CiteULike: vavi's loops [3 articles]

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protein	35
contact_map	16
structure_prediction	15
prediction	14
loop	9
loop_modeling	8
review	7
ab_initio	6
loop_prediction	6
fragments	5
structure	5
structure_comparison	4
simulated_annealing	4
molecular_dynamics	4
strutcture_prediction	4
docking	4
database	3
contact_maps	3
structure_alignment	3
monte_carlo	3
sequence_alignment	3
comparative_modeling	3
loops	3
library	2
energy	2
protein_structure	2
strucure_prediction	2
bioinformatics	2
contact_map_prediction	2
substitution	2
sequence	2
matrix	2
programming	2
server	2
classification	2
similarity	2
structure_similarity	2
contact_map_similarity	2
scoring	1
overlap	1
main-chain	1
knowledge_based	1
drug-companies	1
protein_similarity	1
argumentation	1
substitution_matrix	1
image_processing	1
angles	1
robotics	1
normal-mode-analysis	1
flexdock	1
machine_learning	1
svm	1
protein_structure_prediction	1
closeness	1
side-chain	1
survey	1
contact_map_overlap	1
visualization	1
all-atom	1
loop_analysis	1
amino	1
ranking	1
context	1
acid	1
kinematics	1
contact_matrix	1
hybrid	1
expert_knowledge	1
search	1
baker	1
eigenvector	1
pdb	1
boston	1
supersecondary_library	1
flexibility	1
structural_genomics	1
function	1
packing	1
contact_maps_use	1
residue_property	1
volume	1
rosetta	1
google	1
motivation	1
engine	1
algorithm	1
modeling	1
fiser	1
inverse_kinematics	1

	A supersecondary structure library and search algorithm for modeling loops in protein structures [My Copy] Nucleic Acids Research, Vol. 34, No. 7. (14 April 2006), pp. 2085-2097. by Narcis Fernandez-Fuentes, Baldomero Oliva, Andras Fiser posted to loops supersecondary_library by vavi on 2006-04-25 15:25:28 as along with 2 people and 1 group carlosjavierna Einat structural_bioinformatics
	Structural similarity of loops in protein families: toward the understanding of protein evolution. [My Copy] BMC Evol Biol, Vol. 5, No. 1. (3 February 2005) by A. R. Panchenko, T. Madej posted to loops similarity structure by vavi on 2005-08-24 13:50:56 as along with 1 person and 1 group Einat structural_bioinformatics
	Efficient methods for filtering and ranking fragments for the prediction of structurally variable regions in proteins [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 54, No. 3. (19 December 2003), pp. 583-595. by Philipp Heuser, Gerd Wohlfahrt, Dietmar Schomburg posted to loops prediction structure by vavi on 2005-07-25 17:09:52 as

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