vplagnol's cnv [29 articles] Export

Recent papers added to vplagnol's library classified by the tag cnv. You can also see everyone's cnv.

	The role of DNA copy number variation in schizophrenia. [My Copy] Biological psychiatry, Vol. 66, No. 11. (1 December 2009), pp. 1005-1012. by Gloria W. Tam, Richard Redon, Nigel P. Carter, Seth G. Grant posted to schizophrenia cnv by vplagnol on 2009-11-12 18:00:36 as along with 2 people Leaflet daforerog
	Origins and functional impact of copy number variation in the human genome [My Copy] Nature, Vol. advance online publication (07 October 2009) by Donald F. Conrad, Dalila Pinto, Richard Redon, et al.Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T. Daniel Andrews, Chris Barnes, Peter Campbell, Tomas Fitzgerald, Min Hu, Chun H. Ihm, Kati Kristiansson, Daniel G. MacArthur, Jeffrey R. MacDonald, Ifejinelo Onyiah, Andy W. Pang, Sam Robson, Kathy Stirrups, Armand Valsesia, Klaudia Walter, John Wei, Chris Tyler-Smith, Nigel P. Carter, Charles Lee, Stephen W. Scherer, Matthew E. Hurles posted to cnv by vplagnol on 2009-11-12 17:07:05 as along with 20 people and 1 group Zephyrus gthorisson biovils psique chvlyl daed daforerog zufar jessopher DrRichardBadge operon colinveal frohike sf11 sameersoi polivares dswan qayub bpcusack rdiaz Journal picks
	Microduplications of 16p11.2 are associated with schizophrenia [My Copy] Nature Genetics, Vol. 41, No. 11. (25 October 2009), pp. 1223-1227. by Shane E. McCarthy, Vladimir Makarov, George Kirov, et al.Anjene M. Addington, Jon McClellan, Seungtai Yoon, Diana O. Perkins, Diane E. Dickel, Mary Kusenda, Olga Krastoshevsky, Verena Krause, Ravinesh A. Kumar, Detelina Grozeva, Dheeraj Malhotra, Tom Walsh, Elaine H. Zackai, Paige Kaplan, Jaya Ganesh, Ian D. Krantz, Nancy B. Spinner, Patricia Roccanova, Abhishek Bhandari, Kevin Pavon, B. Lakshmi, Anthony Leotta, Jude Kendall, Yoon-ha Lee, Vladimir Vacic, Sydney Gary, Lilia M. Iakoucheva, Timothy J. Crow, Susan L. Christian, Jeffrey A. Lieberman, T. Scott Stroup, Terho Lehtimaki, Kaija Puura, Chad Haldeman-Englert, Justin Pearl, Meredith Goodell, Virginia L. Willour, Pamela DeRosse, Jo Steele, Layla Kassem, Jessica Wolff, Nisha Chitkara, Francis J. McMahon, Anil K. Malhotra, James B. Potash, Thomas G. Schulze, Markus M. Nothen, Sven Cichon, Marcella Rietschel, Ellen Leibenluft, Vlad Kustanovich, Clara M. Lajonchere, James S. Sutcliffe, David Skuse, Michael Gill, Louise Gallagher, Nancy R. Mendell, Nick Craddock, Michael J. Owen, Michael C. O'Donovan, Tamim H. Shaikh, Ezra Susser, Lynn E. DeLisi, Patrick F. Sullivan, Curtis K. Deutsch, Judith Rapoport, Deborah L. Levy, Mary-Claire King, Jonathan Sebat posted to schizophrenia cnv association by vplagnol on 2009-10-27 11:48:46 as along with 2 people dchughes daforerog
	Complex disease association studies [My Copy] No. In press. by Vincent Plagnol, David Clayton edited by E. Zeggini posted to cnv by vplagnol on 2009-10-01 20:56:46 as
	Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (02 October 2008), 409. by Johan Staaf, Johan Vallon-Christersson, David Lindgren, et al.Gunnar Juliusson, Richard Rosenquist, Mattias Höglund, Ake Borg, Markus Ringnér posted to normalisation cnvbook cnv by vplagnol on 2009-08-28 11:51:30 as along with 1 person shikin
	Accounting for uncertainty when assessing association between copy number and disease: a latent class model. [My Copy] BMC bioinformatics, Vol. 10 (06 June 2009), 172. by Juan R. González, Isaac Subirana, Geòrgia Escaramís, et al.Solymar Peraza, Alejandro Cáceres, Xavier Estivill, Lluís Armengol posted to cnvbook cnv association by vplagnol on 2009-08-27 22:43:46 as along with 2 people sameersoi rdiaz
	Methods and strategies for analyzing copy number variation using DNA microarrays. [My Copy] Nature genetics, Vol. 39, No. 7 Suppl. (July 2007) by Nigel P. Carter posted to cnv association by vplagnol on 2009-08-18 08:34:24 as along with 5 people and 1 group jo_davies guhjy jfr mrkrause rdiaz Bioinformatics
	Targeted capture and massively parallel sequencing of 12 human exomes [My Copy] Nature, Vol. 461, No. 7261. (16 August 2009), pp. 272-276. by Sarah B. Ng, Emily H. Turner, Peggy D. Robertson, et al.Steven D. Flygare, Abigail W. Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E. Eichler, Michael Bamshad, Deborah A. Nickerson, Jay Shendure posted to hts cnv by vplagnol on 2009-08-17 22:58:54 as along with 23 people and 1 group seb1 hzoltan liqbbi chvlyl ongenetics psique fenghezi n00c dswan jmanning2k torfinnnome GeeSharpMinor pkonings neils djkt daforerog PabloMarin stubrown danmaclean xingxu druvus jandot frohike Journal picks
	Preferential deletion of exons in Duchenne and Becker muscular dystrophies [My Copy] Nature, Vol. 329, No. 6140. (21 October 1987), pp. 638-640. by S. M. Forrest, G. S. Cross, A. Speer, D. Gardner-Medwin, J. Burn, K. E. Davies posted to duchenne cnv by vplagnol on 2009-08-16 16:07:49 as
	Integrated detection and population-genetic analysis of SNPs and copy number variation. [My Copy] Nature genetics, Vol. 40, No. 10. (7 October 2008), pp. 1166-1174. by Steven A. McCarroll, Finny G. Kuruvilla, Joshua M. Korn, et al.Simon Cawley, James Nemesh, Alec Wysoker, Michael H. Shapero, Paul I. de Bakker, Julian B. Maller, Andrew Kirby, Amanda L. Elliott, Melissa Parkin, Earl Hubbell, Teresa Webster, Rui Mei, James Veitch, Patrick J. Collins, Robert Handsaker, Steve Lincoln, Marcia Nizzari, John Blume, Keith W. Jones, Rich Rava, Mark J. Daly, Stacey B. Gabriel, David Altshuler posted to wtcccplus_paper cnvbook cnv by vplagnol on 2009-07-31 10:00:16 as along with 20 people and 1 group shikin buyske turnersd sameersoi gruberjd Hans45 pdexheimer madreach waszak caseybrown rsantana Zephyrus psique jbsaltz Ema misonneh djkt daed rdiaz guhjy Roswell Cancer Crosstalk
	Association tests and software for copy number variant data. [My Copy] Human genomics, Vol. 3, No. 2. (1 January 2009), pp. 191-194. by Vincent Plagnol posted to association cnv by vplagnol on 2009-04-26 08:36:40 as along with 3 people guhjy daforerog jdbowes
	PennCNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data [My Copy] Genome Research, Vol. 17, No. 11. (5 November 2007), pp. 1665-1674. by Kai Wang, Mingyao Li, Dexter Hadley, et al.Rui Liu, Joseph Glessner, Struan F. A. Grant, Hakon Hakonarson, Maja Bucan posted to cnv by vplagnol on 2008-10-16 16:39:18 as along with 2 people rdiaz jfr
	A robust statistical method for case-control association testing with copy number variation. [My Copy] Nature genetics, Vol. 40, No. 10. (7 October 2008), pp. 1245-1252. by Chris Barnes, Vincent Plagnol, Tomas Fitzgerald, et al.Richard Redon, Jonathan Marchini, David Clayton, Matthew E. Hurles posted to association cnv statistics by vplagnol on 2008-10-12 08:45:26 as along with 16 people and 1 group biovils daed zufar daforerog pengchy ptrobajo waszak caseybrown Zephyrus dakelley buyske misonneh djkt rdiaz Stew guhjy Roswell Cancer Crosstalk
	PLINK: a tool set for whole-genome association and population-based linkage analyses. [My Copy] American journal of human genetics, Vol. 81, No. 3. (September 2007), pp. 559-575. by Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, et al.Lori Thomas, Manuel A. Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I. de Bakker, Mark J. Daly, Pak C. Sham posted to association cnv by vplagnol on 2008-10-11 17:32:22 as along with 10 people and 3 groups shikin natstreet xingxu maren daforerog ekostem misonneh Zephyrus stajich psique Roswell Cancer Crosstalk Mycology parkinson's disease references
	The fine-scale and complex architecture of human copy-number variation. [My Copy] American journal of human genetics, Vol. 82, No. 3. (24 March 2008), pp. 685-695. by George H. Perry, Amir Ben-Dor, Anya Tsalenko, et al.Nick Sampas, Laia Rodriguez-Revenga, Charles W. Tran, Alicia Scheffer, Israel Steinfeld, Peter Tsang, N. Alice Yamada, Han Soo S. Park, Jong-Il I. Kim, Jeong-Sun S. Seo, Zohar Yakhini, Stephen Laderman, Laurakay Bruhn, Charles Lee posted to cnv wtcccplus_paper by vplagnol on 2008-10-11 16:57:37 as along with 4 people psique daforerog daed guhjy
	Systematic assessment of copy number variant detection via genome-wide SNP genotyping. [My Copy] Nature genetics, Vol. 40, No. 10. (7 October 2008), pp. 1199-1203. by Gregory M. Cooper, Troy Zerr, Jeffrey M. Kidd, Evan E. Eichler, Deborah A. Nickerson posted to cnv wtcccplus_paper by vplagnol on 2008-10-11 10:42:57 as along with 12 people and 1 group shikin sameersoi daforerog psique maren pengchy waszak caseybrown Zephyrus misonneh rdiaz guhjy Roswell Cancer Crosstalk
	Copy-number variation and association studies of human disease. [My Copy] Nature genetics, Vol. 39, No. 7 Suppl. (July 2007) by Steven A. McCarroll, David M. Altshuler posted to association cnv by vplagnol on 2008-09-16 14:46:37 as along with 9 people and 1 group psique daforerog waszak jo_davies guhjy mrkrause balicea rdiaz jasonflannick Bioinformatics
	On the analysis of copy-number variations in genome-wide association studies: a translation of the family-based association test. [My Copy] Genetic epidemiology, Vol. 32, No. 3. (April 2008), pp. 273-284. by I. Ionita-Laza, G. H. Perry, B. A. Raby, et al.B. Klanderman, C. Lee, N. M. Laird, S. T. Weiss, C. Lange posted to cnvbook cnv association by vplagnol on 2008-09-16 14:04:40 as along with 3 people rdiaz maren guhjy
	Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs. [My Copy] Nature genetics, Vol. 40, No. 10. (7 October 2008), pp. 1253-1260. by Joshua M. Korn, Finny G. Kuruvilla, Steven A. McCarroll, et al.Alec Wysoker, James Nemesh, Simon Cawley, Earl Hubbell, Jim Veitch, Patrick J. Collins, Katayoon Darvishi, Charles Lee, Marcia M. Nizzari, Stacey B. Gabriel, Shaun Purcell, Mark J. Daly, David Altshuler posted to cnvbook cnv association by vplagnol on 2008-09-16 13:32:19 as along with 14 people shikin sameersoi fenghezi psique buyske maren guhjy pdexheimer pengchy caseybrown dakelley djkt daed rdiaz
	Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease [My Copy] Nat Genet, Vol. 40, No. 9. (2008), pp. 1107-1112. by Steven A. Mccarroll, Alan Huett, Petric Kuballa, et al.Shannon D. Chilewski, Aimee Landry, Philippe Goyette, Michael C. Zody, Jennifer L. Hall, Steven R. Brant, Judy H. Cho, Richard H. Duerr, Mark S. Silverberg, Kent D. Taylor, John D. Rioux, David Altshuler, Mark J. Daly, Ramnik J. Xavier posted to association cnv ibd by vplagnol on 2008-08-27 19:50:29 as along with 2 people gruberjd caseybrown
	A high-resolution survey of deletion polymorphism in the human genome. [My Copy] Nature genetics, Vol. 38, No. 1. (04 January 2006), pp. 75-81. by Donald F. Conrad, T. Daniel Andrews, Nigel P. Carter, Matthew E. Hurles, Jonathan K. Pritchard posted to cnv by vplagnol on 2008-08-26 23:27:21 as along with 6 people and 1 group sameersoi waszak bpb balajis ashandanj djkt Bioinformatics
	Copy number of FCGR3B, which is associated with systemic lupus erythematosus, correlates with protein expression and immune complex uptake [My Copy] J. Exp. Med., Vol. 205, No. 7. (7 July 2008), pp. 1573-1582. by Lisa C. Willcocks, Paul A. Lyons, Menna R. Clatworthy, et al.James I. Robinson, Wanling Yang, Stephen A. Newland, Vincent Plagnol, Naomi N. Mcgovern, Alison M. Condliffe, Edwin R. Chilvers, Dwomoa Adu, Elaine C. Jolly, Richard Watts, Yu L. Lau, Ann W. Morgan, Gerard Nash, Kenneth G. Smith posted to cnv fcgr fcgr3b sle by vplagnol on 2008-08-02 10:08:36 as along with 1 person yanicem
	Mapping and sequencing of structural variation from eight human genomes [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 56-64. by Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue, et al.Hillary S. Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, Alice N. Yamada, Peter Tsang, Tera L. Newman, Eray Tüzün, Ze Cheng, Heather M. Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A. Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin Mckernan, Lin Chen, Maika Malig, Joshua D. Smith, Joshua M. Korn, Steven A. Mccarroll, David A. Altshuler, Daniel A. Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A. Nickerson, James C. Mullikin, Richard K. Wilson, Laurakay Bruhn, Maynard V. Olson, Rajinder Kaul, Douglas R. Smith, Evan E. Eichler posted to cnv by vplagnol on 2008-06-20 00:23:52 as along with 35 people and 2 groups hzoltan n00c daed fstrozzi sameersoi jonilaserson ilyashl rdiaz dakelley xingxu alweber APRegier Annab smiddha daforerog vkwn frohike waszak matthewsuderman jfr hpaces Ema bpb dchughes djkt balicea shikin psique kintoki kaniko aprasad maximilianh chrisamiller guhjy skoch3 GeneGo Koch_Lab
	Psoriasis is associated with increased beta-defensin genomic copy number. [My Copy] Nature genetics, Vol. 40, No. 1. (2 January 2008), pp. 23-25. by Edward J. J. Hollox, Ulrike Huffmeier, Patrick L. J. M. L. Zeeuwen, et al.Raquel Palla, Jesús Lascorz, Diana Rodijk-Olthuis, Peter C. M. C. van de Kerkhof, Heiko Traupe, Gys de Jongh, Martin, André Reis, John A. L. A. Armour, Joost Schalkwijk posted to association cnv psoriasis by vplagnol on 2008-06-10 11:55:49 as along with 5 people leemachado daed jo_davies bootsy caseybrown
	The Influence of CCL3L1 Gene-Containing Segmental Duplications on HIV-1/AIDS Susceptibility [My Copy] Science, Vol. 307, No. 5714. (04 March 2005), pp. 1434-1440. by Enrique Gonzalez, Hemant Kulkarni, Hector Bolivar, et al.Andrea Mangano, Racquel Sanchez, Gabriel Catano, Robert J. Nibbs, Barry I. Freedman, Marlon P. Quinones, Michael J. Bamshad, Krishna K. Murthy, Brad H. Rovin, William Bradley, Robert A. Clark, Stephanie A. Anderson, Robert J. O'Connell, Brian K. Agan, Seema S. Ahuja, Rosa Bologna, Luisa Sen, Matthew J. Dolan, Sunil K. Ahuja posted to ccl3l1 cnv by vplagnol on 2008-01-20 21:47:05 as along with 3 people waszak mercaptan tkershaw
	Copy number polymorphism in FCGR3 predisposes to glomerulonephritis in rats and humans [My Copy] Nature, Vol. 439, No. 7078. (16 February 2006), pp. 851-855. by Timothy J. Aitman, Rong Dong, Timothy J. Vyse, et al.Penny J. Norsworthy, Michelle D. Johnson, Jennifer Smith, Jonathan Mangion, Cheri Roberton-Lowe, Amy J. Marshall, Enrico Petretto, Matthew D. Hodges, Gurjeet Bhangal, Sheetal G. Patel, Kelly Sheehan-Rooney, Mark Duda, Paul R. Cook, David J. Evans, Jan Domin, Jonathan Flint, Joseph J. Boyle, Charles D. Pusey, Terence H. Cook posted to association cnv fcgr3b by vplagnol on 2007-09-09 11:49:57 as along with 7 people and 2 groups leemachado cscweb daed ccots cmm breden guhjy FAB-lab SFUAntibodyResearch
	FCGR3B copy number variation is associated with susceptibility to systemic, but not organ-specific, autoimmunity. [My Copy] Nature genetics, Vol. 39, No. 6. (21 May 2007), pp. 721-723. by Manuela Fanciulli, Penny J. Norsworthy, Enrico Petretto, et al.Rong Dong, Lorraine Harper, Lavanya Kamesh, Joanne M. Heward, Stephen C. L. Gough, Adam de Smith, Alexandra I. F. Blakemore, Philippe Froguel, Catherine J. Owen, Simon H. S. Pearce, Luis Teixeira, Loic Guillevin, Deborah, Charles D. Pusey, Terence H. Cook, Timothy J. Vyse, Timothy J. Aitman posted to association cnv fcgr3b by vplagnol on 2007-09-09 11:32:09 as along with 3 people leemachado yanicem daed
	Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes [My Copy] Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853. by Barbara E. Stranger, Matthew S. Forrest, Mark Dunning, et al.Catherine E. Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P. Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W. Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E. Hurles, Emmanouil T. Dermitzakis posted to cnv geneexpression genomics by vplagnol on 2007-03-01 09:45:22 as along with 32 people and 5 groups biovils lp2 daveGerrard sameersoi timhubbard Zephyrus ajbattle jonilaserson ilyashl emptyhb buyske zufar koller waszak daed psique jo_davies srp33 guhjy jfr dpollard balicea rdiaz qfwills djkt shigepong jlangdon xingxu cisevol caseybrown frohike jandot Roswell Cancer Crosstalk Visiting Position Bioinformatics EisenLab cis-regulatory-evolution
	Global variation in copy number in the human genome [My Copy] Nature, Vol. 444, No. 7118. (23 November 2006), pp. 444-454. by Richard Redon, Shumpei Ishikawa, Karen R. Fitch, et al.Lars Feuk, George H. Perry, Daniel T. Andrews, Heike Fiegler, Michael H. Shapero, Andrew R. Carson, Wenwei Chen, Eun K. Cho, Stephanie Dallaire, Jennifer L. Freeman, Juan R. Gonzalez, Monica Gratacos, Jing Huang, Dimitrios Kalaitzopoulos, Daisuke Komura, Jeffrey R. Macdonald, Christian R. Marshall, Rui Mei, Lyndal Montgomery, Kunihiro Nishimura, Kohji Okamura, Fan Shen, Martin J. Somerville, Joelle Tchinda, Armand Valsesia, Cara Woodwark, Fengtang Yang, Junjun Zhang, Tatiana Zerjal, Jane Zhang, Lluis Armengol, Donald F. Conrad, Xavier Estivill, Chris Tyler-Smith, Nigel P. Carter, Hiroyuki Aburatani, Charles Lee, Keith W. Jones, Stephen W. Scherer, Matthew E. Hurles posted to cnv wtcccplus_paper by vplagnol on 2006-12-13 12:12:34 as along with 41 people and 7 groups sameersoi lp2 ilyashl ajbattle darian jonilaserson jrvalcourt turnersd guhjy daforerog noushin Glires ivanek waszak jo_davies psique bpb jfr balajis pradiptaray dpollard mtagaya adepace aswin rdiaz qfwills ealloza giovanni jeremymiller frohike vpschulz raiyar ramensky ccr azazello dbgrant colinveal xingxu srp33 Ema daed parkinson's disease references Bioinformatics EisenLab BioinfoCIPF GeschwindLab steinmetzlab MBLAB

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association	64
t1d	39
geneexpression	38
cnv	29
autoantibody	27
statistics	22
facs	18
x-chromosome-inactivation	14
ase	12
bacteria	11
facscalibration	11
cnvbook	10
popgen	10
ucl	10
autoimmunity	9
hla	9
ld	9
clustering	8
genotyping	8
ibd	8
rnaseq	8
statgen_mphil	8
gut	7
wtcccplus_paper	7
bcells	6
il2ra	6
mass_spectrometry	6
sle	6
alzheimer	5
gwas	5
ifih1	5
linkage	5
ms	5
ptpn22	5
ra	5
biomarker	4
ctla4	4
dasl	4
facsnormpaper	4
graves	4
schizophrenia	4
arabidopsis	3
autophagy	3
bayes	3
cd6	3
celiac	3
epidemiology	3
fcgr3b	3
ia2	3
ips	3
nod2	3
parkinson	3
pca_antibodies	3
pernicious_anemia	3
vitamind	3
abo	2
asthma	2
ccl2	2
ccr2	2
cd	2
fcgr	2
fcrl3	2
genomics	2
hgp	2
hts	2
hypertension	2
iga	2
il2	2
imputation	2
mcp1	2
methylation	2
neanderthal	2
neurological_disease	2
nod	2
normalisation	2
nrxn1	2
psoriasis	2
rps26	2
structure	2
t2d	2
tau_gene	2
tpo	2
treg	2
ad	1
addiction	1
addison	1
affymetrix	1
als	1
apoe	1
autism	1
bd	1
blc2	1
brain	1
cad	1
cancer	1
capture	1
ccl3l1	1
ccr5	1
cd11b	1
cd20	1
cd226	1
cd86	1
chd	1
chipseq	1
chromosome17	1
disc1	1
duchenne	1
elisa	1
em	1
epigenetics	1
eqtl	1
eqtls	1
fdr	1
gad	1
gender_bias	1
gene_expression	1
glm	1
icam	1
il10	1
il7r	1
immunity	1
indels	1
ins	1
insulin	1
inversion	1
lcls	1
luminex	1
lungcancer	1
lupus	1
mcmc	1
microarray	1
mmc	1
mouse	1
mr	1
mrp814	1
nanostring	1
review	1
rma	1
scoretest	1
sequencing	1
stat4	1
trios	1
tuberculosis	1
variability	1
wtccc	1

vplagnol's cnv [29 articles] Export

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