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	Sequential Analysis for Microarray Data Based on Sensitivity and Meta-Analysis [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 8, No. 1. by Guillemette Marot, Claus-Dieter Mayer posted to seqanmetama by ugengma on 2009-02-26 12:44:56 as
	The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 9. (2008), S10. by Leming Shi, Wendell Jones, Roderick Jensen, et al.Stephen Harris, Roger Perkins, Federico Goodsaid, Lei Guo, Lisa Croner, Cecilie Boysen, Hong Fang, Feng Qian, Shashi Amur, Wenjun Bao, Catalin Barbacioru, Vincent Bertholet, Xiaoxi Cao, Tzu M. Chu, Patrick Collins, Xiao H. Fan, Felix Frueh, James Fuscoe, Xu Guo, Jing Han, Damir Herman, Huixiao Hong, Ernest Kawasaki, Quan Z. Li, Yuling Luo, Yunqing Ma, Nan Mei, Ron Peterson, Raj Puri, Richard Shippy, Zhenqiang Su, Yongming Sun, Hongmei Sun, Brett Thorn, Yaron Turpaz, Charles Wang, Sue Wang, Janet Warrington, James Willey, Jie Wu, Qian Xie, Liang Zhang, Lu Zhang, Sheng Zhong, Russell Wolfinger, Weida Tong posted to metabiocreproducibility by ugengma on 2008-12-23 13:43:04 as along with 16 people and 1 group mayercd Zephyrus daforerog oliviawi zufar bandrewfox lwaldron mdharsee shikin rdiaz jfr dswan guhjy GeeSharpMinor ptrobajo Jonesy Bioinformatics
	Distribution Theory for Glass's Estimator of Effect Size and Related Estimators [My Copy] Journal of Educational Statistics, Vol. 6, No. 2. (1981), pp. 107-128. by Larry V. Hedges posted to hedges1981 by ugengma on 2008-09-22 09:49:25 as
	A structural mixed model for variances in differential gene expression studies. [My Copy] Genetical research, Vol. 89, No. 1. (February 2007), pp. 19-25. by F. Jaffrézic, G. Marot, S. Degrelle, I. Hue, J. L. Foulley posted to smvar by ugengma on 2008-08-28 14:06:09 as
	Combining dependent P-values [My Copy] Statistics & Probability Letters, Vol. 60, No. 2. (15 November 2002), pp. 183-190. by James T. Kost, Michael P. Mcdermott posted to metapval2002 by ugengma on 2007-12-14 13:40:55 as
	A systematic comparison of methods for combining p-values from independent tests [My Copy] Computational Statistics & Data Analysis, Vol. 47, No. 3. (1 October 2004), pp. 467-485. by Thomas M. Loughin posted to metaloughin by ugengma on 2007-12-12 10:56:21 as
	Significance analysis of time course microarray experiments [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 36. (6 September 2005), pp. 12837-12842. by John D. Storey, Wenzhong Xiao, Jeffrey T. Leek, Ronald G. Tompkins, Ronald W. Davis posted to storeytc by ugengma on 2007-10-12 15:37:20 as along with 6 people arne roys greg egreenfest jo_davies Montrachet
	Shrinkage estimators for covariance matrices. [My Copy] Biometrics, Vol. 57, No. 4. (December 2001), pp. 1173-1184. by M. J. Daniels, R. E. Kass posted to danielskasscov by ugengma on 2007-10-12 15:09:15 as
	Significance analysis of microarrays applied to the ionizing radiation response [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 9. (24 April 2001), pp. 5116-5121. by Virginia G. Tusher, Robert Tibshirani, Gilbert Chu posted to sam by ugengma on 2007-10-12 15:07:43 as along with 19 people jperkins ipark-kaist bertelsen daforerog marboe roys ihpark bassene frohike paszkows miguel jen_drake gpalidwor olympos ccr incovoma shikin askrajiv renatomilani
	Comparing the continuous representation of time-series expression profiles to identify differentially expressed genes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 18. (2 September 2003), pp. 10146-10151. by Ziv Bar-Joseph, Georg Gerber, Itamar Simon, David K. Gifford, Tommi S. Jaakkola posted to tcbarjoseph by ugengma on 2007-10-11 12:23:08 as along with 1 person roys
	Statistical significance analysis of longitudinal gene expression data. [My Copy] Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1628-1635. by X. Guo, H. Qi, C. M. Verfaillie, W. Pan posted to tcguo by ugengma on 2007-10-11 10:09:09 as
	Statistical tests for identifying differentially expressed genes in time-course microarray experiments. [My Copy] Bioinformatics, Vol. 19, No. 6. (12 April 2003), pp. 694-703. by T. Park, S. G. Yi, S. Lee, et al.S. Y. Lee, D. H. Yoo, J. I. Ahn, Y. S. Lee posted to tcpark by ugengma on 2007-10-11 10:07:03 as along with 1 person textoris
	maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments [My Copy] Bioinformatics, Vol. 22, No. 9. (1 May 2006), pp. 1096-1102. by Ana Conesa, Maria J. Nueda, Manuel Talon posted to masigpro by ugengma on 2007-10-11 10:00:00 as along with 3 people YukaH sgoetz talponer
	Translational repression by RNA-binding protein TIAR. [My Copy] Mol Cell Biol, Vol. 26, No. 7. (April 2006), pp. 2716-2727. by K. Mazan-Mamczarz, A. Lal, J. L. Martindale, T. Kawai, M. Gorospe posted to gse1440 by ugengma on 2007-10-03 12:11:23 as
	When should one subtract background fluorescence in two color microarrays? [My Copy] Biostatistics (12 December 2006) by Robert B B. Scharpf, Christine A A. Iacobuzio-Donahue, Julie B B. Sneddon, Giovanni Parmigiani posted to background by ugengma on 2007-09-25 11:57:42 as along with 3 people jfr rdiaz shigepong
	Conditional Rejection Probabilities of Student's <I>t</I>-test and Design Adaptations [My Copy] Biometrical Journal, Vol. 46, No. 4. (2004), pp. 389-403. by Martin Posch, Nina Timmesfeld, Franz König, Hans-Helge Müller posted to condrrejectprobattest by ugengma on 2007-08-29 09:44:10 as
	Semiparametric Estimation of a Two-component Mixture Model where One Component is known [My Copy] Scandinavian Journal of Statistics, Vol. 33, No. 4. (December 2006), pp. 733-752. by Laurent Bordes, Celine Delmas, Pierre Vandekerkhove posted to semiparambordesduval by ugengma on 2007-08-28 14:24:47 as
	Discovering gene expression patterns in Time Course Microarray Experiments by ANOVA-SCA. [My Copy] Bioinformatics (22 May 2007) by María José J. Nueda, Ana Conesa, Johan A A. Westerhuis, et al.Huub C J C. Hoefsloot, Age K K. Smilde, Manuel Talón, Alberto Ferrer posted to anovascatimecourse by ugengma on 2007-08-08 12:55:45 as along with 4 people rvosa shigepong ghattem sgoetz
	GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. [My Copy] Bioinformatics (12 May 2007) by Sean Davis, Paul S S. Meltzer posted to geoquery by ugengma on 2007-08-08 12:53:05 as along with 10 people and 1 group brianb dswan neils shikin guhjy jfr giovenko ablejec zhouyu bertelsen Bioinformatics
	Interim analyses with repeated measurements in a sequential clinical trial [My Copy] Biometrika, Vol. 77, No. 2. (1 June 1990), pp. 359-364. by L. J. Wei, John Q. Su, John M. Lachin posted to repeatedmeasuresseqan by ugengma on 2007-07-19 14:51:00 as
	Sample size determination in microarray experiments for class comparison and prognostic classification [My Copy] Biostatistics, Vol. 6, No. 1., 27. by Kevin Dobbin, Richard Simon posted to samplesizeclassifcparpredict by ugengma on 2007-07-19 14:48:20 as along with 5 people and 1 group rdiaz dswan frohike cberry aviad_work Bioinformatics
	A global test for groups of genes: testing association with a clinical outcome. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 1. (1 January 2004), pp. 93-99. by Jelle J. Goeman, Sara A. van de Geer, Floor de Kort, Hans C. van Houwelingen posted to goemantest by ugengma on 2007-07-19 14:34:54 as along with 7 people and 1 group ptrobajo holecm frohike dragonrez ealloza saman_vp klo BioinfoCIPF
	Sample size calculation for multiple testing in microarray data analysis [My Copy] Biostatistics, Vol. 6, No. 1., 157. by Sin-Ho Jung posted to samplesizemulttest by ugengma on 2007-07-19 14:21:29 as
	Sample size planning for developing classifiers using high-dimensional DNA microarray data [My Copy] Biostatistics, Vol. 8, No. 1. (January 2007), pp. 101-117. by Dobbin, K. Kevin, Simon, M. Richard posted to samplesizeclassif by ugengma on 2007-07-19 14:19:00 as along with 2 people rdiaz Natowicz
	Microarray expression profiling identifies genes with altered expression in HDL-deficient mice. [My Copy] Genome Res, Vol. 10, No. 12. (December 2000), pp. 2022-2029. by M. J. Callow, S. Dudoit, E. L. Gong, T. P. Speed, E. M. Rubin posted to apoai by ugengma on 2007-07-09 15:48:23 as along with 1 person mcristinaconti
	Linear models and empirical bayes methods for assessing differential expression in microarray experiments. [My Copy] Statistical applications in genetics and molecular biology, Vol. 3, No. 1. (2004) by Gordon K. Smyth posted to no-tag by ugengma on 2007-07-09 12:28:33 as along with 19 people and 1 group schwalb shikin bertelsen jperkins zoex_99 ipark-kaist lwaldron paszkows isimpson Stew ihpark giovenko RMGraze maryee mayercd justescaped heliopais guhjy talponer Bioinformatics - CRUK
	Power and sample size for clinical trials when efficacy is required in multiple endpoints: application to an Alzheimer's treatment trial. [My Copy] Clin Trials, Vol. 2, No. 5. (2005), pp. 387-393. by C. Xiong, K. Yu, F. Gao, Y. Yan, Z. Zhang posted to endpointsxiong by ugengma on 2007-07-09 10:06:57 as
	Group sequential testing in clinical trials with multivariate observations: a review. [My Copy] Stat Med, Vol. 13, No. 2. (30 January 1994), pp. 101-111. by J. W. Lee posted to lee94 by ugengma on 2007-07-09 10:04:43 as
	VarMixt: efficient variance modelling for the differential analysis of replicated gene expression data [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 502-508. by Paul Delmar, Stephane Robin, Jean J. Daudin posted to varmixt2005 by ugengma on 2007-07-09 09:36:56 as
	A simple method for assessing sample sizes in microarray experiments. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by R. Tibshirani posted to samplesizetibshirani by ugengma on 2007-06-28 17:26:10 as along with 4 people and 1 group frohike jen_drake gpalidwor bertelsen Bioinformatics
	An Overview of Statistical Approaches for Adaptive Designs and Design Modifications [My Copy] Biometrical Journal, Vol. 48, No. 4. (2006), pp. 507-520. by Helmut Schäfer, Nina Timmesfeld, Hans-Helge Müller posted to overviewschaefer by ugengma on 2007-06-14 11:35:48 as
	Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. [My Copy] Science (New York, N.Y.), Vol. 286, No. 5439. (15 October 1999), pp. 531-537. by T. R. Golub, D. K. Slonim, P. Tamayo, et al.C. Huard, M. Gaasenbeek, J. P. Mesirov, H. Coller, M. L. Loh, J. R. Downing, M. A. Caligiuri, C. D. Bloomfield, E. S. Lander posted to golub by ugengma on 2007-06-13 18:35:54 as along with 20 people and 2 groups isimpson srp33 ipark-kaist kentz esyoun stharward gstiglic ctaraujo ihpark winterschlaefer hhhhssss balajis sdvillal archroad giovanni santhosh jo_davies akastrin zchen raiyar Network Analysis of Genes Regulated in Renal Diseases GeschwindLab
	False discovery rate, sensitivity and sample size for microarray studies [My Copy] Bioinformatics, Vol. 21, No. 13. (1 July 2005), pp. 3017-3024. by Yudi Pawitan, Stefan Michiels, Serge Koscielny, Arief Gusnanto, Alexander Ploner posted to fdrsenspawitan by ugengma on 2007-06-06 16:58:09 as along with 6 people zoex_99 jperkins bertelsen guhjy shikin wirawan
	Combining multiple microarray studies and modeling interstudy variation. [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by J. K. Choi, U. Yu, S. Kim, O. J. Yoo posted to metachoi by ugengma on 2007-06-01 09:01:59 as along with 2 people shikin daforerog
	Combining adaptive designs with control of the false discovery rate--a generalized definition for a global p-value. [My Copy] Biom J, Vol. 49, No. 1. (February 2007), pp. 94-106. by A. Victor, G. Hommel posted to largeendpointsglobphommel by ugengma on 2007-05-31 18:39:56 as
	Fisher's combined p-value for detecting differentially expressed genes using Affymetrix expression arrays [My Copy] BMC Genomics, Vol. 8 (09 April 2007), 96. by Ann M. Hess, Hari K. Iyer posted to combinpvalhess by ugengma on 2007-05-31 18:25:23 as along with 1 person jfr
	Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 25. (22 June 2004), pp. 9309-9314. by Daniel R. Rhodes, Jianjun Yu, K. Shanker, et al.Nandan Deshpande, Radhika Varambally, Debashis Ghosh, Terrence Barrette, Akhilesh Pandey, Arul M. Chinnaiyan posted to metapvalrhodes2004 by ugengma on 2007-05-30 19:47:33 as along with 4 people and 1 group daforerog frohike hawkeyehammer srp33 Indigene
	Meta-analysis of microarrays: interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer. [My Copy] Cancer research, Vol. 62, No. 15. (1 August 2002), pp. 4427-4433. by Daniel R. Rhodes, Terrence R. Barrette, Mark A. Rubin, Debashis Ghosh, Arul M. Chinnaiyan posted to metapvalrhodes by ugengma on 2007-05-30 19:38:47 as along with 7 people and 1 group daforerog shikin floatingpoint hawkeyehammer waghsk srp33 kengg Indigene
	Comparative Microarray Analysis [My Copy] OMICS: A Journal of Integrative Biology, Vol. 10, No. 3. (September 2006), pp. 381-397. by Ola Larsson, Kristian Wennmalm, Rickard Sandberg posted to metalarsson by ugengma on 2007-05-29 18:43:19 as along with 2 people tjtaylor jfr
	Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing [My Copy] Journal of the Royal Statistical Society, Vol. 57, No. 1. (1995), pp. 289-300. by Yoav Benjamini, Yosef Hochberg posted to bh by ugengma on 2007-05-29 18:15:48 as along with 39 people and 4 groups arider1 ctacmo abrentnall jperkins CulCog jlorent zufar bertelsen Zephyrus fisherp michaelbarton dakelley lwaldron polivares brianb ucbcjbm jfr xingxu emptyhb renewang Yanno sdvillal druvus natstreet czeller guhjy RMGraze oannes vplagnol frohike grahamc shigepong ccr axelon amsantos rschulz dragonrez isimpson vertikalist Biostatistics Bioinformatics Regulomics_UCHSC BTS-PT-AS-CS
	A mixture model approach for the analysis of microarray gene expression data [My Copy] Computational Statistics & Data Analysis, Vol. 39, No. 1. (28 March 2002), pp. 1-20. by David B. Allison, Gary L. Gadbury, Moonseong Heo, et al.Jose R. Fernandez, Cheol-Koo Lee, Tomas A. Prolla, Richard Weindruch posted to allisonbeta by ugengma on 2007-05-29 17:53:51 as
	Adaptive Sample Size Calculations in Group Sequential Trials [My Copy] Biometrics, Vol. 55, No. 4. (1999), pp. 1286-1290. by Walter Lehmacher, Gernot Wassmer posted to lehmacherwassmer by ugengma on 2007-05-29 17:18:00 as
	A simple implementation of a normal mixture approach to differential gene expression in multiclass microarrays. [My Copy] Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1608-1615. by G. J. McLachlan, R. W. Bean, L. B. Jones posted to mclachlannormmixt by ugengma on 2007-05-29 16:39:18 as
	The PowerAtlas: a power and sample size atlas for microarray experimental design and research [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006) by Grier Page, Jode Edwards, Gary Gadbury, et al.Prashanth Yelisetti, Jelai Wang, Prinal Trivedi, David Allison posted to poweratlas by ugengma on 2007-05-29 16:23:26 as along with 4 people dswan frohike natstreet guhjy
	Estimating the proportion of true null hypotheses, with application to DNA microarray data [My Copy] Journal of the Royal Statistical Society: Series B (Statistical Methodology), Vol. 67, No. 4. (September 2005), pp. 555-572. by Mette Langaas, Bo H. Lindqvist, Egil Ferkingstad posted to propnullhyplangaas by ugengma on 2007-05-29 14:53:21 as
	Inference on Multiple Endpoints in Clinical Trials with Adaptive Interim Analyses [My Copy] Biometrical Journal, Vol. 41, No. 3. (1999), pp. 261-277. by Meinhard Kieser, Peter Bauer, Walter Lehmacher posted to multendpointskieser by ugengma on 2007-05-29 12:34:44 as
	Design of Group Sequential Clinical Trials with Multiple Endpoints [My Copy] Journal of the American Statistical Association, Vol. 84, No. 407. (1989), pp. 776-779. by Dei-In Tang, Clare Gnecco, Nancy L. Geller posted to multendpointstang by ugengma on 2007-05-29 12:27:33 as
	An overview of group sequential methods in longitudinal clinical trials. [My Copy] Stat Methods Med Res, Vol. 9, No. 5. (October 2000), pp. 497-515. by B. Spiessens, E. Lesaffre, G. Verbeke, K. Kim, D. L. DeMets posted to overviewspiessens by ugengma on 2007-05-29 12:04:33 as along with 2 people romaina schulman
	A 25-year review of sequential methodology in clinical studies [My Copy] Statistics in Medicine, Vol. 26, No. 2. (2007), pp. 237-252. by Susan Todd posted to overviewtodd by ugengma on 2007-05-29 11:50:29 as along with 1 person guhjy
	Sequential methods and group sequential designs for comparative clinical trials. [My Copy] Fundam Clin Pharmacol, Vol. 17, No. 5. (October 2003), pp. 505-516. by V. Sébille, E. Bellissant posted to overviewbellissant by ugengma on 2007-05-29 11:48:47 as

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