ujh's library 76 articles Export

	Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes. [My Copy] Genome Res (12 December 2005) by Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, et al.Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-Ichi I. Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano posted to alternative pap promoter splicing by ujh on 2005-12-23 09:43:19 as along with 7 people textoris troels_marstrand olympos nosada17 antonkratz bethsabrina yoanjacquemin
	A bipartite sequence element associated with matrix/scaffold attachment regions. [My Copy] Nucleic Acids Res, Vol. 27, No. 14. (15 July 1999), pp. 2924-2930. by C. M. van Drunen, R. G. Sewalt, R. W. Oosterling, P. J. Weisbeek, S. C. Smeekens, R. van Driel posted to mar smar by ujh on 2005-12-12 12:10:15 as
	In silico prediction of scaffold/matrix attachment regions in large genomic sequences. [My Copy] Genome Res, Vol. 12, No. 2. (February 2002), pp. 349-354. by M. Frisch, K. Frech, A. Klingenhoff, K. Cartharius, I. Liebich, T. Werner posted to mar smar by ujh on 2005-12-08 18:08:16 as along with 1 person textoris
	Large-scale identification and mapping of nuclear matrix-attachment regions in the distal imprinted domain of mouse chromosome 7. [My Copy] DNA Res, Vol. 11, No. 6. (31 December 2004), pp. 391-407. by W. Purbowasito, C. Suda, T. Yokomine, et al.M. Zubair, T. Sado, K. Tsutsui, H. Sasaki posted to mar mouse smar by ujh on 2005-12-06 08:44:59 as
	Mining sequence annotation databanks for association patterns. [My Copy] Bioinformatics, Vol. 21, No. Suppl_3. (1 November 2005) by Irena I I. Artamonova, Goar Frishman, Mikhail S S. Gelfand, Dmitrij Frishman posted to association data learning machine mining rule by ujh on 2005-11-26 12:04:43 as
	Genome-wide in silico mapping of scaffold/matrix attachment regions in Arabidopsis suggests correlation of intragenic scaffold/matrix attachment regions with gene expression. [My Copy] Plant Physiol, Vol. 135, No. 2. (June 2004), pp. 715-722. by S. Rudd, M. Frisch, K. Grote, B. C. Meyers, K. Mayer, T. Werner posted to attachement mar matrix region by ujh on 2005-11-21 14:21:06 as along with 1 person textoris
	A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions. [My Copy] Trends Genet, Vol. 19, No. 3. (March 2003), pp. 119-124. by G. V. Glazko, E. V. Koonin, I. B. Rogozin, S. A. Shabalina posted to attachement mar matrix region by ujh on 2005-11-21 14:20:38 as along with 1 person textoris
	Stable high-level transgene expression in Arabidopsis thaliana using gene silencing mutants and matrix attachment regions. [My Copy] Plant J, Vol. 39, No. 3. (August 2004), pp. 440-449. by K. M. Butaye, I. J. Goderis, P. F. Wouters, et al.J. M. Pues, S. L. Delauré, W. F. Broekaert, A. Depicker, B. P. Cammue, M. F. De Bolle posted to attachement mar matrix region by ujh on 2005-11-21 14:20:15 as
	Characterization of randomly-obtained matrix attachment regions (MARs) from higher plants. [My Copy] Biochemistry, Vol. 38, No. 39. (28 September 1999), pp. 12795-12804. by S. M. Michalowski, G. C. Allen, G. E. Hall, W. F. Thompson, S. Spiker posted to attachement mar matrix region by ujh on 2005-11-21 14:19:50 as
	Scaffold/matrix-attached regions: topological switches with multiple regulatory functions. [My Copy] Crit Rev Eukaryot Gene Expr, Vol. 6, No. 2-3. (1996), pp. 115-138. by J. Bode, M. Stengert-Iber, V. Kay, T. Schlake, A. Dietz-Pfeilstetter posted to attachement mar matrix region by ujh on 2005-11-21 14:19:22 as
	Use of matrix attachment regions (MARs) to minimize transgene silencing. [My Copy] Plant Mol Biol, Vol. 43, No. 2-3. (June 2000), pp. 361-376. by G. C. Allen, S. Spiker, W. F. Thompson posted to attachement mar matrix region by ujh on 2005-11-21 14:01:06 as along with 1 person textoris
	A computational investigation of kinetoplastid trans-splicing. [My Copy] Genome Biol, Vol. 6, No. 11. (2005) by S. Gopal, S. Awadalla, T. Gaasterland, G. A. Cross posted to splicing trans-splicing by ujh on 2005-11-11 20:41:27 as
	Predicting non-coding RNA genes in Escherichia coli with boosted genetic programming. [My Copy] Nucleic Acids Res, Vol. 33, No. 10. (2005), pp. 3263-3270. by P. Saetrom, R. Sneve, K. I. Kristiansen, et al.O. Snøve, T. Grünfeld, T. Rognes, E. Seeberg posted to genes genetic non-coding programming rna by ujh on 2005-06-25 13:03:58 as along with 2 people and 2 groups numata bsmagic Bioinformatics bioinplant
	A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction. [My Copy] Current opinion in structural biology, Vol. 15, No. 3. (3 June 2005), pp. 285-289. by John Moult posted to prediction structure by ujh on 2005-06-11 11:51:12 as along with 12 people and 2 groups timhubbard flbarroso mcbla nigham thaliana warlock6x3 marcius ffranca j3xucite dgront granujilla mingzhi BioinfoCIPF SGU-CIPF
	Machine Learning (Mcgraw-Hill International Edit) [My Copy] (01 October 1997) by Thomas Mitchell posted to data learning machine mining by ujh on 2005-06-03 17:00:34 as along with 15 people and 3 groups ansteltucson robert85 pprett sb-3000 ryanshaw sdvillal gatsoulis Mohan-S wkiri aklassen singhsh jliegl quianominorleo akastrin creswick sims_phd_cohort_2005 digital_youth Medical Image Analysis and Visualization @ OSU
	Remote homology detection: a motif based approach. [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by A. Ben-Hur, D. Brutlag posted to data learning machine mining by ujh on 2005-05-29 15:06:10 as along with 2 people and 1 group Cortel okarsligil Bioinformatics
	Strong-association-rule mining for large-scale gene-expression data analysis: a case study on human SAGE data. [My Copy] Genome Biol, Vol. 3, No. 12. (2002) by C. Becquet, S. Blachon, B. Jeudy, J. F. Boulicaut, O. Gandrillon posted to association data learning machine mining rule by ujh on 2005-05-29 15:05:31 as along with 1 person srp33
	Filtering erroneous protein annotation. [My Copy] Bioinformatics, Vol. 20 Suppl 1 (4 August 2004) by D. Wieser, E. Kretschmann, R. Apweiler posted to data filtering learning machine mining by ujh on 2005-05-29 15:04:33 as
	Using Bayesian networks to analyze expression data [My Copy] In RECOMB '00: Proceedings of the fourth annual international conference on Computational molecular biology (2000), pp. 127-135. by Nir Friedman, Michal Linial, Iftach Nachman, Dana Pe'er posted to bayesian data learning machine mining by ujh on 2005-05-29 15:03:21 as along with 2 people abhik wnpx
	Multi-class protein fold recognition using support vector machines and neural networks. [My Copy] Bioinformatics (Oxford, England), Vol. 17, No. 4. (April 2001), pp. 349-358. by C. H. Ding, I. Dubchak posted to data learning machine mining network neural svm by ujh on 2005-05-29 15:01:44 as along with 3 people barmak7282 chad_davis craigtalbert
	Boosting for tumor classification with gene expression data [My Copy] Bioinformatics, Vol. 19, No. 9. (12 June 2003), pp. 1061-1069. by Marcel Dettling, Peter Buhlmann posted to data learning machine mining by ujh on 2005-05-29 14:59:45 as along with 2 people askom longhai
	Comparisons and validation of statistical clustering techniques for microarray gene expression data [My Copy] Bioinformatics, Vol. 19, No. 4. (1 March 2003), pp. 459-466. by Susmita Datta, Somnath Datta posted to data learning machine microarray mining by ujh on 2005-05-29 14:58:30 as along with 7 people socwangnan Yanno textoris tvdbulck bertelsen echsberde dps
	Mining gene expression databases for association rules. [My Copy] Bioinformatics, Vol. 19, No. 1. (January 2003), pp. 79-86. by C. Creighton, S. Hanash posted to data learning machine mining by ujh on 2005-05-29 14:57:37 as
	CLICK and EXPANDER: a system for clustering and visualizing gene expression data. [My Copy] Bioinformatics, Vol. 19, No. 14. (22 September 2003), pp. 1787-1799. by Roded Sharan, Adi Maron-Katz, Ron Shamir posted to clustering data learning machine mining visualization by ujh on 2005-05-29 14:56:41 as along with 3 people meanerelk maralena minostro
	Decision tree-based formation of consensus protein secondary structure prediction. [My Copy] Bioinformatics, Vol. 15, No. 12. (December 1999), pp. 1039-1046. by J. Selbig, T. Mevissen, T. Lengauer posted to data learning machine mining by ujh on 2005-05-29 14:55:39 as along with 1 person kaarsinogen
	Predicting subcellular localization of proteins using machine-learned classifiers. [My Copy] Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 547-556. by Z. Lu, D. Szafron, R. Greiner, et al.P. Lu, D. S. Wishart, B. Poulin, J. Anvik, C. Macdonell, R. Eisner posted to data learning machine mining by ujh on 2005-05-29 14:54:28 as along with 1 person Cortel
	Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns. [My Copy] Bioinformatics, Vol. 18, No. 5. (May 2002), pp. 725-734. by J. Li, L. Wong posted to data learning machine mining by ujh on 2005-05-29 14:53:39 as along with 1 person flavio48
	A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression. [My Copy] Bioinformatics, Vol. 20, No. 15. (12 October 2004), pp. 2429-2437. by T. Li, C. Zhang, M. Ogihara posted to data learning machine mining by ujh on 2005-05-29 14:52:06 as along with 3 people prerna chiahuey srp33
	Protein beta-turn prediction using nearest-neighbor method. [My Copy] Bioinformatics, Vol. 20, No. 1. (1 January 2004), pp. 40-44. by S. Kim posted to data learning machine mining by ujh on 2005-05-29 14:50:37 as along with 1 person kallberg
	Gene Selection for Cancer Classification using Support Vector Machines [My Copy] Machine Learning, Vol. 46, No. 1-3. (2002), pp. 389-422. by Isabelle Guyon, Jason Weston, Stephen Barnhill, Vladimir Vapnik posted to data learning machine mining svm by ujh on 2005-05-29 14:49:46 as along with 5 people barmak7282 gyuli chad_davis archroad jianrong
	Comparison of statistical methods for classification of ovarian cancer using mass spectrometry data [My Copy] Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1636-1643. by Baolin Wu, Tom Abbott, David Fishman, et al.Walter McMurray, Gil Mor, Kathryn Stone, David Ward, Kenneth Williams, Hongyu Zhao posted to data learning machine mining by ujh on 2005-05-29 14:47:15 as along with 2 people olberd lp2
	In silico protein recombination: enhancing template and sequence alignment selection for comparative protein modelling. [My Copy] J Mol Biol, Vol. 328, No. 3. (2 May 2003), pp. 593-608. by B. Contreras-Moreira, P. W. Fitzjohn, P. A. Bates posted to algorithm bioinformatics comparative fold genetic modeling recognition selection template by ujh on 2005-05-21 15:01:12 as along with 1 person j3xucite
	Novel use of a genetic algorithm for protein structure prediction: searching template and sequence alignment space. [My Copy] Proteins, Vol. 53 Suppl 6 (2003), pp. 424-429. by B. Contreras-Moreira, P. W. Fitzjohn, M. Offman, G. R. Smith, P. A. Bates posted to algorithm bioinformatics comparative fold genetic modeling recognition selection template by ujh on 2005-05-21 15:00:33 as
	Ultraconserved elements in insect genomes: A highly conserved intronic sequence implicated in the control of homothorax mRNA splicing [My Copy] Genome Research, Vol. 15, No. 6. (17 June 2005), pp. 800-808. by Evgeny A. Glazov, Michael Pheasant, Elizabeth A. McGraw, Gill Bejerano, John S. Mattick posted to bioinformatics clustering dna insect non-coding by ujh on 2005-05-20 18:56:11 as along with 3 people and 1 group sujaikumar operon Stew EisenLab
	Unix Power Tools, Third Edition [My Copy] (01 October 2002) by Shelley Powers, Tim O'Reilly, Mike Loukides posted to unix by ujh on 2005-05-15 12:38:15 as along with 1 person reisender
	The Pragmatic Programmer: From Journeyman to Master [My Copy] (30 October 1999) by Andrew Hunt, David Thomas posted to pragmatic by ujh on 2005-05-15 12:37:35 as along with 16 people emerson gakincho jodal ansobol turker creswick MRRHead lfk BarrosH fheintz aku8000 fsteeg mmeteo germoglio GuAlex erisu
	Pragmatic Version Control Using CVS [My Copy] (30 September 2003) by Dave Thomas, Andy Hunt posted to cvs pragmatic vc by ujh on 2005-05-15 12:36:56 as along with 3 people reisender 1101 pilho
	Pragmatic Unit Testing in Java with JUnit [My Copy] (30 September 2003) by Andy Hunt, Dave Thomas posted to java pragmatic testing by ujh on 2005-05-15 12:35:45 as
	Pragmatic Project Automation: How to Build, Deploy, and Monitor Java Apps [My Copy] (03 August 2004) by Mike Clark posted to automation pragmatic by ujh on 2005-05-15 12:35:16 as
	lex & yacc, 2nd Edition (A Nutshell Handbook) [My Copy] (02 October 1992) by John Levine, Tony Mason, Doug Brown posted to compiler lex yacc by ujh on 2005-05-15 12:34:23 as along with 1 person dullhunk
	Programming Ruby: The Pragmatic Programmers' Guide, Second Edition [My Copy] (01 October 2004) by Dave Thomas, Chad Fowler, Andy Hunt posted to ruby by ujh on 2005-05-15 12:33:49 as along with 8 people pdlug stagediver elliotb reisender 1101 pool007 jonathlela DaveWebster
	Python Programming Patterns [My Copy] (23 October 2001) by Thomas W. Christopher posted to python by ujh on 2005-05-15 12:31:50 as along with 1 person reisender
	Programming Perl (3rd Edition) [My Copy] (01 July 2000) by Larry Wall, Tom Christiansen, Jon Orwant posted to perl by ujh on 2005-05-15 12:31:06 as along with 1 person and 1 group cmm FAB-lab
	The Ruby Way [My Copy] (17 December 2001) by Hal Fulton posted to ruby by ujh on 2005-05-15 12:30:12 as along with 3 people reisender pool007 neuralwarp
	Algorithm Design: Foundations, Analysis, and Internet Examples [My Copy] (15 September 2001) by Michael T. Goodrich, Roberto Tamassia, Michael Goodrich posted to algorithm cs design by ujh on 2005-05-09 17:36:16 as
	Inferring Cellular Networks Using Probabilistic Graphical Models [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 799-805. by Nir Friedman posted to cellular networks by ujh on 2005-05-04 17:50:55 as along with 24 people and 2 groups antonkratz jxl phoenixzxl abhishek_tiwari richardbickerton ruichu ggallone bertelsen ldfu lfriedl opheliav ryang wnpx nirfriedman neveaire koller helsley dimatura edwardmorrissey vietanh0 Yumyai srp33 saman_vp jo_davies Jarman Lab kdl
	Detection of functional modules from protein interaction networks [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 54, No. 1. (1 January 2004), pp. 49-57. by Jose B. Pereira-Leal, Anton J. Enright, Christos A. Ouzounis posted to functional modules by ujh on 2005-05-04 17:49:55 as along with 4 people saket carlk opheliav wnpx
	Protein complexes and functional modules in molecular networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 21. (14 October 2003), pp. 12123-12128. by Victor Spirin, Leonid A. Mirny posted to functional modules by ujh on 2005-05-04 17:49:28 as along with 15 people and 4 groups lawraga ycho0610 diamantis jiny camster kentsis tmmurali dragonrez karfunkel joseph_x_zhou Evangelia grahamc biehl ellakat carlk dbk-lab biophysics HIV_DR bioNetwork_sysBio
	Genome evolution reveals biochemical networks and functional modules. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 26. (23 December 2003), pp. 15428-15433. by C. von Mering, E. M. Zdobnov, S. Tsoka, et al.F. D. Ciccarelli, J. B. Pereira-Leal, C. A. Ouzounis, P. Bork posted to functional modules by ujh on 2005-04-25 13:13:14 as along with 1 person and 2 groups lfriedl kdl Bioinformatics
	The identification of functional modules from the genomic association of genes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 9. (30 April 2002), pp. 5890-5895. by Berend Snel, Peer Bork, Martijn A. Huynen posted to functional modules by ujh on 2005-04-25 13:12:34 as along with 3 people ichbins81 karfunkel renatomilani

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ujh's library 76 articles Export

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