to alternative pathways mediates anti-estrogenic effects of TCDD [My Copy] Mol Endocrinol (8 November 2007), me.2007-0128. by Joelle Ruegg, Elin Swedenborg, David Wahlstrom, et al.Aurelie Escande, Patrick Balaguer, Katarina Pettersson, Ingemar Pongratz posted to tf erb er co-activator arnt by tonamswish on 2009-11-16 18:15:24 as
	Gene Regulation by Transcription Factors and MicroRNAs [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1785-1786. by Oliver Hobert posted to tf review microrna-tf microrna by tonamswish on 2009-11-13 22:51:48 as along with 14 people and 1 group danaiancu megraw valeriehilgers guhjy inesdesantiago jfr ealloza zwang biomcgary heliopais emptyhb maralena bootsy siebert microRNA
	Motif-directed network component analysis for regulatory network inference [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 1. (2008), S21. by Chen Wang, Jianhua Xuan, Li Chen, et al.Po Zhao, Yue Wang, Robert Clarke, Eric Hoffman posted to tf regulatory_network network bioinfo by tonamswish on 2009-11-04 20:12:32 as along with 3 people topsoil roys guhjy
	Increased MicroRNA Activity in Human Cancers [My Copy] PLoS ONE, Vol. 4, No. 6. (25 June 2009), e6045. by Ariel Israel, Roded Sharan, Eytan Ruppin, Eithan Galun posted to tf mrnaarray microrna-mrna microrna bioinfo by tonamswish on 2009-11-02 14:31:27 as along with 3 people and 1 group guhjy frohike ealloza microRNA
	CisModule: De novo discovery of cis-regulatory modules by hierarchical mixture modeling [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 33. (17 August 2004), pp. 12114-12119. by Qing Zhou, Wing H. Wong posted to tool tf hmm crm bioinfo by tonamswish on 2009-10-30 14:00:29 as along with 4 people and 1 group isimpson indigoviolet dpollard ep161302 EisenLab
	An Integrated Approach to Identifying Cis-Regulatory Modules in the Human Genome [My Copy] PLoS ONE, Vol. 4, No. 5. (12 May 2009), e5501. by Kyoung-Jae Won, Saurabh Agarwal, Li Shen, Robert Shoemaker, Bing Ren, Wei Wang posted to tool tf hmm chip-seq bioinfo by tonamswish on 2009-10-27 03:01:09 as along with 3 people and 1 group guhjy idonaldson cisevol BergmanLab
	Core Transcriptional Regulatory Circuitry in Human Embryonic Stem Cells [My Copy] Vol. 122, No. 6. (23 September 2005), pp. 947-956. by Laurie A. Boyer, Tong I. Lee, Megan F. Cole, et al.Sarah E. Johnstone, Stuart S. Levine, Jacob P. Zucker, Matthew G. Guenther, Roshan M. Kumar, Heather L. Murray, Richard G. Jenner, David K. Gifford, Douglas A. Melton, Rudolf Jaenisch, Richard A. Young posted to tf stem sox2 oct4 nanog embryonic_stem_cell embryonic binding_motif by tonamswish on 2009-10-06 15:29:21 as
	An intragenic MEF2-dependent enhancer directs muscle-specific expression of microRNAs 1 and 133 [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 52. (26 December 2007), pp. 20844-20849. by Ning Liu, Andrew H. Williams, Yuri Kim, et al.John McAnally, Svetlana Bezprozvannaya, Lillian B. Sutherland, James A. Richardson, Rhonda Bassel-Duby, Eric N. Olson posted to tss tf muscle mir-133 mir-1 microrna mef2 enhancer by tonamswish on 2009-10-05 19:24:12 as along with 3 people and 1 group maximilianh maralena bootsy microRNA
	MicroRNA: basic mechanisms and transcriptional regulatory networks for cell fate determination [My Copy] Cardiovasc Res, Vol. 79, No. 4. (1 September 2008), pp. 553-561. by Francesco Fazi, Clara Nervi posted to tss tf review microrna by tonamswish on 2009-10-05 18:34:44 as along with 1 group microRNA
	TransmiR: a transcription factor-microRNA regulation database. [My Copy] Nucleic acids research (28 September 2009), gkp803. by Juan Wang, Ming Lu, Chengxiang Qiu, Qinghua Cui posted to tf microrna database bioinfo by tonamswish on 2009-09-29 15:10:33 as along with 7 people and 2 groups guhjy frohike daforerog epinatel heliopais ealloza samgj cube_and_beyond microRNA
	Identification of novel AP-1 target genes in fibroblasts regulated during cutaneous wound healing [My Copy] Oncogene, Vol. 23, No. 42. (26 July 2004), pp. 7005-7017. by Lore Florin, Lars Hummerich, Bernd T. Dittrich, et al.Felix Kokocinski, Gunnar Wrobel, Sabine Gack, Marina Schorpp-Kistner, Sabine Werner, Meinhard Hahn, Peter Lichter, Axel Szabowski, Peter Angel posted to tf jun fgf7 ap1 by tonamswish on 2009-09-16 14:22:07 as
	Biochem. Soc. Trans (2004) 32, 443-446 - R.L. Juliano and others - Molecular Environment of Integrins [My Copy] posted to tf review ras rac pak integrin erk_pathway by tonamswish on 2009-09-15 23:18:42 as
	MicroRNA Discovery and Profiling in Human Embryonic Stem Cells by Deep Sequencing of Small RNA Libraries [My Copy] Stem Cells, Vol. 26, No. 10. (1 October 2008), pp. 2496-2505. by Merav Bar, Stacia K. Wyman, Brian R. Fritz, et al.Junlin Qi, Kavita S. Garg, Rachael K. Parkin, Evan M. Kroh, Ausra Bendoraite, Patrick S. Mitchell, Angelique M. Nelson, Walter L. Ruzzo, Carol Ware, Jerald P. Radich, Robert Gentleman, Hannele Ruohola-Baker, Muneesh Tewari posted to tss tf stem microrna eponine embryonic_stem_cells deep_sequencing by tonamswish on 2009-09-15 14:28:02 as along with 5 people and 1 group heliopais ealloza valeriehilgers myzhang inesdesantiago microRNA
	The interplay between transcription factors and microRNAs in genome-scale regulatory networks [My Copy] BioEssays, Vol. 31, No. 4. (April 2009), pp. 435-445. by Natalia J. Martinez, Albertha J. M. Walhout posted to tf review ppi network microrna by tonamswish on 2009-09-14 22:45:21 as along with 4 people and 1 group heliopais inesdesantiago guhjy ealloza microRNA
	Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells [My Copy] Vol. 134, No. 3. (8 August 2008), pp. 521-533. by Alexander Marson, Stuart S. Levine, Megan F. Cole, et al.Garrett M. Frampton, Tobias Brambrink, Sarah Johnstone, Matthew G. Guenther, Wendy K. Johnston, Marius Wernig, Jamie Newman, J. Mauro Calabrese, Lucas M. Dennis, Thomas L. Volkert, Sumeet Gupta, Jennifer Love, Nancy Hannett, Phillip A. Sharp, David P. Bartel, Rudolf Jaenisch, Richard A. Young posted to tf stem microrna embryonic_stem_cells by tonamswish on 2009-09-14 20:09:52 as along with 2 people fishtank gdb
	The MicroRNA miR-1 Regulates a MEF-2-Dependent Retrograde Signal at Neuromuscular Junctions [My Copy] Vol. 133, No. 5. (30 May 2008), pp. 903-915. by David J. Simon, Jon M. Madison, Annie L. Conery, et al.Katherine L. Thompson-Peer, Michael Soskis, Gary B. Ruvkun, Joshua M. Kaplan, John K. Kim posted to tf rab3b muscle mir-1 microrna mef2 by tonamswish on 2009-09-13 05:20:43 as along with 1 group microRNA
	Y-box factor YB1 controls p53 apoptotic function [My Copy] Oncogene, Vol. 24, No. 56. (12 September 2005), pp. 8314-8325. by Craig Homer, Deborah A. Knight, Lynne Hananeia, et al.Philip Sheard, Joanna Risk, Annette Lasham, Janice A. Royds, Antony W. Braithwaite posted to ybx1 yb1 tf p53 apoptosis by tonamswish on 2009-09-13 04:56:02 as
	YB-1 Translational Control of Epithelial-Mesenchyme Transition [My Copy] Cancer Cell, Vol. 15, No. 5. (05 May 2009), pp. 357-359. by Ghassan Mouneimne, Joan S. Brugge posted to ybx1 yb1 yb tf ras_pathway ptp1b pathway emt by tonamswish on 2009-09-13 04:43:30 as along with 1 person guhjy
	oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes [My Copy] Nucl. Acids Res., Vol. 33, No. 10. (2 June 2005), pp. 3154-3164. by Shannan J. Ho Sui, James R. Mortimer, David J. Arenillas, et al.Jochen Brumm, Christopher J. Walsh, Brian P. Kennedy, Wyeth W. Wasserman posted to web_server tool tf pssm bioinfo by tonamswish on 2009-08-18 22:30:41 as along with 6 people and 1 group avilella inesdesantiago bryankr heliopais tmmurali gpalidwor Ensembl Compara citations
	DiRE: identifying distant regulatory elements of co-expressed genes [My Copy] Nucl. Acids Res., Vol. 36, No. suppl_2. (1 July 2008), pp. W133-139. by Valer Gotea, Ivan Ovcharenko posted to web_server tf mrnaarray enhancer bioinfo by tonamswish on 2009-08-18 22:28:37 as along with 4 people wowalz heliopais Borelli idonaldson
	Nucleosome organization in the Drosophila genome [My Copy] Nature, Vol. 453, No. 7193. (13 April 2008), pp. 358-362. by Travis N. Mavrich, Cizhong Jiang, Ilya P. Ioshikhes, et al.Xiaoyong Li, Bryan J. Venters, Sara J. Zanton, Lynn P. Tomsho, Ji Qi, Robert L. Glaser, Stephan C. Schuster, David S. Gilmour, Istvan Albert, B. Franklin Pugh posted to histone histone_modification nucleosome tf tss by tonamswish on 2009-07-23 15:37:41 as along with 7 people bpcusack taroleo nklee djkt megraw emptyhb yoonk
	The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line. [My Copy] Nature genetics, Vol. 41, No. 5. (19 May 2009), pp. 553-562. by FANTOM Consortium, Harukazu Suzuki, Alistair R. Forrest, et al.Erik van Nimwegen, Carsten O. Daub, Piotr J. Balwierz, Katharine M. Irvine, Timo Lassmann, Timothy Ravasi, Yuki Hasegawa, Michiel J. de Hoon, Shintaro Katayama, Kate Schroder, Piero Carninci, Yasuhiro Tomaru, Mutsumi Kanamori-Katayama, Atsutaka Kubosaki, Altuna Akalin, Yoshinari Ando, Erik Arner, Maki Asada, Hiroshi Asahara, Timothy Bailey, Vladimir B. Bajic, Denis Bauer, Anthony G. Beckhouse, Nicolas Bertin, Johan Björkegren, Frank Brombacher, Erika Bulger, Alistair M. Chalk, Joe Chiba, Nicole Cloonan, Adam Dawe, Josee Dostie, Pär G. Engström, Magbubah Essack, Geoffrey J. Faulkner, J. Lynn Fink, David Fredman, Ko Fujimori, Masaaki Furuno, Takashi Gojobori, Julian Gough, Sean M. Grimmond, Mika Gustafsson, Megumi Hashimoto, Takehiro Hashimoto, Mariko Hatakeyama, Susanne Heinzel, Winston Hide, Oliver Hofmann, Michael Hörnquist, Lukasz Huminiecki, Kazuho Ikeo, Naoko Imamoto, Satoshi Inoue, Yusuke Inoue, Ryoko Ishihara, Takao Iwayanagi, Anders Jacobsen, Mandeep Kaur, Hideya Kawaji, Markus C. Kerr, Ryuichiro Kimura, Syuhei Kimura, Yasumasa Kimura, Hiroaki Kitano, Hisashi Koga, Toshio Kojima, Shinji Kondo, Takeshi Konno, Anders Krogh, Adele Kruger, Ajit Kumar, Boris Lenhard, Andreas Lennartsson, Morten Lindow, Marina Lizio, Cameron Macpherson, Norihiro Maeda, Christopher A. Maher, Monique Maqungo, Jessica Mar, Nicholas A. Matigian, Hideo Matsuda, John S. Mattick, Stuart Meier, Sei Miyamoto, Etsuko Miyamoto-Sato, Kazuhiko Nakabayashi, Yutaka Nakachi, Mika Nakano, Sanne Nygaard, Toshitsugu Okayama, Yasushi Okazaki, Haruka Okuda-Yabukami, Valerio Orlando, Jun Otomo, Mikhail Pachkov, Nikolai Petrovsky, Charles Plessy, John Quackenbush, Aleksandar Radovanovic, Michael Rehli, Rintaro Saito, Albin Sandelin, Sebastian Schmeier, Christian Schönbach, Ariel S. Schwartz, Colin A. Semple, Miho Sera, Jessica Severin, Katsuhiko Shirahige, Cas Simons, George St Laurent, Masanori Suzuki, Takahiro Suzuki, Matthew J. Sweet, Ryan J. Taft, Shizu Takeda, Yoichi Takenaka, Kai Tan, Martin S. Taylor, Rohan D. Teasdale, Jesper Tegnér, Sarah Teichmann, Eivind Valen, Claes Wahlestedt, Kazunori Waki, Andrew Waterhouse, Christine A. Wells, Ole Winther, Linda Wu, Kazumi Yamaguchi, Hiroshi Yanagawa, Jun Yasuda, Mihaela Zavolan, David A. Hume, Riken Omics Science Center, Takahiro Arakawa, Shiro Fukuda, Kengo Imamura, Chikatoshi Kai, Ai Kaiho, Tsugumi Kawashima, Chika Kawazu, Yayoi Kitazume, Miki Kojima, Hisashi Miura, Kayoko Murakami, Mitsuyoshi Murata, Noriko Ninomiya, Hiromi Nishiyori, Shohei Noma, Chihiro Ogawa, Takuma Sano, Christophe Simon, Michihira Tagami, Yukari Takahashi, Jun Kawai, Yoshihide Hayashizaki posted to cell_growth differentiation network tf by tonamswish on 2009-06-10 13:55:22 as along with 15 people schwartzjmc rdiaz rsaito guhjy hagechouchin443 gdb burak YukaH coela mtagaya bertelsen xingxu TRHvidsten renatomilani antonkratz
	A transcription factor affinity-based code for mammalian transcription initiation [My Copy] Genome Research, Vol. 19, No. 4. (13 April 2009), pp. 644-656. by Molly Megraw, Fernando Pereira, Shane T. Jensen, Uwe Ohler, Artemis G. Hatzigeorgiou posted to microrna tf tss by tonamswish on 2009-06-04 19:01:41 as along with 9 people and 1 group heliopais guhjy rpatward siebert biozhang2001 absterga jbhiatt samgj daforerog microRNA
	Estrogen-Regulated Gene Networks in Human Breast Cancer Cells: Involvement of E2F1 in the Regulation of Cell Proliferation [My Copy] Mol Endocrinol, Vol. 21, No. 9. (1 September 2007), pp. 2112-2123. by Joshua D. Stender, Jonna Frasor, Barry Komm, Ken C. Chang, Lee W. Kraus, Benita S. Katzenellenbogen posted to breast cancer era genomica tf by tonamswish on 2009-05-28 20:21:00 as
	An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells. [My Copy] Nature structural & molecular biology (11 January 2009) by Gene W W. Yeo, Nicole G G. Coufal, Tiffany Y Y. Liang, Grace E E. Peng, Xiang-Dong D. Fu, Fred H H. Gage posted to chip-seq fox2 splicing stem tf by tonamswish on 2009-05-26 18:25:57 as along with 1 person cassj
	Mapping Key Features of Transcriptional Regulatory Circuitry in Embryonic Stem Cells. [My Copy] Cold Spring Harbor symposia on quantitative biology (6 November 2008) by M F F. Cole, R A A. Young posted to embryonic stem tf by tonamswish on 2009-05-19 18:57:43 as
	Histone H3 Lysine 56 Acetylation Is Linked to the Core Transcriptional Network in Human Embryonic Stem Cells [My Copy] Molecular Cell, Vol. 33, No. 4. (27 February 2009), pp. 417-427. by Wei Xie, Chunying Song, Nicolas L. Young, et al.Adam S. Sperling, Feng Xu, Rupa Sridharan, Anne E. Conway, Benjamin A. Garcia, Kathrin Plath, Amander T. Clark posted to h3k56ac human stem tf by tonamswish on 2009-04-27 14:03:29 as along with 1 person inesdesantiago
	An Extended Transcriptional Network for Pluripotency of Embryonic Stem Cells [My Copy] Cell, Vol. 132, No. 6. (21 March 2008), pp. 1049-1061. by Jonghwan Kim, Jianlin Chu, Xiaohua Shen, Jianlong Wang, Stuart H. Orkin posted to h3k27me3 h3k4me3 network stem tf transcription by tonamswish on 2009-04-13 18:32:05 as along with 6 people shikin tmmurali maralena guhjy kengg inesdesantiago
	Mei-P26 regulates microRNAs and cell growth in the Drosophila ovarian stem cell lineage [My Copy] Nature (04 June 2008) by Ralph A. Neumüller, Joerg Betschinger, Anja Fischer, et al.Natascha Bushati, Ingrid Poernbacher, Karl Mechtler, Stephen M. Cohen, Juergen A. Knoblich posted to drosophila mei-p26 microrna stem tf by tonamswish on 2009-04-02 16:31:37 as along with 2 people and 1 group valeriehilgers delenca microRNA
	The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells. [My Copy] Nature genetics, Vol. 38, No. 4. (05 April 2006), pp. 431-440. by Yuin-Han H. Loh, Qiang Wu, Joon-Lin L. Chew, et al.Vinsensius B. Vega, Weiwei Zhang, Xi Chen, Guillaume Bourque, Joshy George, Bernard Leong, Jun Liu, Kee-Yew Y. Wong, Ken W. Sung, Charlie W. Lee, Xiao-Dong D. Zhao, Kuo-Ping P. Chiu, Leonard Lipovich, Vladimir A. Kuznetsov, Paul Robson, Lawrence W. Stanton, Chia-Lin L. Wei, Yijun Ruan, Bing Lim, Huck-Hui H. Ng posted to tf stem oct4 nanog mouse embryonic chip-pet binding_motif by tonamswish on 2009-03-30 16:09:40 as along with 11 people isimpson inesdesantiago guhjy cmmorel gpalidwor brixtonmc vega eukfn mikaelhuss idonaldson tdmckee
	Identification of regulatory modules by co-clustering latent variable models: stem cell differentiation [My Copy] Bioinformatics, Vol. 22, No. 16. (15 August 2006), pp. 2005-2011. by Je-Gun Joung, Dongho Shin, Rho H. Seong, Byoung-Tak Zhang posted to tf stem co-clustering bioinfo by tonamswish on 2009-03-30 15:37:30 as along with 1 person hplatero

Note: You may cite this page as: http://www.citeulike.org/user/tonamswish/tag/tf

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cyclin_	1
cyclin_b	1
cyclin_e	1
cymc	1
cytokine	1
david	1
decidualization	1
dlx2	1
dlx6	1
dna	1
dna_methylomes	1
dnmt1	1
dnmt3	1
dnmto	1
dot1l	1
drug	1
dsfmbt	1
e2	1
e_cadherin	1
eed	1
elk1	1
em	1
e-map	1
embrynoic	1
emi	1
endcrine	1
endometrial_cancer	1
endotoxemia	1
ep300	1
epig	1
erbb3	1
erk_signaling	1
ets	1
euchromatin	1
evf2	1
evolution	1
exon_tethering	1
expression	1
fascin	1
feed_foward	1
fgf1	1
fgf7	1
fgfr	1
fgfr2	1
findpeak	1
food_nutrition	1
fox2	1
foxg1	1
foxo	1
foxp3	1
fscn1	1
future_study	1
g9a	1
gastric_cancer	1
gems	1
gene	1
genetic_instability	1
genetic_interaction	1
genetic_linkage	1
genmir	1
genome_rearrangement	1
genomica	1
germ	1
gli	1
gli1	1
gli2	1
glial_cells	1
glioblastoma	1
glioma	1
glm	1
glucocorticoid_receptor	1
gnuplot	1
gr	1
grn	1
growth	1
h2ax	1
h3k4	1
h3k4me1	1
h3k56ac	1
h3k79me3	1
h3k9	1

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