CiteULike: vlachmore's Tsujii:J [10 articles]

Modeling Latent-Dynamic in Shallow Parsing: A Latent Conditional Model with Imrpoved Inference

In Proceedings of the 22nd International Conference on Computational Linguistics (Coling 2008) (August 2008), pp. 841-848.

by Xu Sun, Louis P. Morency, Daisuke Okanohara, Yoshimasa Tsuruoka, Jun'ichi Tsujii

posted to chunking conditional dynamic latent model parsing shallow by vlachmore on 2009-06-25 19:03:59 as

Sequential Labeling with Latent Variables: An Exact Inference Algorithm and its Efficient Approximation

In Proceedings of the 12th Conference of the European Chapter of the ACL (EACL 2009) (March 2009), pp. 772-780.

by Xu Sun, Jun'ichi Tsujii

posted to conditional fields latent random variables by vlachmore on 2009-06-25 18:27:23 as

GENIA-GR: a Grammatical Relation Corpus for Parser Evaluation in the Biomedical Domain

In LREC 2008 Proceedings (2008)

by Yuka Tateisi, Yusuke Miyao, Kenji Sagae, Jun’ichi Tsujii

posted to bionlp evaluation grammatical parsing relations by vlachmore on 2009-04-08 01:26:45 as

Task-oriented Evaluation of Syntactic Parsers and Their Representations

In Proceedings of ACL-08: HLT (June 2008), pp. 46-54.

by Yusuke Miyao, Rune S\aetre, Kenji Sagae, Takuya Matsuzaki, Jun'ichi Tsujii

posted to bionlp evaluation interaction parsing protein-protein by vlachmore on 2009-04-08 01:17:24 as

along with 3 people and 1 group henk-cul JeremyKahn satre dbmi-nlp

Event extraction from biomedical papers using a full parser.

Pac Symp Biocomput (2001), pp. 408-419.

by A. Yakushiji, Y. Tateisi, Y. Miyao, J. Tsujii

posted to bionlp event extraction by vlachmore on 2009-01-23 13:14:07 as

along with 3 people and 2 groups henk-cul helliontroy yggdrasil dbmi-nlp biomedical-nlp

Corpus annotation for mining biomedical events from literature

BMC Bioinformatics, Vol. 9, No. 1. (2008), 10.

by Jin D. Kim, Tomoko Ohta, Jun'ichi Tsujii

posted to annotation bionlp corpus event by vlachmore on 2008-01-08 20:31:52 as

along with 15 people and 2 groups satre kekeeo arafalov Cluster guhjy yas dullhunk bhaddow sobolevnrm gmonce wchapman mircea henk-cul gilesc aliekens baker-group dbmi-nlp

Learning string similarity measures for gene/protein name dictionary look-up using logistic regression.

Bioinformatics (12 August 2007)

by Yoshimasa Tsuruoka, John McNaught, Jun'ichi Tsujii, Sophia Ananiadou

posted to bionlp gene name normalization by vlachmore on 2007-10-31 13:28:12 as

along with 5 people schwartzjmc guhjy dullhunk bhaddow satre

GENIA corpus - a semantically annotated corpus for bio-textmining

In Bioinformatics, Vol. 19, Suppl. 1 (2003), pp. 180-182.

by J. D. Kim, T. Ohta, Y. Tateisi, J. Tsujii

posted to bionlp corpora entity named recognition by vlachmore on 2007-10-04 18:47:01 as

Accomplishments and challenges in literature data mining for biology.

Bioinformatics, Vol. 18, No. 12. (December 2002), pp. 1553-1561.

by L. Hirschman, J. C. Park, J. Tsujii, L. Wong, C. H. Wu

posted to bionlp entity named recognition by vlachmore on 2007-10-04 18:30:58 as

along with 7 people and 6 groups irenas Enro yas benny kehan caporaso satre dbk-lab biodiversity_conservation Bioinformatics T_lab biomedical-nlp GrassBase

Extracting the names of genes and gene products with a hidden Markov model

In Proceedings of the 18th conference on Computational linguistics (2000), pp. 201-207.

by Nigel Collier, Chikashi Nobata, Jun-Ichi Tsujii

posted to entity gene hmm named recognition by vlachmore on 2007-10-04 18:09:49 as

	Modeling Latent-Dynamic in Shallow Parsing: A Latent Conditional Model with Imrpoved Inference [My Copy] In Proceedings of the 22nd International Conference on Computational Linguistics (Coling 2008) (August 2008), pp. 841-848. by Xu Sun, Louis P. Morency, Daisuke Okanohara, Yoshimasa Tsuruoka, Jun'ichi Tsujii posted to chunking conditional dynamic latent model parsing shallow by vlachmore on 2009-06-25 19:03:59 as
	Sequential Labeling with Latent Variables: An Exact Inference Algorithm and its Efficient Approximation [My Copy] In Proceedings of the 12th Conference of the European Chapter of the ACL (EACL 2009) (March 2009), pp. 772-780. by Xu Sun, Jun'ichi Tsujii posted to conditional fields latent random variables by vlachmore on 2009-06-25 18:27:23 as
	GENIA-GR: a Grammatical Relation Corpus for Parser Evaluation in the Biomedical Domain [My Copy] In LREC 2008 Proceedings (2008) by Yuka Tateisi, Yusuke Miyao, Kenji Sagae, Jun’ichi Tsujii posted to bionlp evaluation grammatical parsing relations by vlachmore on 2009-04-08 01:26:45 as
	Task-oriented Evaluation of Syntactic Parsers and Their Representations [My Copy] In Proceedings of ACL-08: HLT (June 2008), pp. 46-54. by Yusuke Miyao, Rune S\aetre, Kenji Sagae, Takuya Matsuzaki, Jun'ichi Tsujii posted to bionlp evaluation interaction parsing protein-protein by vlachmore on 2009-04-08 01:17:24 as along with 3 people and 1 group henk-cul JeremyKahn satre dbmi-nlp
	Event extraction from biomedical papers using a full parser. [My Copy] Pac Symp Biocomput (2001), pp. 408-419. by A. Yakushiji, Y. Tateisi, Y. Miyao, J. Tsujii posted to bionlp event extraction by vlachmore on 2009-01-23 13:14:07 as along with 3 people and 2 groups henk-cul helliontroy yggdrasil dbmi-nlp biomedical-nlp
	Corpus annotation for mining biomedical events from literature [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 10. by Jin D. Kim, Tomoko Ohta, Jun'ichi Tsujii posted to annotation bionlp corpus event by vlachmore on 2008-01-08 20:31:52 as along with 15 people and 2 groups satre kekeeo arafalov Cluster guhjy yas dullhunk bhaddow sobolevnrm gmonce wchapman mircea henk-cul gilesc aliekens baker-group dbmi-nlp
	Learning string similarity measures for gene/protein name dictionary look-up using logistic regression. [My Copy] Bioinformatics (12 August 2007) by Yoshimasa Tsuruoka, John McNaught, Jun'ichi Tsujii, Sophia Ananiadou posted to bionlp gene name normalization by vlachmore on 2007-10-31 13:28:12 as along with 5 people schwartzjmc guhjy dullhunk bhaddow satre
	GENIA corpus - a semantically annotated corpus for bio-textmining [My Copy] In Bioinformatics, Vol. 19, Suppl. 1 (2003), pp. 180-182. by J. D. Kim, T. Ohta, Y. Tateisi, J. Tsujii posted to bionlp corpora entity named recognition by vlachmore on 2007-10-04 18:47:01 as
	Accomplishments and challenges in literature data mining for biology. [My Copy] Bioinformatics, Vol. 18, No. 12. (December 2002), pp. 1553-1561. by L. Hirschman, J. C. Park, J. Tsujii, L. Wong, C. H. Wu posted to bionlp entity named recognition by vlachmore on 2007-10-04 18:30:58 as along with 7 people and 6 groups irenas Enro yas benny kehan caporaso satre dbk-lab biodiversity_conservation Bioinformatics T_lab biomedical-nlp GrassBase
	Extracting the names of genes and gene products with a hidden Markov model [My Copy] In Proceedings of the 18th conference on Computational linguistics (2000), pp. 201-207. by Nigel Collier, Chikashi Nobata, Jun-Ichi Tsujii posted to entity gene hmm named recognition by vlachmore on 2007-10-04 18:09:49 as

vlachmore's Tsujii:J [10 articles] Export

vlachmore's tags

learning	87
bionlp	86
clustering	63
entity	47
active	46
recognition	45
named	45
process	39
active_learning	37
dirichlet	33
bayesian	31
vector	31
ner	30
classification	30
support	29
machines	28
text	27
parsing	25
random	24
sampling	24
semantic	23
fields	22
unsupervised	22
conditional	22
semi-supervised	21
models	20
extraction	19
dimensionality	19
reduction	19
gene	17
gaussian	17
model	17
non-parametric	16
svm	15
evaluation	15
machine	14
software	14
mixture	14
selection	13
resolution	13
information	12
hierarchical	12
analysis	11
normalization	11
crf	11
markov	11
categorization	10
bootstrapping	10
feature	10
relation	10
inference	10
coreference	9
tutorial	9
non-negative	9
svms	9
anaphora	9
role	9
verb	9
gibbs	8
labelling	8
spectral	8
word	8
relational	8
shared	8
variable	8
kernel	8
kernels	8
graph	8
component	8
corpora	8
factorization	8
matrix	8
probabilistic	8
task	8
syntactic	8
disambiguation	7
semantics	7
detection	7
sense	7
subcategorization	7
latent	7
based	7
indian	7
buffet	7
tagging	7
interaction	7
topic	7
pca	7
carlo	6
domain	6
protein-protein	6
monte	6
adaptation	6
modelling	6
distributional	6
uncertainty	6
part-of-speech	6
hmm	6
principal	6
agreement	5
dependency	5
shallow	5
document	5
language	5
boosting	5
annotation	5
stopping	5
context	5
generative	5
chunking	5
maximum	5
similarity	5
estimation	5
reinforcement	5
retrieval	5
criterion	5
induction	5
inter-annotator	5
tree	5
variational	5
chain	5
regression	4
cost	4
name	4
error	4
metrics	4
structural	4
constraints	4
entropy	4
allocation	4
multiclass	4
event	4
parallel	4
processes	4
infinite	4
spectral_clustering	4
hpsg	4
speech	4
logistic	4
space	4
rasp	4
ranking	4
wordnet	4
frame	4
divergence	4
graph_kernel	3
entailment	3
web	3
discriminative	3
sparse	3
noise	3
smoothing	3
bottleneck	3
expectation-maximization	3
kl-divergence	3
bayes	3
query	3
ccg	3
variational_inference	3
constrained_clustering	3
seed	3
grammar	3
multinomial	3
poisson	3
yor	3
walks	3
noun	3
guidelines	3
lexicon	3
biocreative	3
network	3
textual	3
filters	3
cooccurrence	3
sequence	3
methods	3
nominalizations	3
pitman	3
frames	3
correspondence	3
grammatical	3
split-merge	3
distribution	3
combination	2
unlabelled	2
k-means	2
naive	2
generalized	2
pomdps	2
expectation	2
hedge	2
curation	2
prepositional	2
heat	2
paraphrasing	2
speculative	2
labels	2
flybase	2
linguistic	2
networks	2
parse	2
conway	2
biomedical	2
priors	2
ibp	2
term	2
multinomials	2
ace	2
pagerank	2
confidence	2
coalescent	2
counts	2
training	2
ontology	2
laten	2
metric	2
rules	2
perceptron	2
relatedness	2
dynamic	2
agglomerative	2
phrase	2
statistical	2
supervised	2
logic	2
protein	2
spam	2
class	2
attachment	2
by	2
bilingual	2
compound	2
classifier	2
committee	2
feedback	2
maxwell	2
hidden	2
paraphrase	2
lda	2
distance	2
pos	2
lexical	2
transformation-based	2
exponential	2
acquisition	2
dependencies	2
comparison	2
sentiment	2
interpretation	2
mcmc	2
relations	2
discrete	2
co-training	2
social	1
comlex	1
binomial	1
loopy	1
relationships	1
graph-based	1
kingman	1
gibs	1
xml	1
switching	1
zone	1
theory	1
statistics	1
scixml	1
adaboost	1
multi-task	1
single-link	1
english	1
ppi	1
matching	1
boundary	1
scope	1
aso	1
polysemy	1
segmentation	1
parameter	1
verbs	1
ncbi	1
prototype-driven	1
church	1
cluster	1
variable-length	1
gamma	1
categorical	1
algorithms	1
dissimilarity	1
generation	1
lop	1
overlap	1
views	1
supertagging	1
polysemous	1
time	1
string	1
corpus	1
summarize	1
concept_discovery	1
iobew	1
gradient	1
self-training	1
labeling	1
hashing	1
modal	1
iob	1
genia	1
scheme	1
compositional	1
likelihood	1
max	1
hybrid	1
amibguity	1
stick-breaking	1
people	1
maximization	1
bregman	1
propaagation	1
em	1
softtfidf	1
mallet	1
partial	1
output	1
proper	1
harmonic	1
hellinger	1
average	1
conformal	1
underspecification	1
uneven	1
alternations	1
multilingual	1
logarithmic	1
combinatorial	1
instance	1
filtering	1
rcv1	1
scoring	1
contrastive	1
message-passing	1
programming	1
collapsed	1
evolution	1
lingpipe	1
correlated	1
information_gain	1
knn	1
sketch	1
argument	1
dictionaries	1
qbc	1
distributed	1
pool	1
postnominal	1
lexico-semantic	1
user	1
map_reduce	1
question	1
ensemble	1
search	1
weighting	1
phylogenetic	1
contraints	1
ambiguity	1
human	1
conjugacy	1
measure	1
wsd	1
reuters	1
lsi	1
identifier	1
kalman	1
nearest	1
kullback	1
identification	1
variables	1
algorithm	1
blocked	1
series	1
answering	1
frequency	1
structure	1
prediction	1
summarization	1
selective	1
data	1
soft	1
bell	1
predicate	1
bloom	1
ecoc	1
unigrams	1
b-cubed	1
neighbors	1
belief	1
experiments	1
point	1
mining	1
concept	1
muticlass	1
citation	1
transductive	1
correcting	1
convergence	1
even	1
margins	1
crfs	1
reusability	1
mira	1
index	1
geneways	1
probability	1
membership	1
skip-chain	1
multiple	1
indexing	1
slice	1
mutual_information	1
timed	1
datasets	1
co-testing	1
large	1
bioinformatics	1
information_extraction_technology	1
flyslip	1
translation	1
autoclass	1
functions	1
positive	1
parser	1
change	1
maps	1
leibler	1
mutliple	1
opinion	1
cobweb	1
bigrams	1
particle	1
author	1
kdd	1
self-organizing	1
v-measure	1
german	1
transfer	1
pcfg	1
entrez	1
bloomier	1
inverse	1
query_by_committee	1
nlp	1
graphical	1
gene_ontology	1
prior	1
laplacian	1
metropolis	1
eigenvalues	1
decision	1
on-line	1
margin	1
codes	1
bag-of-concepts	1
performance	1
complete-link	1
hierarchy	1
boom	1
fisher	1
conll	1
string_kernel	1
field	1
rand	1
semi-markov	1