tuck's watchlist [more than 800 articles] Export

Recent papers matching tuck's watchlist criteria

	Windshield splatter analysis with the Galaxy metagenomic pipeline [My Copy] Genome Research, Vol. 19, No. 11. (9 November 2009), pp. 2144-2153. by Sergei Kosakovsky Pond, Samir Wadhawan, Francesca Chiaromonte, et al.Guruprasad Ananda, Wen-Yu Chung, James Taylor, Anton Nekrutenko posted to software community-genomics bioinformatics by jmeppley on 2009-11-12 15:33:33 as along with 8 people and 2 groups seb1 Katje djkt operon neils idonaldson jgill kshameer microbiology_nijmegen iSEEM
	Why Most Published Research Findings Are False [My Copy] PLoS Med, Vol. 2, No. 8. (30 August 2005), pp. 696-701. by John P. A. Ioannidis posted to for:arne systems-biology statistics scientific-method science research reproducibility philosophy experimentation experiment-design experiment-description epidemiology culture biology bioinformatics by lord_weldaan on 2009-11-12 12:15:47 as along with 87 people and 12 groups rubenroa aaltenburger lafuente alexhakkinen NIlz polivares yyfwuhan zzb3886 amargoli CulCog jenniferwilms Stew eshirdel ckai1 monkare scmelton LSK thegoose johntdelaney virolog olberd robertlischke cobi flieder arsyed mrt2k9 schoeband steve3001 paleorthid pawelsobko mzkbnt memming mutesa donnachie apgaylard haloin bhengeveld yangjustinc jago Tomste richardh daforerog kristinchapman FeltonM7675 pengchy ajaymalik gbodner neteler mixedman Zephyrus rklancer guhjy sebpaquet garyfeng monod Borelli jmeppley chad_davis Najamuddin irinas indigoviolet mwyarbro ddahlem dullhunk madhadron balabu jiyu msierk Imat lmi_swap chenlc03 biblio24 pratap kevinemamy cjeans feipan arne suizan jasonbobe austin lonettma buggle dnugent Malc elsbury shoshin achinerarias Bioinformatics - CRUK raftlondon STS Method_Engineering_Services Convention on Knowledge Commons Anesthesia and Acute Pain UCD SILS IS40340 Research Practice Roswell Cancer Crosstalk ReadingLab EisenLab Sciences_communication_societe dIEMoSIRIS
	Doing sequence analysis with your printer [My Copy] Comput. Appl. Biosci., Vol. 9, No. 4. (1 August 1993), pp. 421-426. by D. B. Searls posted to software curiosity bioinformatics 1993 by hpaces on 2009-11-12 06:44:35 as
	Scratchpads: a data-publishing framework to build, share and manage information on the diversity of life [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 14. (2009), S6. by Vincent Smith, Simon Rycroft, Kehan Harman, Ben Scott, David Roberts posted to social research bioinformatics biodiversity by operon on 2009-11-11 03:53:05 as along with 2 people dullhunk dgovoni
	Designing Efficient User-Friendly Biological Data Management Systems [My Copy] OMICS: A Journal of Integrative Biology, Vol. 7, No. 1. (January 2003), pp. 113-115. by Zoe Lacroix posted to bioinformatics by tjtaylor on 2009-11-10 22:25:10 as
	The Biomolecular Interaction Network Database and related tools 2005 update [My Copy] Nucl. Acids Res., Vol. 33, No. suppl_1. (1 January 2005), pp. D418-424. by C. Alfarano, C. E. Andrade, K. Anthony, et al.N. Bahroos, M. Bajec, K. Bantoft, D. Betel, B. Bobechko, K. Boutilier, E. Burgess, K. Buzadzija, R. Cavero, C. D'Abreo, I. Donaldson, D. Dorairajoo, M. J. Dumontier, M. R. Dumontier, V. Earles, R. Farrall, H. Feldman, E. Garderman, Y. Gong, R. Gonzaga, V. Grytsan, E. Gryz, V. Gu, E. Haldorsen, A. Halupa, R. Haw, A. Hrvojic, L. Hurrell, R. Isserlin, F. Jack, F. Juma, A. Khan, T. Kon, S. Konopinsky, V. Le, E. Lee, S. Ling, M. Magidin, J. Moniakis, J. Montojo, S. Moore, B. Muskat, I. Ng, J. P. Paraiso, B. Parker, G. Pintilie, R. Pirone, J. J. Salama, S. Sgro, T. Shan, Y. Shu, J. Siew, D. Skinner, K. Snyder, R. Stasiuk, D. Strumpf, B. Tuekam, S. Tao, Z. Wang, M. White, R. Willis, C. Wolting, S. Wong, A. Wrong, C. Xin, R. Yao, B. Yates, S. Zhang, K. Zheng, T. Pawson, B. F. F. Ouellette, C. W. V. Hogue posted to protein-protein bioinformatics by flbarroso on 2009-11-10 16:49:30 as
	Bioinformatics Services Discovery Using Ontology Classification [My Copy] Services, IEEE Congress on In Services, 2007 IEEE Congress on, Vol. 0 (2007), pp. 106-113. by Herve Menager, Zoe Lacroix, Pierre Tuffery posted to semantic_map ontology bioinformatics by tjtaylor on 2009-11-10 16:27:57 as along with 1 person dullhunk
	Genome-wide identification of human functional DNA using a neutral indel model. [My Copy] PLoS computational biology, Vol. 2, No. 1. (13 January 2006) by Gerton Lunter, Chris P. Ponting, Jotun Hein posted to modeling indel human genomics bioinformatics by timflutre on 2009-11-10 14:01:49 as along with 12 people and 2 groups gjuggler nklee aprasad eckart_bindewald eweaver lhonigberg acidwizard juliettecolinas bpcusack Stew cisevol mailund EisenLab cis-regulatory-evolution
	An empirical Bayesian approach for model-based inference of cellular signaling networks [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 371. by David Klinke posted to signaling network modelling bioinformatics by renatomilani on 2009-11-10 13:36:35 as along with 1 person cmzmasek
	State of the nation in data integration for bioinformatics [My Copy] Journal of Biomedical Informatics, Vol. 41, No. 5. (5 October 2008), pp. 687-693. by C. Goble, R. Stevens posted to workflows web-services standards semantics review data-integration bioinformatics by pmendes on 2009-11-10 13:20:54 as along with 11 people mtaschuk druvus simonmcbride agbiotec fgibson guhjy dullhunk cjhall alanrw winterschlaefer dansullivanblk
	A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms [My Copy] PLoS Comput Biol, Vol. 3, No. 9. (14 September 2007), e176. by Erika M. Kvikstad, Svitlana Tyekucheva, Francesca Chiaromonte, Kateryna D. Makova posted to statistics phylogeny indel human chimpanzee bioinformatics alignment by timflutre on 2009-11-10 12:58:06 as along with 4 people and 1 group Iden-J_GluR aprasad djkt cisevol cis-regulatory-evolution
	STITCH 2: an interaction network database for small molecules and proteins [My Copy] Nucl. Acids Res. (6 November 2009), gkp937. by Michael Kuhn, Damian Szklarczyk, Andrea Franceschini, et al.Monica Campillos, Christian von Mering, Lars J. Jensen, Andreas Beyer, Peer Bork posted to ressource drugdiscovery database bioinformatics by Yanno on 2009-11-10 09:37:20 as along with 1 person neils
	The Rough Guide to In Silico Function Prediction, or How To Use Sequence and Structure Information To Predict Protein Function [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000160. by Marco Punta, Yanay Ofran posted to protein prediction function bioinformatics by pansapiens on 2009-11-10 01:05:23 as along with 19 people and 1 group kiekyon Thaverkamp niallhaslam daforerog Zalanszabo bpcusack Katje joseph_x_zhou taguchi sjcockell markchen ptrobajo chad_davis druvus mdstobbe giovenko nilanjanroy reyez GeeSharpMinor microbiology_nijmegen
	GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists. [My Copy] Genome biology, Vol. 8, No. 1. (04 January 2007), R3. by Pedro Carmona-Saez, Monica Chagoyen, Francisco Tirado, Jose M. Carazo, Alberto Pascual-Montano posted to software genomics bioinformatics annotation by operon on 2009-11-09 21:52:55 as along with 6 people and 1 group Thaverkamp ptrobajo aalibes jfr ealloza yas BioinfoCIPF
	Web services at the European Bioinformatics Institute-2009 [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W6-10. by Hamish Mcwilliam, Franck Valentin, Mickael Goujon, et al.Weizhong Li, Menaka Narayanasamy, Jenny Martin, Teresa Miyar, Rodrigo Lopez posted to web_services ebi database bioinformatics by jeargle on 2009-11-09 21:36:18 as along with 14 people and 1 group artaban421 n00c daforerog dswan guhjy cassj hryk fgibson operon fisherp druvus alaninmcr dullhunk neils Bioinformatics
	Web Services at the European Bioinformatics Institute [My Copy] Nucl. Acids Res., Vol. 35, No. Web Server issue. (18 June 2007), gkm291. by Alberto Labarga, Franck Valentin, Mikael Anderson, Rodrigo Lopez posted to web_services ebi database bioinformatics by jeargle on 2009-11-09 21:35:02 as along with 12 people tomjad druvus Cortel daforerog moborg dullhunk sujaikumar sgoetz niallhaslam sim82 alanrw tny
	ENFIN – A European network for integrative systems biology [My Copy] Comptes Rendus Biologies (15 October 2009) by Pascal Kahlem, Andrew Clegg, Florian Reisinger, et al.Ioannis Xenarios, Henning Hermjakob, Christine Orengo, Ewan Birney posted to systems_biology data_integration bioinformatics by perkeo on 2009-11-09 13:31:38 as
	Web API for biology with a workflow navigation system [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W11-16. by Yeondae Kwon, Yasumasa Shigemoto, Yoshikazu Kuwana, Hideaki Sugawara posted to workflow web_services soap rest bioinformatics by pekrau on 2009-11-09 13:10:46 as along with 8 people and 1 group tprpip dswan nuin cassj druvus dullhunk guhjy daforerog Bioinformatics
	Writing DNA with GenoCAD. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W40-47. by Michael J. Czar, Yizhi Cai, Jean Peccoud posted to bioinformatics by dchughes on 2009-11-09 08:14:30 as along with 7 people JamesBarger genocad bertelsen peccoud Vincent_Rouilly grahamc GustavoLacerda
	Accelerating epistasis analysis in human genetics with consumer graphics hardware [My Copy] BMC Research Notes, Vol. 2, No. 1. (2009), 149. by Nicholas S. Armstrong, Casey Greene, Fabio Cancare, Jason Moore posted to wgsa genetics epistasis copmuting bioinformatics by slack---line on 2009-11-08 21:00:42 as
	Managing and analyzing next-generation sequence data. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000369. by Brent G. Richter, David P. Sexton posted to ht_sequencing bioinformatics 2009 by hpaces on 2009-11-08 09:38:24 as along with 36 people and 3 groups gdv GeeSharpMinor idonaldson darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec humburg Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz michaelbarton dswan reyez kshameer TRHvidsten djkt ppgardne BergmanLab Bioinformatics Journal picks
	Bioinformatics challenges of new sequencing technology [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 142-149. by M. Pop, S. Salzberg posted to review ht_sequencing bioinformatics 2008 by hpaces on 2009-11-08 09:37:37 as along with 33 people heliopais imaginatio operon daforerog n00c ptrobajo orzenil APRegier katholt michaelbarton kiekyon thegoose2 xingxu floatingpoint polivares yupu treangen jmcq delenickphd giovenko jmeppley dchughes djkt GustavoLacerda niallhaslam urgi Neeperando jfr tharris mariakmejia caseybrown yoonk druvus
	A maximum likelihood framework for protein design [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (29 June 2006), 326. by Claudia Kleinman, Nicolas Rodrigue, Cecile Bonnard, Herve Philippe, Nicolas Lartillot posted to udem stuff robert-cedergren-center phylogeny clique bioinformatics by seb1 on 2009-11-07 23:15:13 as
	BANNER: an executable survey of advances in biomedical named entity recognition. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2008), pp. 652-663. by Robert Leaman, Graciela Gonzalez posted to recognition bioinformatics automaton application by joachimbaran on 2009-11-06 17:12:26 as along with 3 people guhjy vlachmore graciela
	GATE: Software for the Analysis and Visualization of High-Dimensional Time-series Expression Data [My Copy] Bioinformatics (5 November 2009), btp628. by Ben D. MacArthur, Alexander Lachmann, Ihor R. Lemischka, Avi Ma'ayan posted to time-course proteomics gene expression bioinformatics by brianb on 2009-11-06 15:53:56 as along with 1 person ngehlenborg
	Generic eukaryotic core promoter prediction using structural features of DNA [My Copy] Genome Research, Vol. 18, No. 2. (20 February 2008), pp. 310-323. by Thomas Abeel, Yvan Saeys, Eric Bonnet, Pierre Rouze, Yves Van de Peer posted to transcription promoter genomics bioinformatics by timflutre on 2009-11-06 09:53:22 as along with 8 people chvlyl hagechouchin443 rsaito tonamswish cjeans cabbagezs maximilianh idonaldson
	SimBoolNet - A Cytoscape Plugin for Dynamic Simulation of Signaling Networks [My Copy] Bioinformatics (3 November 2009), btp617. by Jie Zheng, David Zhang, Pawel F. Przytycki, Rafal Zielinski, Jacek Capala, Teresa M. Przytycka posted to tool signaling networks cytoscape bioinformatics by renatomilani on 2009-11-06 02:02:43 as
	The UCSC Genome Browser Database: update 2009 [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D755-761. by R. M. Kuhn, D. Karolchik, A. S. Zweig, et al.T. Wang, K. E. Smith, K. R. Rosenbloom, B. Rhead, B. J. Raney, A. Pohl, M. Pheasant, L. Meyer, F. Hsu, A. S. Hinrichs, R. A. Harte, B. Giardine, P. Fujita, M. Diekhans, T. Dreszer, H. Clawson, G. P. Barber, D. Haussler, W. J. Kent posted to motifmap human genomics genome genes datasets data computational chromosome biology bioinformatics by kmdaily on 2009-11-06 00:15:39 as along with 3 people taroleo cpwardell jfr
	Next generation software for functional trend analysis [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 3043-3044. by Gabriel F. Berriz, John E. Beaver, Can Cenik, Murat Tasan, Frederick P. Roth posted to proteins networks genomics genome genes biology bioinformatics algorithms by kmdaily on 2009-11-05 23:55:45 as along with 2 people VGreiff guhjy
	Prediction of effective genome size in metagenomic samples [My Copy] Genome Biology, Vol. 8 (15 January 2007), R10. by Jeroen Raes, Jan O. Korbel, Martin J. Lercher, Christian von Mering, Peer Bork posted to metagenomics genome_size bioinformatics by halinat on 2009-11-05 15:47:12 as along with 3 people and 1 group idoerg yas michC T_lab
	An introduction to scripting in Ruby for biologists. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 221. by Jan Aerts, Andy Law posted to ruby programming bioinformatics by isimpson on 2009-11-05 09:45:21 as along with 25 people and 3 groups kshameer n00c Zephyrus nuin sobolevnrm jago lwaldron apaydin natstreet Stew silberbauer mfenner phoenixzxl renatomilani abhishek_tiwari rschulz sjcockell dullhunk druvus neils daforerog fgibson leemond31 brianb dswan Bioinformatics - CRUK Journal picks Bioinformatics
	Combinatorial patterns of histone acetylations and methylations in the human genome [My Copy] Nature Genetics, Vol. 40, No. 7. (15 June 2008), pp. 897-903. by Zhibin Wang, Chongzhi Zang, Jeffrey A. Rosenfeld, et al.Dustin E. Schones, Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Weiqun Peng, Michael Q. Zhang, Keji Zhao posted to histones histone_modifications histone_modification epigenetics data_set chip-seq cd4_t_cells bioinformatics 2008 by suizifish on 2009-11-05 04:28:35 as along with 13 people and 1 group tonamswish sebastien_vigneau gderwin oelemento raylim coela jernst bpcusack kambiz caseybrown djkt kengg inesdesantiago Epigenetics
	An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs) [My Copy] Genome Research, Vol. 18, No. 9. (24 September 2008), pp. 1518-1529. by Vardhman K. Rakyan, Thomas A. Down, Natalie P. Thorne, et al.Paul Flicek, Eugene Kulesha, Stefan GrÃ¤f, Eleni M. Tomazou, Liselotte BÃ¤ckdahl, Nathan Johnson, Marlis Herberth, Kevin L. Howe, David K. Jackson, Marcos M. Miretti, Heike Fiegler, John C. Marioni, Ewan Birney, Tim J. P. Hubbard, Nigel P. Carter, Simon TavarÃ©, Stephan Beck posted to methylome medip genome-wide epigenetics dna_methylation data_set bioinformatics 2008 by suizifish on 2009-11-05 04:19:23 as along with 8 people timhubbard abizar iris42 huiminC oelemento rschulz vega niallhaslam
	Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains [My Copy] Genome Research, Vol. 19, No. 1. (January 2009), pp. 24-32. by Suresh Cuddapah, Raja Jothi, Dustin E. Schones, Tae-Young Roh, Kairong Cui, Keji Zhao posted to tfbs tf histone data_set ctcf chip-seq bioinformatics 2009 by suizifish on 2009-11-05 03:23:54 as along with 13 people and 1 group aprickett gdb fenghezi clearbluespring rschulz xingxu sebastien_vigneau cassj caseybrown polivares inesdesantiago oelemento maximilianh CTCF
	Combinatorial binding predicts spatio-temporal cis-regulatory activity. [My Copy] Nature, Vol. 462, No. 7269. (5 November 2009), pp. 65-70. by Robert P. Zinzen, Charles Girardot, Julien Gagneur, Martina Braun, Eileen E. Furlong posted to transcription-factor-binding gene-expression expression_patterns drosophila data bioinformatics by pedrobeltrao on 2009-11-04 19:42:35 as along with 10 people emptyhb toszko roys inesdesantiago fenghezi balabu iskathy djkt megraw TRHvidsten
	Accurate determination of microbial diversity from 454 pyrosequencing data. [My Copy] Nature methods, Vol. 6, No. 9. (09 September 2009), pp. 639-641. by Christopher Quince, Anders Lanzén, Thomas P. Curtis, et al.Russell J. Davenport, Neil Hall, Ian M. Head, L. Fiona Read, William T. Sloan posted to pyrosequencing bioinformatics by halinat on 2009-11-04 18:38:07 as along with 7 people and 2 groups kinestetika jgill jonilaserson skembel druvus orzenil danmaclean iSEEM Bioinformatics
	TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 56. by Naryttza Diaz, Lutz Krause, Alexander Goesmann, Karsten Niehaus, Tim Nattkemper posted to metagenomics bioinformatics by halinat on 2009-11-04 18:35:14 as along with 5 people and 1 group esyoun dakelley jonathaneisen bluto jmeppley iSEEM
	The Sequence Analysis and Management System – SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies [My Copy] Journal of Biotechnology, Vol. 140, No. 1-2. (10 March 2009), pp. 3-12. by Thomas Bekel, Kolja Henckel, Helge Küster, et al.Folker Meyer, Virginie Mittard Runte, Heiko Neuweger, Daniel Paarmann, Oliver Rupp, Martha Zakrzewski, Alfred Pühler posted to pyrosequencing metagenomics bioinformatics by halinat on 2009-11-04 18:33:01 as along with 1 person druvus
	A dictionary to identify small molecules and drugs in free text [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2983-2991. by Kristina M. Hettne, Rob H. Stierum, Martijn J. Schuemie, et al.Peter J. M. Hendriksen, Bob J. A. Schijvenaars, Erik M. Mulligen, Jos Kleinjans, Jan A. Kors posted to chemical_names bioinformatics by AlexBateman to the group Journal picks on 2009-11-04 17:11:07 as along with 3 people anthropomorphism dullhunk ptrobajo
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted to reference bioinformatics by Yanno on 2009-11-04 14:43:40 as along with 52 people and 7 groups aaltenburger marekrud guhjy dolchan frohike operon CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom wei_tang fenghezi cisevol barry sdaehne druvus Pedro Martinez EvoDevo lab Barcelona Orengo Group Journal Picks Bioinformatics - CRUK ccsbs BergmanLab structural_bioinformatics McCammon
	An introduction to artificial neural networks in bioinformatics--application to complex microarray and mass spectrometry datasets in cancer studies [My Copy] Brief Bioinform, Vol. 10, No. 3. (1 May 2009), pp. 315-329. by Lee J. Lancashire, Christophe Lemetre, Graham R. Ball posted to pattern_classiciation neural_networks bioinformatics by giovenko on 2009-11-04 14:13:57 as along with 7 people and 1 group jfr eliasman m509396 barry brianb nuin renatomilani Bioinformatics
	CORUM: the comprehensive resource of mammalian protein complexes--2009 [My Copy] Nucl. Acids Res. (1 November 2009), gkp914. by Andreas Ruepp, Brigitte Waegele, Martin Lechner, et al.Barbara Brauner, Irmtraud Dunger-Kaltenbach, Gisela Fobo, Goar Frishman, Corinna Montrone, Mewes posted to protein_complex database bioinformatics by AlexBateman to the group Journal picks on 2009-11-04 10:35:04 as
	How to visually interpret biological data using networks [My Copy] Nature Biotechnology, Vol. 27, No. 10. (01 October 2009), pp. 921-924. by Daniele Merico, David Gfeller, Gary D. Bader posted to bioinformatics by qayub to the group Journal picks on 2009-11-04 09:18:09 as along with 11 people mhamidi OliverHarriman AJCann grahamc rdiaz megraw tmmurali fgibson gotgenes druvus dullhunk
	Circos: An information aesthetic for comparative genomics [My Copy] Genome Research, Vol. 19, No. 9. (18 September 2009), pp. 1639-1645. by Martin Krzywinski, Jacqueline Schein, Ä°nanã§ Birol, et al.Joseph Connors, Randy Gascoyne, Doug Horsman, Steven J. Jones, Marco A. Marra posted to visualization bioinformatics by jmanning2k on 2009-11-03 20:35:10 as along with 10 people and 1 group djkt rdiaz pkonings natstreet chrisamiller aprasad cisevol nuin idonaldson kshameer BergmanLab
	UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. [My Copy] Nucleic acids research (30 October 2009) by Giorgio Grillo, Antonio Turi, Flavio Licciulli, et al.Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro A. Gennarino, David S. Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole posted to untranslated_sequences regulatory_motifs bioinformatics by ppgardne to the group Journal picks on 2009-11-03 18:27:42 as along with 1 person daforerog
	Predicting new molecular targets for known drugs [My Copy] Nature, Vol. 462, No. 7270. (01 November 2009), pp. 175-181. by Michael J. Keiser, Vincent Setola, John J. Irwin, et al.Christian Laggner, Atheir I. Abbas, Sandra J. Hufeisen, Niels H. Jensen, Michael B. Kuijer, Roberto C. Matos, Thuy B. Tran, Ryan Whaley, Richard A. Glennon, Jerome Hert, Kelan L. H. Thomas, Douglas D. Edwards, Brian K. Shoichet, Bryan L. Roth posted to nature bioinformatics by seb1 on 2009-11-03 17:23:47 as along with 11 people zufar pablocarb zwang TRHvidsten phoenixzxl qshao Yanno mnishimu tmmurali sjcockell abhishek_tiwari
	CNV-seq, a new method to detect copy number variation using high-throughput sequencing. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 80. by Chao Xie, Martti T. Tammi posted to whole-genome-seq nextgen cnv bioinformatics by stubrown on 2009-11-03 16:26:43 as along with 16 people and 1 group cthachuk GustavoLacerda n00c darian bmenten natstreet sameersoi svenrahmann xiechao semrich pkonings rdiaz dswan sleepingcell neils magusina Bioinformatics
	Mapping translocation breakpoints by next-generation sequencing. [My Copy] Genome research, Vol. 18, No. 7. (7 July 2008), pp. 1143-1149. by Wei Chen, Vera Kalscheuer, Andreas Tzschach, et al.Corinna Menzel, Reinhard Ullmann, Marcel Holger H. Schulz, Fikret Erdogan, Na Li, Zofia Kijas, Ger Arkesteijn, Isidora Lopez L. Pajares, Margret Goetz-Sothmann, Uwe Heinrich, Imma Rost, Andreas Dufke, Ute Grasshoff, Birgitta Glaeser, Martin Vingron, Hilger H. Ropers posted to whole-genome-seq translocation nextgen mutations bioinformatics by stubrown on 2009-11-03 16:23:58 as along with 6 people sameersoi nuin usagi-kirin caseybrown APRegier Neeperando
	A 1q44 deletion, paternal UPD of chromosome 2 and a deletion due to a complex translocation detected in children with abnormal phenotypes using new SNP array technology. [My Copy] Cytogenetic and genome research, Vol. 124, No. 1. (2009), pp. 94-101. by B. A. Talseth-Palmer, N. A. Bowden, C. Meldrum, et al.J. Nicholl, E. Thompson, K. Friend, J. Liebelt, D. Bratkovic, E. Haan, S. Yu, R. J. Scott posted to translocation snp-chip snp mutations genotyping deletions cnv bioinformatics by stubrown on 2009-11-03 16:21:23 as
	COPA-cancer outlier profile analysis. [My Copy] Bioinformatics (7 August 2006) by James W W. Macdonald, Debashis Ghosh posted to translocation software cancer bioinformatics by stubrown on 2009-11-03 16:12:18 as along with 3 people wimufi jfr shigepong

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transcription	58
microarray	42
hematopoiesis	35
stemcell	20
cancer	18
transcription_factor	17
leukemia	15
model	14
network	14
breast	10
methylome	10
chromatin	9
differentiation	9
epigenetics	9
genome	8
dna_damage	7
mathematical	7
methylation	7
myelopoiesis	7
yeast	7
chip-chip	6
erythropoiesis	6
gata1	6
histone	6
protein	6
regulation	6
her2	5
histone_code	5
signal_transduction	5
algorithm	4
fusion	4
gene_expression	4
microrna	4
polycomb	4
promoter	4
radiation	4
simulation	4
cis_regulatory_module	3
gata2	3
granulocyte_maturation	3
human	3
module	3
mouse	3
myeloid	3
pathway	3
petrinet	3
phosphorylation	3
rad53	3
affymetrix	2
bhlh	2
biclustering	2
bioinformatics	2
carcinogenesis	2
cd34	2
cgh	2
checkpoint	2
chromosomal_abnormality	2
commitment	2
conserved	2
copy_number	2
data_mining	2
disturbance	2
diversity	2
dna	2
eklf	2
game_theory	2
granulocyte	2
hdac	2
hox	2
motif	2
myelodysplasia	2
oscillation	2
regulatory	2
survival	2
svm	2
switch	2
target	2
tiling_array	2
trithorax	2
agent	1
akt	1
aneuploidy	1
anova	1
aper	1
apoptosis	1
bibtex-import	1
chemoresistance	1
chromosomal_instability	1
c-kit	1
code	1
complex_adaptive_system	1
cpg_island	1
damage	1
database	1
dcis	1
design	1
egfr	1
embryonic	1
eml	1
enhancer	1
eosinophil	1
epistasis	1
erythroid	1
evolution	1
factorial	1
feature_selection	1
gene	1
genetic	1
genetic_algorithm	1
globin	1
homology	1
inflammation	1
interaction	1
interactome	1
intron	1
ising	1
limma	1
lineage_priming	1
lymphoma	1
machine_learning	1
mcf7	1
metapopulation	1
mitochdonria	1
mll	1
mutation	1
nb4	1
network_analysis	1
nfkb	1
notch	1
nucleosomes	1
oncodeme	1
pattern	1
potts	1
pseudoinverse	1
pwm	1
pyknon	1
qtl	1
review	1
rna	1
semantic_web	1
sequence	1
social_capital	1
statistics	1
stochastic	1
structural_hole	1
sweb	1
synthetic_biology	1
synthetic-biology	1
systems_biology	1
t-cell	1
text_mining	1
tgfbeta	1
time_series	1
transposon	1
transposon_free	1
wnt	1

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