PDBe: Protein Data Bank in Europe Export

@article{citeulike:6069590, abstract = {The Protein Data Bank in Europe (PDBe) (http://www.ebi.ac.uk/pdbe/) is actively working with its Worldwide Protein Data Bank partners to enhance the quality and consistency of the international archive of bio-macromolecular structure data, the Protein Data Bank (PDB). PDBe also works closely with its collaborators at the European Bioinformatics Institute and the scientific community around the world to enhance its databases and services by adding curated and actively maintained derived data to the existing structural data in the PDB. We have developed a new database infrastructure based on the remediated PDB archive data and a specially designed database for storing information on interactions between proteins and bound molecules. The group has developed new services that allow users to carry out simple textual queries or more complex 3D structure-based queries. The newly designed PDBeView Atlas pages' provide an overview of an individual PDB entry in a user-friendly layout and serve as a starting point to further explore the information available in the PDBe database. PDBe's active involvement with the X-ray crystallography, Nuclear Magnetic Resonance spectroscopy and cryo-Electron Microscopy communities have resulted in improved tools for structure deposition and analysis. 10.1093/nar/gkp916}, author = {Velankar, S. and Best, C. and Beuth, B. and Boutselakis, C. H. and Cobley, N. and Sousa Da Silva, A. W. and Dimitropoulos, D. and Golovin, A. and Hirshberg, M. and John, M. and Krissinel, E. B. and Newman, R. and Oldfield, T. and Pajon, A. and Penkett, C. J. and Pineda-Castillo, J. and Sahni, G. and Sen, S. and Slowley, R. and Suarez-Uruena, A. and Swaminathan, J. and van Ginkel, G. and Vranken, W. F. and Henrick, K. and Kleywegt, G. J.}, citeulike-article-id = {6069590}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/nar/gkp916}, citeulike-linkout-1 = {http://nar.oxfordjournals.org/content/gkp916v1/.abstract}, citeulike-linkout-2 = {http://nar.oxfordjournals.org/content/gkp916v1/.full.pdf}, citeulike-linkout-3 = {http://view.ncbi.nlm.nih.gov/pubmed/19858099}, citeulike-linkout-4 = {http://www.hubmed.org/display.cgi?uids=19858099}, day = {25}, doi = {10.1093/nar/gkp916}, journal = {Nucl. Acids Res.}, keywords = {database, ebi, pdb, pdbe, protein\_structure, wwpdb}, month = {October}, pages = {gkp916+}, posted-at = {2009-11-04 15:26:46}, priority = {2}, title = {PDBe: Protein Data Bank in Europe}, url = {http://dx.doi.org/10.1093/nar/gkp916}, year = {2009} }

TY - JOUR ID - citeulike:6069590 L3 - citeulike-article-id:6069590 N2 - The Protein Data Bank in Europe (PDBe) (http://www.ebi.ac.uk/pdbe/) is actively working with its Worldwide Protein Data Bank partners to enhance the quality and consistency of the international archive of bio-macromolecular structure data, the Protein Data Bank (PDB). PDBe also works closely with its collaborators at the European Bioinformatics Institute and the scientific community around the world to enhance its databases and services by adding curated and actively maintained derived data to the existing structural data in the PDB. We have developed a new database infrastructure based on the remediated PDB archive data and a specially designed database for storing information on interactions between proteins and bound molecules. The group has developed new services that allow users to carry out simple textual queries or more complex 3D structure-based queries. The newly designed PDBeView Atlas pages' provide an overview of an individual PDB entry in a user-friendly layout and serve as a starting point to further explore the information available in the PDBe database. PDBe's active involvement with the X-ray crystallography, Nuclear Magnetic Resonance spectroscopy and cryo-Electron Microscopy communities have resulted in improved tools for structure deposition and analysis. 10.1093/nar/gkp916 JF - Nucl. Acids Res. TI - PDBe: Protein Data Bank in Europe SP - gkp916 KW - database KW - ebi KW - pdb KW - pdbe KW - protein_structure KW - wwpdb AU - Velankar, S AU - Best, C AU - Beuth, B AU - Boutselakis, CH AU - Cobley, N AU - Sousa Da Silva, AW AU - Dimitropoulos, D AU - Golovin, A AU - Hirshberg, M AU - John, M AU - Krissinel, EB AU - Newman, R AU - Oldfield, T AU - Pajon, A AU - Penkett, CJ AU - Pineda-Castillo, J AU - Sahni, G AU - Sen, S AU - Slowley, R AU - Suarez-Uruena, A AU - Swaminathan, J AU - van Ginkel, G AU - Vranken, WF AU - Henrick, K AU - Kleywegt, GJ PY - 2009/10/25/ UR - http://dx.doi.org/10.1093/nar/gkp916 ER -