waszak's watchlist [74 articles] Export

Recent papers matching waszak's watchlist criteria

	CNV-seq, a new method to detect copy number variation using high-throughput sequencing. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 80. by Chao Xie, Martti T. Tammi posted to acgh bioinformatics cnv copy genomics microarray number personal rearrangement sequencing solexa variation by sleepingcell to the group Bioinformatics on 2009-03-11 03:51:41 as along with 16 people stubrown cthachuk GustavoLacerda n00c darian bmenten natstreet sameersoi svenrahmann xiechao semrich pkonings rdiaz dswan neils magusina
	Detection of DNA copy number alterations in cancer by array comparative genomic hybridization. [My Copy] Genet Med, Vol. 9, No. 9. (September 2007), pp. 574-584. by E. Michels, K. De Preter, N. Van Roy, F. Speleman posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-19 04:02:58 as along with 2 people frohike hpaces
	A bayesian approach to copy-number-polymorphism analysis in nuclear pedigrees. [My Copy] Am J Hum Genet, Vol. 81, No. 4. (October 2007), pp. 808-812. by K. Kosta, I. Sabroe, J. Goke, et al.R. J. Nibbs, J. Tsanakas, M. K. Whyte, M. D. Teare posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-13 09:03:07 as along with 1 person and 1 group breden SFUAntibodyResearch
	GENOMICS: DNA Duplications and Deletions Help Determine Health. [My Copy] Science, Vol. 317, No. 5843. (7 September 2007), pp. 1315-1317. by J. Cohen posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-09 14:26:39 as along with 2 people and 3 groups dchughes ealloza G4ID BioinfoCIPF Genetics-of-Gambling
	The Diploid Genome Sequence of an Individual Human [My Copy] PLoS Biol, Vol. 5, No. 10. (4 September 2007), e254. by Samuel Levy, Granger Sutton, Pauline C. Ng, et al.Lars Feuk, Aaron L. Halpern, Brian P. Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F. Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R. MacDonald, Andy W. Pang, Mary Shago, Timothy B. Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A. Kravitz, Dana A. Busam, Karen Y. Beeson, Tina C. McIntosh, Karin A. Remington, Josep F. Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E. Frazier, Stephen W. Scherer, Robert L. Strausberg, J. Craig Venter posted to genomics cnv by sleepingcell to the group Bioinformatics on 2007-09-08 05:32:46 as along with 31 people n00c jgill pachorip Scis0000002 daforerog jessopher psique dakelley noushin jo_davies frohike adijr Neeperando operon carlblesius bpb balicea skhadar dullhunk djkt jackjackjjj ramensky massivemayhem jasonbobe PredictER lp2 cabbagezs xingxu hpaces maburkitt nhp
	Challenges and standards in integrating surveys of structural variation [My Copy] Nature Genetics, Vol. 39, No. 7 Suppl. (27 June 2007), pp. S7-S15. by Stephen W. Scherer, Charles Lee, Ewan Birney, et al.David M. Altshuler, Evan E. Eichler, Nigel P. Carter, Matthew E. Hurles, Lars Feuk posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-07 06:34:30 as along with 8 people owenlancaster dakelley brianb guhjy bpb rdiaz jlangdon jasonflannick
	Methods and strategies for analyzing copy number variation using DNA microarrays. [My Copy] Nature genetics, Vol. 39, No. 7 Suppl. (July 2007) by Nigel P. Carter posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-07 06:32:50 as along with 6 people vplagnol jo_davies guhjy jfr mrkrause rdiaz
	Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays [My Copy] PLoS Genetics, Vol. 3, No. 8. (1 August 2007), e143. by Mitchell Guttman, Carolyn Mies, Katarzyna Dudycz-Sulicz, et al.Sharon J. Diskin, Don A. Baldwin, Christian J. Stoeckert, Gregory R. Grant posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-30 09:47:49 as along with 5 people and 1 group lwaldron jfr rdiaz ealloza zwang BioinfoCIPF
	Sensitive and Specific Real-Time Polymerase Chain Reaction Assays to Accurately Determine Copy Number Variations (CNVs) of Human Complement C4A, C4B, C4-Long, C4-Short, and RCCX Modules: Elucidation of C4 CNVs in 50 Consanguineous Subjects with Defined HLA Genotypes. [My Copy] J Immunol, Vol. 179, No. 5. (1 September 2007), pp. 3012-3025. by Yee Ling L. Wu, Stephanie L L. Savelli, Yan Yang, et al.Bi Zhou, Brad H H. Rovin, Daniel J J. Birmingham, Haikady N N. Nagaraja, Lee A A. Hebert, C Yung Y. Yu posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-23 08:16:52 as along with 1 person gfliustu
	Analysis of Array CGH Data for Cancer Studies Using Fused Quantile Regression. [My Copy] Bioinformatics (20 July 2007) by Youjuan Li, Ji Zhu posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-06 08:19:09 as along with 2 people rdiaz shigepong
	Optimized design and assessment of whole genome tiling arrays. [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007) by Stefan Gräf, Fiona G G G. Nielsen, Stefan Kurtz, et al.Martijn A A. Huynen, Ewan Birney, Henk Stunnenberg, Paul Flicek posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-06 08:18:56 as along with 1 person kmdaily
	Modeling recurrent DNA copy number alterations in array CGH data [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i450-458. by Sohrab P. Shah, Wan L. Lam, Raymond T. Ng, Kevin P. Murphy posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-06 08:09:31 as along with 3 people stharward frohike pcarbo
	Robust smooth segmentation approach for array CGH data analysis. [My Copy] Bioinformatics (27 July 2007) by Jian Huang, Arief Gusnanto, Kathleen O'sullivan, Johan Staaf, Ake Borg, Yudi Pawitan posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-04 06:30:44 as along with 2 people rdiaz shigepong
	Array CGH analysis of copy number variation identifies 1284 new genes variant in healthy white males: implications for association studies of complex diseases. [My Copy] Human molecular genetics, Vol. 16, No. 23. (1 December 2007), pp. 2783-2794. by Adam J. de Smith, Anya Tsalenko, Nick Sampas, et al.Alicia Scheffer, N. Alice Yamada, Peter Tsang, Amir Ben-Dor, Zohar Yakhini, Richard J. Ellis, Laurakay Bruhn, Stephen Laderman, Philippe Froguel, Alexandra I. Blakemore posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:30:22 as along with 2 people vplagnol giovanni
	Gene copy number variation spanning 60 million years of human and primate evolution. [My Copy] Genome Res (31 July 2007) by Laura Dumas, Young H H. Kim, Anis Karimpour-Fard, et al.Michael Cox, Janet Hopkins, Jonathan R R. Pollack, James M M. Sikela posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:30:03 as along with 5 people and 2 groups brian balicea dchughes cabbagezs ljs G4ID Genetics-of-Gambling
	Copy-number variations and human disease. [My Copy] Am J Hum Genet, Vol. 81, No. 2. (August 2007), pp. 414-415. by R. A. Hegele posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:29:41 as
	Numbers of Copy-Number Variations and False-Negative Rates Will Be Underestimated If We Do Not Account for the Dependence between Repeated Experiments. [My Copy] Am J Hum Genet, Vol. 81, No. 2. (August 2007), pp. 418-420. by A. G. Lynch, J. C. Marioni, S. Tavare posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:29:20 as
	Flexible and Accurate Detection of Genomic Copy-Number Changes from aCGH. [My Copy] PLoS Comput Biol, Vol. 3, No. 6. (22 June 2007) by Oscar M M. Rueda, Ramón Díaz-Uriarte posted to cnv by sleepingcell to the group Bioinformatics on 2007-07-17 16:31:01 as along with 2 people jfr shigepong
	Preparation of genomic DNA for microarray-based comparative genome hybridization. [My Copy] Subcell Biochem, Vol. 40 (2006), pp. 363-371. by R. Kimmel, A. Icreverzi, P. Neiman posted to cnv chicken by sleepingcell to the group Bioinformatics on 2007-07-13 18:28:59 as
	Using expression arrays for copy number detection: an example from E. coli [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (14 June 2007), 203. by Dmitriy Skvortsov, Diana Abdueva, Michael Stitzer, Steven Finkel, Simon Tavare posted to cnv by sleepingcell to the group Bioinformatics on 2007-06-18 09:43:26 as along with 4 people and 1 group natstreet ealloza bioguru2000 shigepong BioinfoCIPF
	MLPA as a screening method of aneuploidy and unbalanced chromosomal rearrangements in spontaneous miscarriages. [My Copy] Prenat Diagn (4 June 2007) by Dan Diego-Alvarez, Marta Rodriguez R. de Alba, Rocio Cardero-Merlo, et al.Joaquin Diaz-Recasens, Carmen Ayuso, Carmen Ramos, Isabel Lorda-Sanchez posted to cnv by sleepingcell to the group Bioinformatics on 2007-06-05 17:54:19 as
	Efficient high-resolution deletion discovery in Caenorhabditis elegans by array comparative genomic hybridization. [My Copy] Genome Res, Vol. 17, No. 3. (March 2007), pp. 337-347. by J. S. Maydan, S. Flibotte, M. L. Edgley, et al.J. Lau, R. R. Selzer, T. A. Richmond, N. J. Pofahl, J. H. Thomas, D. G. Moerman posted to cnv by sleepingcell to the group Bioinformatics on 2007-05-05 17:54:08 as along with 3 people and 1 group thegoose2 tharris tardigrade C. elegans / WormBase
	Spatial normalization of array-CGH data [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006), 264. by Pierre Neuvial, Philippe Hupe, Isabel Brito, et al.Stephane Liva, Elodie Manie, Caroline Brennetot, Francois Radvanyi, Alain Aurias, Emmanuel Barillot posted to cnv by sleepingcell to the group Bioinformatics on 2007-05-05 17:08:25 as along with 3 people stharward pcahan1 Garamonfok
	Genomic variation: Copy number variation doesn't copy SNPs [My Copy] Nature Reviews Genetics, Vol. 8, No. 4. (06 March 2007), pp. 247-247. by Patrick Goymer posted to snp cnv by sleepingcell to the group Bioinformatics on 2007-05-04 17:01:14 as
	Human Genome Variation 2006: emerging views on structural variation and large-scale SNP analysis [My Copy] Nat Genet, Vol. 39, No. 2. (February 2007), pp. 153-155. by Goncalo Abecasis, Paul K. Tam, Carlos D. Bustamante, et al.Elaine A. Ostrander, Stephen W. Scherer, Stephen J. Chanock, Pui-Yan Kwok, Anthony J. Brookes posted to snp cnv by sleepingcell to the group Bioinformatics on 2007-05-04 17:00:31 as along with 2 people and 2 groups balajis dchughes G4ID Genetics-of-Gambling
	Copy number variation map [My Copy] Nature Reviews Genetics, Vol. 8, No. 1. (28 November 2006), pp. 2-2. by Magdalena Skipper posted to cnv by sleepingcell to the group Bioinformatics on 2007-05-04 16:49:47 as
	Continuous-index hidden Markov modelling of array CGH copy number data. [My Copy] Bioinformatics (19 February 2007) by Susann Stjernqvist, Tobias Rydén, Martin Sköld, Johan Staaf posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-30 15:10:11 as along with 1 person shigepong
	Assessing the need for sequence-based normalization in tiling microarray experiments. [My Copy] Bioinformatics (25 March 2007) by Thomas E E. Royce, Joel S S. Rozowsky, Mark B B. Gerstein posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-30 15:10:01 as along with 5 people jfr mmarchin nicholso bertelsen GeeSharpMinor
	Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays. [My Copy] BMC genomics, Vol. 8, No. 1. (2007) by Herbert Auer, David L. Newsom, Norma J. Nowak, et al.Kirk M. McHugh, Sunita Singh, Chack-Yung Y. Yu, Yan Yang, Gail D. Wenger, Julie M. Gastier-Foster, Karl Kornacker posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-30 15:09:27 as along with 2 people shikin jfr
	A faster circular binary segmentation algorithm for the analysis of array CGH data. [My Copy] Bioinformatics (18 January 2007) by E S S. Venkatraman, A B B. Olshen posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-25 14:53:47 as along with 5 people noushin daed rdiaz shigepong ellakat
	Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data. [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 19. (1 October 2005), pp. 3763-3770. by Weil R. Lai, Mark D. Johnson, Raju Kucherlapati, Peter J. Park posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-20 08:24:24 as along with 7 people shikin pcahan1 gpalidwor rdiaz ma_ko OscarRueda jackjackjjj
	A comparison study: applying segmentation to array CGH data for downstream analyses. [My Copy] Bioinformatics (14 September 2005) by Hanni Willenbrock, Jane Fridlyand posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-20 08:24:09 as along with 4 people pcahan1 archroad rdiaz OscarRueda
	Temperature Sex Reversal Implies Sex Gene Dosage in a Reptile [My Copy] Science, Vol. 316, No. 5823. (20 April 2007), 411. by Alexander E. Quinn, Arthur Georges, Stephen D. Sarre, Fiorenzo Guarino, Tariq Ezaz, Jennifer A. Graves posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 22:26:36 as
	A versatile statistical analysis algorithm to detect genome copy number variation. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 46. (16 November 2004), pp. 16292-16297. by R. S. Daruwala, A. Rudra, H. Ostrer, R. Lucito, M. Wigler, B. Mishra posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-19 19:16:04 as along with 3 people rdiaz OscarRueda bioguru2000
	Comparative genomic hybridization using oligonucleotide microarrays and total genomic DNA. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 51. (21 December 2004), pp. 17765-17770. by M. T. Barrett, A. Scheffer, A. Ben-Dor, et al.N. Sampas, D. Lipson, R. Kincaid, P. Tsang, B. Curry, K. Baird, P. S. Meltzer, Z. Yakhini, L. Bruhn, S. Laderman posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:52 as
	Frequency of new copy number variation in humans [My Copy] Nature Genetics, Vol. 37, No. 4., pp. 333-334. by Gert-Jan B. v. van Ommen posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:25 as
	Segmental duplications and copy-number variation in the human genome. [My Copy] American journal of human genetics, Vol. 77, No. 1. (July 2005), pp. 78-88. by A. J. Sharp, D. P. Locke, S. D. McGrath, et al.Z. Cheng, J. A. Bailey, R. U. Vallente, L. M. Pertz, R. A. Clark, S. Schwartz, R. Segraves, V. V. Oseroff, D. G. Albertson, D. Pinkel, E. E. Eichler posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:14 as along with 7 people and 3 groups stharward dakelley daed pcahan1 balicea dchughes giovanni G4ID GeschwindLab Genetics-of-Gambling
	Array comparative genomic hybridization and its applications in cancer. [My Copy] Nature genetics, Vol. 37 Suppl (June 2005) by Daniel Pinkel, Donna G. Albertson posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:03 as along with 8 people and 2 groups shikin textoris rfrousse pcahan1 archroad rdiaz tvdbulck frohike Institut_Hemato_Oncologie_Pediatrique Neuroblastome_SFCE
	Copy-number polymorphisms: mining the tip of an iceberg. [My Copy] Trends Genet, Vol. 21, No. 6. (June 2005), pp. 315-317. by P. G. Buckley, K. K. Mantripragada, A. Piotrowski, T. Diaz de Ståhl, J. P. Dumanski posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:53 as along with 2 people pcahan1 bioguru2000
	Comparative genomic hybridization. [My Copy] Annu Rev Genomics Hum Genet, Vol. 6 (2005), pp. 331-354. by D. Pinkel, D. G. Albertson posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:44 as along with 1 person uz_labu_laimi
	Recent advances in array comparative genomic hybridization technologies and their applications in human genetics. [My Copy] European journal of human genetics : EJHG, Vol. 14, No. 2. (February 2006), pp. 139-148. by William W. Lockwood, Raj Chari, Bryan Chi, Wan L. Lam posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:31 as along with 2 people giovenko rdiaz
	Screening of copy number polymorphisms in human beta-defensin genes using modified real-time quantitative PCR. [My Copy] J Immunol Methods, Vol. 308, No. 1-2. (20 January 2006), pp. 231-240. by Q. Chen, M. Book, X. Fang, A. Hoeft, F. Stuber posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:08 as
	Structural variation in the human genome [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 85-97. by Lars Feuk, Andrew R. Carson, Stephen W. Scherer posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:13:53 as along with 26 people and 10 groups ajbattle bertelsen baizhang APRegier Neeperando xingxu daforerog psique Zephyrus dlobo jandot cgreal balajis bala balicea dchughes tabu darcyduke adepace AaronDarling rdiaz massivemayhem cat_worth jmrivort ccr Lip GEB CGREL structural_bioinformatics EisenLab SFX-Verde-team-MITLibraries G4ID G-quadruplex Supramolecular DictyosteliumGroup Genetics-of-Gambling
	Strategies for the detection of copy number and other structural variants in the human genome. [My Copy] Hum Genomics, Vol. 2, No. 6. (June 2006), pp. 403-414. by A. R. Carson, L. Feuk, M. Mohammed, S. W. Scherer posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:06:35 as along with 2 people and 1 group indigoviolet rdiaz EisenLab
	Integrating copy number polymorphisms into array CGH analysis using a robust HMM. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by S. P. Shah, X. Xuan, R. J. Deleeuw, et al.M. Khojasteh, W. L. Lam, R. Ng, K. P. Murphy posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:06:18 as along with 5 people pcahan1 rdiaz OscarRueda jackjackjjj frohike
	ChromoScan: a scan statistic application for identifying chromosomal regions in genomic studies. [My Copy] Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2945-2947. by Y. V. Sun, D. M. Jacobsen, S. L. Kardia posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:06:00 as
	A hierarchical clustering method for estimating copy number variation. [My Copy] Biostatistics (23 October 2006) by Baifang Xing, Celia M T M. Greenwood, Shelley B B. Bull posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:05:48 as along with 2 people jfr shigepong
	Structural divergence between the human and chimpanzee genomes. [My Copy] Human genetics, Vol. 120, No. 6. (February 2007), pp. 759-778. by Hildegard Kehrer-Sawatzki, David N. Cooper posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:05:27 as along with 2 people farhat hpaces
	Analysis of copy number variation in the normal human population within a region containing complex segmental duplications on 22q11 using high-resolution array-CGH. [My Copy] Genomics, Vol. 88, No. 2. (August 2006), pp. 152-162. by C. de Bustos, T. Díaz de Ståhl, A. Piotrowski, et al.K. K. Mantripragada, P. G. Buckley, E. Darai, C. M. Hansson, G. Grigelionis, U. Menzel, J. P. Dumanski posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:04:52 as
	WebaCGH: an interactive online tool for the analysis and display of array comparative genomic hybridisation data. [My Copy] Appl Bioinformatics, Vol. 5, No. 2. (2006), pp. 125-130. by C. Frankenberger, X. Wu, J. Harmon, et al.D. Church, L. M. Gangi, D. J. Munroe, U. Urzúa posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:04:32 as along with 1 person rdiaz

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microarray	60
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cnv	27
software	24
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waszak's watchlist [74 articles] Export

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