P-SEA: a new efficient assignment of secondary structure from Calpha trace of proteins Export

@article{citeulike:398595, abstract = {Motivation: The secondary structure is a key element of architectural organization in proteins. Accurate assignment of the secondary structure elements (SSE) (helix, strand, coil) is an essential step for the analysis and modelling of protein structure. Various methods have been proposed to assign secondary structure. Comparative studies of their results have shown some of their drawbacks, pointing out the difficulties in the task of SSE assignment. Results: We have designed a new automatic method, named P-SEA, to assign efficiently secondary structure from the sole C{alpha} position. Some advantages of the new algorithm are discussed. Availability: The program P-SEA is available by anonymous ftp: ftp.lmcp.jussieu.fr directory:pub/ 10.1093/bioinformatics/13.3.291}, author = {Labesse, G. and Colloc'h, N. and Pothier, J. and Mornon, J. P.}, citeulike-article-id = {398595}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/13.3.291}, citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/13/3/291}, citeulike-linkout-2 = {http://view.ncbi.nlm.nih.gov/pubmed/9183534}, citeulike-linkout-3 = {http://www.hubmed.org/display.cgi?uids=9183534}, day = {1}, doi = {10.1093/bioinformatics/13.3.291}, journal = {Comput. Appl. Biosci.}, keywords = {protein-structure, secondary-structure}, month = {June}, number = {3}, pages = {291--295}, posted-at = {2007-10-03 15:16:01}, priority = {2}, title = {P-SEA: a new efficient assignment of secondary structure from C{alpha} trace of proteins}, url = {http://dx.doi.org/10.1093/bioinformatics/13.3.291}, volume = {13}, year = {1997} }

TY - JOUR ID - citeulike:398595 L3 - citeulike-article-id:398595 N2 - Motivation: The secondary structure is a key element of architectural organization in proteins. Accurate assignment of the secondary structure elements (SSE) (helix, strand, coil) is an essential step for the analysis and modelling of protein structure. Various methods have been proposed to assign secondary structure. Comparative studies of their results have shown some of their drawbacks, pointing out the difficulties in the task of SSE assignment. Results: We have designed a new automatic method, named P-SEA, to assign efficiently secondary structure from the sole C{alpha} position. Some advantages of the new algorithm are discussed. Availability: The program P-SEA is available by anonymous ftp: ftp.lmcp.jussieu.fr directory:pub/ 10.1093/bioinformatics/13.3.291 IS - 3 JF - Comput. Appl. Biosci. EP - 295 TI - P-SEA: a new efficient assignment of secondary structure from C{alpha} trace of proteins VL - 13 SP - 291 KW - protein-structure KW - secondary-structure AU - Labesse, G AU - Colloc'h, N AU - Pothier, J AU - Mornon, JP PY - 1997/06/01/ UR - http://dx.doi.org/10.1093/bioinformatics/13.3.291 ER -