vplagnol's Todd:JA [26 articles] Export

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	Genome-wide analysis of allelic expression imbalance in human primary cells by high throughput transcriptome resequencing [My Copy] Human Molecular Genetics, No. In press. by Graham A. Heap, Jennie H. M. Yang, Kate Downes, et al.Barry C. Healy, Karen A. Hunt, Nicholas Bockett, Lude Franke, Patrick C. Dubois, Charles A. Mein, Richard J. Dobson, Thomas J. Albert, Matthew J. Rodesch, David G. Clayton, John A. Todd, David A. van Heel, Vincent Plagnol posted to ase by vplagnol on 2009-10-01 20:13:30 as
	Rare Variants of IFIH1, a Gene Implicated in Antiviral Responses, Protect Against Type 1 Diabetes [My Copy] Science, Vol. 324, No. 5925. (17 April 2009), pp. 387-389. by Sergey Nejentsev, Neil Walker, David Riches, Michael Egholm, John A. Todd posted to ifih1 association by vplagnol on 2009-09-23 18:34:44 as along with 8 people and 2 groups liqbbi n00c jandot APRegier myzhang pkonings absterga jbhiatt Journal picks Marcotte_Lab
	Cell-specific protein phenotypes for the autoimmune locus IL2RA using a genotype-selectable human bioresource [My Copy] Nature Genetics, Vol. 41, No. 9. (23 August 2009), pp. 1011-1015. by Calliope A. Dendrou, Vincent Plagnol, Erik Fung, et al.Jennie H. M. Yang, Kate Downes, Jason D. Cooper, Sarah Nutland, Gillian Coleman, Matthew Himsworth, Matthew Hardy, Oliver Burren, Barry Healy, Neil M. Walker, Kerstin Koch, Willem H. Ouwehand, John R. Bradley, Nicholas J. Wareham, John A. Todd, Linda S. Wicker posted to il2ra by vplagnol on 2009-08-24 10:06:28 as along with 3 people and 1 group gbloeb xingxu qayub Journal picks
	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes [My Copy] Nat Genet, Vol. 41, No. 6. (10 June 2009), pp. 703-707. by Jeffrey C. Barrett, David G. Clayton, Patrick Concannon, et al.Beena Akolkar, Jason D. Cooper, Henry A. Erlich, Cécile Julier, Grant Morahan, Jørn Nerup, Concepcion Nierras, Vincent Plagnol, Flemming Pociot, Helen Schuilenburg, Deborah J. Smyth, Helen Stevens, John A. Todd, Neil M. Walker, Stephen S. Rich posted to association t1d by vplagnol on 2009-05-12 14:45:50 as along with 2 people chriswallace PabloMarin
	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci [My Copy] Nature Genetics, Vol. 40, No. 12. (02 November 2008), pp. 1399-1401. by Jason D. Cooper, Deborah J. Smyth, Adam M. Smiles, et al.Vincent Plagnol, Neil M. Walker, James E. Allen, Kate Downes, Jeffrey C. Barrett, Barry C. Healy, Josyf C. Mychaleckyj, James H. Warram, John A. Todd posted to association gwas t1d by vplagnol on 2009-04-26 08:34:41 as
	Shared and Distinct Genetic Variants in Type 1 Diabetes and Celiac Disease [My Copy] New England Journal of Medicine, Vol. 359 (10 December 2008), pp. 2837-2838. by Deborah J. Smyth, Vincent Plagnol, Neil M. Walker, et al.Jason D. Cooper, Kate Downes, Jennie H. Yang, Joanna M. Howson, Helen Stevens, Ross Mcmanus, Cisca Wijmenga, Graham A. Heap, Patrick C. Dubois, David G. Clayton, Karen A. Hunt, David A. van Heel, John A. Todd posted to association celiac t1d by vplagnol on 2009-03-16 17:22:40 as along with 5 people and 4 groups jbhiatt booker HEIRS jdbowes ccots HEIRS Inflammatory Bowel Disease, Colititis, and IBS HEIRS Genetics HEIRS - Environmental Illness Research HEIRS Diabetes, Insulin Resistance and Metabolic Syndrome Research
	Extreme Clonality in Lymphoblastoid Cell Lines with Implications for Allele Specific Expression Analyses [My Copy] PLoS ONE, Vol. 3, No. 8. (13 August 2008), e2966. by Vincent Plagnol, Elif Uz, Chris Wallace, et al.Helen Stevens, David Clayton, Tayfun Ozcelik, John A. Todd posted to eqtls geneexpression lcls by vplagnol on 2009-03-16 16:13:59 as along with 1 person lp2
	Commonality in the genetic control of Type 1 diabetes in humans and NOD mice: variants of genes in the IL-2 pathway are associated with autoimmune diabetes in both species. [My Copy] Biochemical Society transactions, Vol. 36, No. Pt 3. (June 2008), pp. 312-315. by D. B. Rainbow, L. Esposito, S. K. Howlett, et al.K. M. Hunter, J. A. Todd, L. B. Peterson, L. S. Wicker posted to ase il2 by vplagnol on 2009-02-07 16:56:34 as
	Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project. [My Copy] Immunogenetics, Vol. 60, No. 1. (January 2008), pp. 1-18. by R. Horton, R. Gibson, P. Coggill, et al.M. Miretti, R. J. Allcock, J. Almeida, S. Forbes, J. G. Gilbert, K. Halls, J. L. Harrow, E. Hart, K. Howe, D. K. Jackson, S. Palmer, A. N. Roberts, S. Sims, C. A. Stewart, J. A. Traherne, S. Trevanion, L. Wilming, J. Rogers, P. J. de Jong, J. F. Elliott, S. Sawcer, J. A. Todd, J. Trowsdale, S. Beck posted to hla by vplagnol on 2009-01-05 10:43:26 as
	Localization of type 1 diabetes susceptibility to the MHC class I genes HLA-B and HLA-A [My Copy] Nature (14 November 2007) by Sergey Nejentsev, Joanna M. M. Howson, Neil M. Walker, et al.Jeffrey Szeszko, Sarah F. Field, Helen E. Stevens, Pamela Reynolds, Matthew Hardy, Erna King, Jennifer Masters, John Hulme, Lisa M. Maier, Deborah Smyth, Rebecca Bailey, Jason D. Cooper, Gloria Ribas, Duncan R. Campbell, David G. Clayton, John A. Todd posted to hla t1d by vplagnol on 2009-01-05 10:32:55 as
	Statistical independence of the colocalized association signals for type 1 diabetes and RPS26 gene expression on chromosome 12q13. [My Copy] Biostatistics (Oxford, England) (27 November 2008) by Vincent Plagnol, Deborah J J. Smyth, John A A. Todd, David G G. Clayton posted to association geneexpression rps26 t1d by vplagnol on 2008-12-01 08:35:58 as
	CD226 Gly307Ser association with multiple autoimmune diseases [My Copy] Genes and Immunity, Vol. aop, No. current. (2008) by J. P. Hafler, L. M. Maier, J. D. Cooper, et al.V. Plagnol, A. Hinks, M. J. Simmonds, H. E. Stevens, N. M. Walker, B. Healy, J. M. M. Howson, M. Maisuria, S. Duley, G. Coleman, S. C. L. Gough, J. Worthington, V. K. Kuchroo, L. S. Wicker, J. A. Todd posted to cd226 ms t1d by vplagnol on 2008-11-04 15:58:44 as along with 1 person jdbowes
	RA/T1D paper [My Copy] Genes and Immunity (2008) by Erik Fung, Deborah Smyth, John A. Todd posted to association autoimmunity ra t1d by vplagnol on 2008-10-24 10:42:56 as
	Clustering of autoimmune disease in parents of siblings from the Type 1 diabetes Warren repository. [My Copy] Diabetic medicine : a journal of the British Diabetic Association, Vol. 21, No. 4. (April 2004), pp. 358-362. by K. F. Tait, T. Marshall, J. Berman, et al.J. Carr-Smith, B. Rowe, J. A. Todd, S. C. Bain, A. H. Barnett, S. C. Gough posted to autoantibody t1d by vplagnol on 2008-09-18 09:09:03 as
	PTPN22 Trp620 explains the association of chromosome 1p13 with type 1 diabetes and shows a statistical interaction with HLA class II genotypes. [My Copy] Diabetes, Vol. 57, No. 6. (June 2008), pp. 1730-1737. by D. J. Smyth, J. D. Cooper, J. M. Howson, et al.N. M. Walker, V. Plagnol, H. Stevens, D. G. Clayton, J. A. Todd posted to association hla ptpn22 by vplagnol on 2008-06-03 07:14:19 as
	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes. [My Copy] Nature Genetics, Vol. 39 (6 June 2007), pp. 857-864. by John A. Todd, Neil M. Walker, Jason D. Cooper, et al.Deborah J. Smyth, Kate Downes, Vincent Plagnol, Rebecca Bailey, Sergey Nejentsev, Sarah F. Field, Felicity Payne, Christopher E. Lowe, Jeffrey S. Szeszko, Jason P. Hafler, Lauren Zeitels, Jennie H. M. Yang, Adrian Vella, Sarah Nutland, Helen E. Stevens, Helen Schuilenburg, Gillian Coleman, Meeta Maisuria, William Meadows, Luc J. Smink, Barry Healy, Oliver S. Burren, Alex A. C. Lam, Nigel R. Ovington, James Allen, Ellen Adlem, Hin-Tak T. Leung, Chris Wallace, Joanna M. M. Howson, Cristian Guja, Constantin Ionescu-Tîrgovişte, Matthew J. Simmonds, Joanne M. Heward, Stephen C. L. Gough, David B. Dunger, Linda S. Wicker, David G. Clayton posted to no-tag by vplagnol on 2007-12-12 13:59:37 as along with 4 people qmwwallace massivemayhem cjeans caseybrown
	Interactions between Idd5.1/Ctla4 and Other Type 1 Diabetes Genes. [My Copy] J Immunol, Vol. 179, No. 12. (15 December 2007), pp. 8341-8349. by K. Hunter, D. Rainbow, V. Plagnol, J. A. Todd, L. B. Peterson, L. S. Wicker posted to mouse t1d by vplagnol on 2007-12-12 08:45:03 as
	A method to address differential bias in genotyping in large-scale association studies. [My Copy] PLoS Genet, Vol. 3, No. 5. (18 May 2007) by V. Plagnol, J. D. Cooper, J. A. Todd, D. G. Clayton posted to genotyping by vplagnol on 2007-12-11 23:08:35 as along with 1 person guhjy
	Large-scale genetic fine mapping and genotype-phenotype associations implicate polymorphism in the IL2RA region in type 1 diabetes [My Copy] Nature Genetics, Vol. 39, No. 9. (05 August 2007), pp. 1074-1082. by Christopher E. Lowe, Jason D. Cooper, Todd Brusko, et al.Neil M. Walker, Deborah J. Smyth, Rebecca Bailey, Kirsi Bourget, Vincent Plagnol, Sarah Field, Mark Atkinson, David G. Clayton, Linda S. Wicker, John A. Todd posted to association il2ra t1d by vplagnol on 2007-12-11 22:53:39 as
	Genotype effects and epistasis in type 1 diabetes and HLA-DQ trans dimer associations with disease. [My Copy] Genes Immun, Vol. 5, No. 5. (August 2004), pp. 381-388. by B. P. Koeleman, B. A. Lie, D. E. Undlien, et al.F. Dudbridge, E. Thorsby, R. R. de Vries, F. Cucca, B. O. Roep, M. J. Giphart, J. A. Todd posted to hla by vplagnol on 2007-06-28 15:01:35 as
	Remapping the Insulin Gene/IDDM2 Locus in Type 1 Diabetes [My Copy] Diabetes, Vol. 53, No. 7. (1 July 2004), pp. 1884-1889. by Bryan J. Barratt, Felicity Payne, Chris E. Lowe, et al.Robert Hermann, Barry C. Healy, Denise Harold, Patrick Concannon, Neda Gharani, Mark I. Mccarthy, Mark G. Olavesen, Rose Mccormack, Cristian Guja, Constantin Ionescu-Tirgoviste, Dag E. Undlien, Kjersti S. Ronningen, Kathleen M. Gillespie, Eva Tuomilehto-Wolf, Jaakko Tuomilehto, Simon T. Bennett, David G. Clayton, Heather J. Cordell, John A. Todd posted to association insulin t1d by vplagnol on 2007-01-11 17:49:39 as
	Association of the T-cell regulatory gene CTLA4 with susceptibility to autoimmune disease. [My Copy] Nature, Vol. 423, No. 6939. (29 May 2003), pp. 506-511. by H. Ueda, J. M. Howson, L. Esposito, et al.J. Heward, H. Snook, G. Chamberlain, D. B. Rainbow, K. M. Hunter, A. N. Smith, G. Di Genova, M. H. Herr, I. Dahlman, F. Payne, D. Smyth, C. Lowe, R. C. Twells, S. Howlett, B. Healy, S. Nutland, H. E. Rance, V. Everett, L. J. Smink, A. C. Lam, H. J. Cordell, N. M. Walker, C. Bordin, J. Hulme, C. Motzo, F. Cucca, J. F. Hess, M. L. Metzker, J. Rogers, S. Gregory, A. Allahabadia, R. Nithiyananthan, E. Tuomilehto-Wolf, J. Tuomilehto, P. Bingley, K. M. Gillespie, D. E. Undlien, K. S. Rønningen, C. Guja, C. Ionescu-Tîrgovişte, D. A. Savage, A. P. Maxwell, D. J. Carson, C. C. Patterson, J. A. Franklyn, D. G. Clayton, L. B. Peterson, L. S. Wicker, J. A. Todd, S. C. Gough posted to association ctla4 t1d by vplagnol on 2006-12-03 18:46:37 as
	GENOME-WIDE ASSOCIATION STUDIES: THEORETICAL AND PRACTICAL CONCERNS [My Copy] Nat Rev Genet, Vol. 6, No. 2. (February 2005), pp. 109-118. by William Y. Wang, Bryan J. Barratt, David G. Clayton, John A. Todd posted to association by vplagnol on 2006-11-27 14:31:20 as along with 3 people debasis ekostem koller
	Detecting Disease Associations due to Linkage Disequilibrium Using Haplotype Tags: A Class of Tests and the Determinants of Statistical Power [My Copy] Human Heredity, Vol. 56 (2003), pp. 18-31. by J. M. Chapman, J. D. Cooper, J. A. Todd, D. G. Clayton posted to association epidemiology by vplagnol on 2006-11-24 09:55:28 as along with 1 person wijson
	A genome-wide association study of nonsynonymous SNPs identifies a type 1 diabetes locus in the interferon-induced helicase (IFIH1) region [My Copy] Nature Genetics, Vol. 38, No. 6. (14 May 2006), pp. 617-619. by Deborah J. Smyth, Jason D. Cooper, Rebecca Bailey, et al.Sarah Field, Oliver Burren, Luc J. Smink, Cristian Guja, Constantin Ionescu-Tirgoviste, Barry Widmer, David B. Dunger, David A. Savage, Neil M. Walker, David G. Clayton, John A. Todd posted to association t1d by vplagnol on 2006-10-23 16:25:25 as along with 2 people pcahan1 joepickrell
	Population structure, differential bias and genomic control in a large-scale, case-control association study [My Copy] Nature Genetics, Vol. 37, No. 11. (09 October 2005), pp. 1243-1246. by David G. Clayton, Neil M. Walker, Deborah J. Smyth, et al.Rebecca Pask, Jason D. Cooper, Lisa M. Maier, Luc J. Smink, Alex C. Lam, Nigel R. Ovington, Helen E. Stevens, Sarah Nutland, Joanna M. M. Howson, Malek Faham, Martin Moorhead, Hywel B. Jones, Matthew Falkowski, Paul Hardenbol, Thomas D. Willis, John A. Todd posted to cnvbook clustering association by vplagnol on 2006-10-03 13:48:27 as along with 1 person ccots

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association	64
t1d	39
geneexpression	38
cnv	29
autoantibody	27
statistics	22
facs	18
x-chromosome-inactivation	14
ase	12
bacteria	11
facscalibration	11
ucl	10
popgen	10
cnvbook	10
ld	9
autoimmunity	9
hla	9
clustering	8
statgen_mphil	8
ibd	8
genotyping	8
rnaseq	8
wtcccplus_paper	7
gut	7
sle	6
bcells	6
mass_spectrometry	6
il2ra	6
gwas	5
ms	5
ptpn22	5
alzheimer	5
linkage	5
ra	5
ifih1	5
graves	4
biomarker	4
ctla4	4
facsnormpaper	4
schizophrenia	4
dasl	4
epidemiology	3
ia2	3
arabidopsis	3
autophagy	3
pca_antibodies	3
pernicious_anemia	3
celiac	3
ips	3
parkinson	3
fcgr3b	3
bayes	3
nod2	3
vitamind	3
cd6	3
psoriasis	2
neurological_disease	2
hts	2
nod	2
t2d	2
treg	2
nrxn1	2
rps26	2
fcgr	2
hypertension	2
methylation	2
tpo	2
tau_gene	2
il2	2
normalisation	2
cd	2
abo	2
fcrl3	2
hgp	2
genomics	2
iga	2
mcp1	2
imputation	2
ccl2	2
neanderthal	2
ccr2	2
asthma	2
structure	2
icam	1
affymetrix	1
autism	1
mr	1
capture	1
immunity	1
cd11b	1
mrp814	1
cad	1
variability	1
chromosome17	1
eqtls	1
review	1
il10	1
ccr5	1
lupus	1
gad	1
inversion	1
eqtl	1
glm	1
brain	1
blc2	1
apoe	1
rma	1
em	1
addison	1
microarray	1
ad	1
scoretest	1
lungcancer	1
wtccc	1
trios	1
cd20	1
als	1
gene_expression	1
mouse	1
mcmc	1
stat4	1
indels	1
disc1	1
sequencing	1
bd	1
gender_bias	1
cd226	1
ins	1
fdr	1
addiction	1
insulin	1
cd86	1
cancer	1
tuberculosis	1
duchenne	1
il7r	1
nanostring	1
elisa	1
mmc	1
ccl3l1	1
lcls	1
epigenetics	1
chd	1
chipseq	1
luminex	1

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