xdeupi's gpcr [109 articles] Export

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	Modern Homology Modeling of G-Protein Coupled Receptors: Which Structural Template to Use? [My Copy] Journal of Medicinal Chemistry, Vol. 52, No. 16. (27 August 2009), pp. 5207-5216. by Juan C. Mobarec, Roberto Sanchez, Marta Filizola posted to theory modeling gpcr docking by xdeupi on 2009-10-08 16:39:12 as along with 1 person reyez
	Modeling G protein-coupled receptors for structure-based drug discovery using low-frequency normal modes for refinement of homology models: Application to H3 antagonists. [My Copy] Proteins (12 August 2009) by Brajesh K. Rai, Gregory J. Tawa, Alan H. Katz, Christine Humblet posted to theory modeling md gpcr by xdeupi on 2009-10-06 19:31:07 as
	Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models. [My Copy] PloS one, Vol. 4, No. 9. (2009) by Catherine L. Worth, Gunnar Kleinau, Gerd Krause posted to structure sequence review modeling gpcr by xdeupi on 2009-10-06 19:24:07 as
	Conserved waters mediate structural and functional activation of family A (rhodopsin-like) G protein-coupled receptors. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 21. (26 May 2009), pp. 8555-8560. by Thomas E. Angel, Mark R. Chance, Krzysztof Palczewski posted to water structure review gpcr activation by xdeupi on 2009-10-06 18:17:17 as along with 1 person agrossfield
	Homology modeling of GPCRs. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 552 (2009), pp. 97-113. by John Simms, Nathan E. Hall, Polo H. Lam, et al.Laurence J. Miller, Arthur Christopoulos, Ruben Abagyan, Patrick M. Sexton posted to theory review modeling gpcr by xdeupi on 2009-10-06 18:14:40 as
	FRET-based measurement of GPCR conformational changes. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 552 (2009), pp. 253-268. by Sébastien Granier, Samuel Kim, Juan José J. Fung, Michael P. Bokoch, Charles Parnot posted to gpcr fret conformational_changes by xdeupi on 2009-10-06 18:13:38 as
	Comparative analysis of GPCR crystal structures. [My Copy] Photochemistry and photobiology, Vol. 85, No. 2. (r 2009), pp. 425-430. by David T. Lodowski, Thomas E. Angel, Krzysztof Palczewski posted to structure review gpcr by xdeupi on 2009-10-06 18:07:41 as
	gpDB: a database of GPCRs, G-proteins, effectors and their interactions. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 12. (15 June 2008), pp. 1471-1472. by Margarita C. Theodoropoulou, Pantelis G. Bagos, Ioannis C. Spyropoulos, Stavros J. Hamodrakas posted to webserver theory gproteins gpcr by xdeupi on 2009-10-06 18:02:45 as along with 1 person guhjy
	New vistas in GPCR 3D structure prediction [My Copy] Journal of Molecular Modeling by Anwar Rayan posted to theory sequence_alignment sequence modeling gpcr by xdeupi on 2009-10-06 17:47:03 as along with 1 person arnaucordomi
	Definition of the G Protein-Coupled Receptor Transmembrane Bundle Binding Pocket and Calculation of Receptor Similarities for Drug Design [My Copy] Journal of Medicinal Chemistry, Vol. 52, No. 14. (23 July 2009), pp. 4429-4442. by David E. Gloriam, Steven M. Foord, Frank E. Blaney, Stephen L. Garland posted to theory gpcr drug binding_site by xdeupi on 2009-10-06 17:42:06 as
	Understanding the Ligand-Receptor-G Protein Ternary Complex for GPCR Drug Discovery. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 552 (2009), pp. 67-77. by V. R. Ratnala, B. Kobilka posted to activation gpcr review by xdeupi on 2009-06-25 16:46:39 as
	Predicting structurally conserved contacts for homologous proteins using sequence conservation filters [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 77, No. 2. (20 April 2009), pp. 448-453. by Mayako Michino, Charles L. Brooks posted to gpcr structure theory by xdeupi on 2009-06-09 15:46:32 as along with 1 person and 1 group AliC Orengo Group Journal Picks
	X-ray structure breakthroughs in the GPCR transmembrane region. [My Copy] Biochemical pharmacology, Vol. 78, No. 1. (1 July 2009), pp. 11-20. by Sid Topiol, Michael Sabio posted to gpcr review structure by xdeupi on 2009-06-09 15:41:31 as along with 1 person diod
	The structure and function of G-protein-coupled receptors [My Copy] Nature, Vol. 459, No. 7245. (20 May 2009), pp. 356-363. by Daniel M. Rosenbaum, Soren G. F. Rasmussen, Brian K. Kobilka posted to gpcr review by xdeupi on 2009-06-09 15:38:24 as along with 8 people diod guhjy viktor21614 agrossfield patricia akundaje hsekiguc barry
	Kinetics of G-protein-coupled receptor signals in intact cells [My Copy] British Journal of Pharmacology, Vol. 153, No. S1. (14 March 2008), pp. S125-S132. by M. J. Lohse, P. Hein, C. Hoffmann, V. O. Nikolaev, J. P. Vilardaga, M. Bünemann posted to activation gpcr kinetics by xdeupi on 2009-05-22 11:54:35 as along with 3 people diod guhjy amwands
	An Indel in Transmembrane Helix 2 Helps to Trace the Molecular Evolution of Class A G-Protein-Coupled Receptors [My Copy] Journal of Molecular Evolution by Julie Devillé, Julien Rey, Marie Chabbert posted to evolution gpcr pro-kink tm2 by xdeupi on 2009-05-06 10:05:37 as
	A surface of the kinase domain critical for the allosteric activation of G protein-coupled receptor kinases. [My Copy] The Journal of biological chemistry (13 April 2009) by Chih-Chin C. Huang, Kae Yoshino-Koh, John J G J. Tesmer posted to gpcr grk kinase protein_docking by xdeupi on 2009-05-06 10:02:59 as
	Revisiting Automated G-Protein Coupled Receptor Modeling: The Benefit of Additional Template Structures for a Neurokinin-1 Receptor Model. [My Copy] Journal of medicinal chemistry (28 April 2009) by Benny Kneissl, Bettina Leonhardt, Andreas Hildebrandt, Christofer S S. Tautermann posted to docking gpcr ligands modeling neurokinin by xdeupi on 2009-05-06 09:47:25 as along with 1 person reyez
	Crystal structure of the ligand-free G-protein-coupled receptor opsin [My Copy] Nature, Vol. 454, No. 7201. (10 July 2008), pp. 183-187. by Jung H. Park, Patrick Scheerer, Klaus P. Hofmann, Hui-Woog Choe, Oliver P. Ernst posted to activation active-state crystallography gpcr npxxy pro-kink rhodopsin structure by xdeupi on 2009-01-28 10:28:21 as along with 2 people reyez mrasch
	Crystal structure of opsin in its G-protein-interacting conformation [My Copy] Nature, Vol. 455, No. 7212. (2008), pp. 497-502. by Patrick Scheerer, Jung H. Park, Peter W. Hildebrand, et al.Yong J. Kim, Norbert Krausz, Hui-Woog Choe, Klaus P. Hofmann, Oliver P. Ernst posted to activation active-state crystallography dry gpcr rhodopsin structure by xdeupi on 2009-01-28 09:53:31 as along with 5 people and 1 group IrinaMoreira zwang reyez stajich neils Mycology
	Topology of class A G protein-coupled receptors: insights gained from crystal structures of rhodopsins, adrenergic and adenosine receptors. [My Copy] Molecular pharmacology, Vol. 75, No. 1. (January 2009), pp. 1-12. by D. Mustafi, K. Palczewski posted to gpcr review by xdeupi on 2009-01-28 09:51:43 as along with 1 person merj
	G-protein coupled receptors, cholesterol and palmitoylation: facts about fats. [My Copy] Journal of molecular endocrinology (8 January 2009) by Bice Chini, Marco Parenti posted to cholesterol cterm gpcr helix8 membrane by xdeupi on 2009-01-19 13:54:55 as
	Roles of G-protein-coupled receptor signaling in cancer biology and gene transcription. [My Copy] Curr Opin Genet Dev, Vol. 17, No. 1. (February 2007), pp. 40-44. by B. D. Spiegelberg, H. E. Hamm posted to cancer gpcr review by xdeupi on 2009-01-12 16:01:17 as along with 1 person guhjy
	G protein-coupled receptors and their signaling pathways: classical therapeutical targets susceptible to novel therapeutic concepts. [My Copy] Current pharmaceutical design, Vol. 10, No. 16. (2004), pp. 1937-1958. by C. Liebmann posted to cancer gpcr review by xdeupi on 2009-01-12 15:58:01 as
	Overexpression of G protein-coupled receptors in cancer cells: involvement in tumor progression. [My Copy] Int J Oncol, Vol. 27, No. 5. (November 2005), pp. 1329-1339. by S. Li, S. Huang, S. B. Peng posted to cancer disease expression gpcr review by xdeupi on 2009-01-12 15:56:58 as along with 1 person and 1 group isaacstone olfscience
	Investigation of transmembrane proteins using a computational approach. [My Copy] BMC genomics, Vol. 9 Suppl 1 (2008) by J. Y. Yang, M. Q. Yang, A. K. Dunker, Y. Deng, X. Huang posted to disorder gpcr loops membrane_proteins structure theory transmembrane by xdeupi on 2008-10-20 22:23:57 as
	Physiological relevance of GPCR oligomerization and its impact on drug discovery. [My Copy] Drug discovery today, Vol. 13, No. 23-24. (14 December 2008), pp. 1059-1066. by Rosemarie Panetta, Michael T. Greenwood posted to dimer disease drug gpcr ligands pharmacology review by xdeupi on 2008-10-16 09:57:50 as along with 1 person guhjy
	The 2.6 Angstrom Crystal Structure of a Human A2A Adenosine Receptor Bound to an Antagonist [My Copy] Science (2 October 2008), 1164772. by Veli-Pekka Jaakola, Mark T. Griffith, Michael A. Hanson, et al.Vadim Cherezov, Ellen Y. Chien, Robert J. Lane, Adriaan P. Ijzerman, Raymond C. Stevens posted to binding crystallography docking gpcr ligands structure xray by xdeupi on 2008-10-15 10:02:26 as along with 1 person and 1 group cen4ik LabCompMed
	Seven transmembrane receptors: a brief personal retrospective. [My Copy] Biochimica et biophysica acta, Vol. 1768, No. 4. (April 2007), pp. 748-755. by R. J. Lefkowitz posted to gpcr lmc_101 review by xdeupi on 2008-09-02 11:50:30 as along with 1 person IrinaMoreira
	Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region. [My Copy] The Journal of biological chemistry (6 May 2008) by Tatsuro Shimamura, Kenji Hiraki, Naoko Takahashi, et al.Tetsuya Hori, Hideo Ago, Katsuyoshi Masuda, Koji Takio, Masaji Ishiguro, Masashi Miyano posted to crystallography cterm gpcr rhodopsin structure xray by xdeupi on 2008-05-13 16:19:24 as along with 1 group LabCompMed
	Crystallizing thinking about the beta2-adrenergic receptor. [My Copy] Mol Pharmacol (31 January 2008) by Arun K K. Shukla, Jin-Peng P. Sun, Robert J J. Lefkowitz posted to b2ar crystallography gpcr review by xdeupi on 2008-05-13 16:09:07 as along with 3 people agrossfield tkershaw merj
	Mechanisms of Inter- and Intramolecular Communication in GPCRs and G Proteins [My Copy] J. Am. Chem. Soc. (12 March 2008) by F. Raimondi, M. Seeber, P. G. Debenedetti, F. Fanelli posted to activation docking gpcr gproteins by xdeupi on 2008-05-03 17:09:50 as along with 1 person paulschlesinger
	Stable interactions between the transmembrane domains of the adenosine A<SUB><FONT SIZE='-1'>2A</FONT></SUB> receptor [My Copy] Protein Science, Vol. 17, No. 7. (23 April 2008), pp. 1188-1199. by Damien Thévenin, Tzvetana Lazarova posted to folding gpcr structure transmembrane by xdeupi on 2008-04-28 11:00:29 as along with 1 person IrinaMoreira
	The G protein-coupled receptor kinase (GRK) interactome: role of GRKs in GPCR regulation and signaling. [My Copy] Biochim Biophys Acta, Vol. 1768, No. 4. (April 2007), pp. 913-922. by C. Ribas, P. Penela, C. Murga, et al.A. Salcedo, C. García-Hoz, M. Jurado-Pueyo, I. Aymerich, F. Mayor posted to activation arrestin gpcr grk by xdeupi on 2007-07-30 14:59:43 as along with 1 person and 1 group guhjy LabCompMed
	G-protein-coupled receptor signalling through protein networks. [My Copy] Biochem Soc Trans, Vol. 35, No. Pt 1. (February 2007), pp. 23-27. by A. D. Strosberg, C. Nahmias posted to b2ar gpcr pharmacology review structure by xdeupi on 2007-06-29 21:10:57 as along with 1 group LabCompMed
	Heterologous Expression of the Adenosine A1 Receptor in Transgenic Mouse Retina. [My Copy] Biochemistry (20 June 2007) by Ning Li, David Salom, Li Zhang, et al.Tim Harris, Juan A. Ballesteros, Marcin Golczak, Beata Jastrzebska, Krzysztof Palczewski, Carole Kurahara, Todd Juan, Steven Jordan, John A. Salon posted to expression gpcr pharmacology by xdeupi on 2007-06-25 10:09:54 as along with 1 group LabCompMed
	Structures and spectral signatures of protonated water networks in bacteriorhodopsin. [My Copy] Proc Natl Acad Sci U S A, Vol. 104, No. 17. (24 April 2007), pp. 6980-6985. by G. Mathias, D. Marx posted to activation gpcr protonation rhodopsin theory water by xdeupi on 2007-06-11 10:25:44 as along with 2 people and 1 group vahmurk saravan LabCompMed
	Constitutive activity and inverse agonism at the alpha1adrenoceptors. [My Copy] Biochem Pharmacol, Vol. 73, No. 8. (15 April 2007), pp. 1076-1083. by S. Cotecchia posted to activation gpcr review by xdeupi on 2007-06-02 19:31:15 as along with 1 group LabCompMed
	Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base [My Copy] BMC Bioinformatics, Vol. 8 (30 May 2007), 177. by Lucy Skrabanek, Marta Murcia, Michel Bouvier, et al.Lakshmi Devi, Susan R. George, Martin J. Lohse, Graeme Milligan, Richard Neubig, Krzysztof Palczewski, Marc Parmentier, Jean-Philippe Pin, Gerrit Vriend, Jonathan A. Javitch, Fabien Campagne, Marta Filizola posted to dimer gpcr review by xdeupi on 2007-06-02 19:25:57 as along with 1 group LabCompMed
	Structure-function of alpha1-adrenergic receptors. [My Copy] Biochemical pharmacology, Vol. 73, No. 8. (15 April 2007), pp. 1051-1062. by Dianne M. Perez posted to activation gpcr review by xdeupi on 2007-06-02 19:21:05 as along with 1 person and 1 group diod LabCompMed
	G protein coupled receptor structure and activation. [My Copy] Biochim Biophys Acta, Vol. 1768, No. 4. (April 2007), pp. 794-807. by B. K. Kobilka posted to activation b2ar gpcr lmc_101 review switch by xdeupi on 2007-06-02 19:19:32 as along with 4 people and 2 groups guhjy Fritz merj adamsdi neurolit LabCompMed
	Structural models of class a g protein-coupled receptors as a tool for drug design: insights on transmembrane bundle plasticity. [My Copy] Curr Top Med Chem, Vol. 7, No. 10. (2007), pp. 999-1006. by X. Deupi, N. Dölker, M. L. López-Rodríguez, M. Campillo, J. A. Ballesteros, L. Pardo posted to binding gpcr modeling plasticity structure by xdeupi on 2007-05-28 08:51:54 as along with 1 group LabCompMed
	The tachykinin tale: molecular recognition in a historical perspective. [My Copy] J Mol Recognit (20 April 2007) by Thomas Werge posted to gpcr neurokinin review by xdeupi on 2007-05-02 09:00:00 as along with 1 group LabCompMed
	Multiple signaling states of G-protein-coupled receptors. [My Copy] Pharmacol Rev, Vol. 57, No. 2. (June 2005), pp. 147-161. by D. M. Perez, S. S. Karnik posted to activation agonist gpcr pharmacology review rhodopsin switch by xdeupi on 2007-04-26 14:57:25 as along with 1 group LabCompMed
	Helix packing moments reveal diversity and conservation in membrane protein structure. [My Copy] J Mol Biol, Vol. 337, No. 3. (26 March 2004), pp. 713-729. by W. Liu, M. Eilers, A. B. Patel, S. O. Smith posted to gpcr helix membrane_proteins rhodopsin sequence ser structure transmembrane by xdeupi on 2007-04-26 13:49:38 as along with 1 group LabCompMed
	Peptide design and structural characterization of a GPCR loop mimetic. [My Copy] Biopolymers (18 April 2007) by Truc-Chi T C. Pham, Richard W W. Kriwacki, Abby L L. Parrill posted to gpcr loops modeling structure by xdeupi on 2007-04-23 10:24:23 as along with 1 group LabCompMed
	Pharmacogenomic and structural analysis of constitutive g protein-coupled receptor activity. [My Copy] Annu Rev Pharmacol Toxicol, Vol. 47 (2007), pp. 53-87. by M. J. Smit, H. F. Vischer, R. A. Bakker, et al.A. Jongejan, H. Timmerman, L. Pardo, R. Leurs posted to activation disease gpcr modeling review structure switch by xdeupi on 2007-04-17 12:35:15 as along with 1 group LabCompMed
	Synthesis of TOAC spin-labeled proteins and reconstitution in lipid membranes. [My Copy] Nat Protoc, Vol. 2, No. 1. (2007), pp. 42-49. by C. B. Karim, Z. Zhang, D. D. Thomas posted to dynamics gpcr toac by xdeupi on 2007-04-10 19:30:43 as along with 1 group LabCompMed
	Heterologous GPCR Expression: A Bottleneck to Obtaining Crystal Structures. [My Copy] Biotechnol Prog (31 March 2007) by Emily C. McCusker, Steven E. Bane, Michelle A. O'malley, Anne S. Robinson posted to crystallography gpcr review by xdeupi on 2007-04-10 19:18:56 as along with 1 person and 1 group merj LabCompMed
	Systematic analysis of the entire second extracellular loop of the V1a vasopressin receptor: Key residues, conserved throughout a G-protein-coupled receptor family, identified. [My Copy] J Biol Chem (2 April 2007) by Matthew Conner, Stuart R R. Hawtin, John Simms, et al.Denise L L. Wootten, Zoe Lawson, Alex C C. Conner, Rosemary A A. Parslow, Mark Wheatley posted to activation amine binding ecl2 gpcr loops by xdeupi on 2007-04-10 18:59:06 as along with 1 group LabCompMed

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activation	170
gpcr	109
structure	89
rhodopsin	78
review	63
modeling	62
b2ar	58
dynamics	56
helix	50
transmembrane	47
agonist	46
binding	44
theory	42
ligands	41
drug	36
md	35
switch	34
membrane_proteins	31
crystallography	30
nmr	30
pharmacology	30
membrane	26
gproteins	23
dimer	20
fluorescence	18
sequence	17
ser	17
active-state	15
folding	14
fret	14
genome	14
loops	14
pro-kink	14
flexibility	13
disease	12
tm6	12
cterm	11
mutation	11
retinal	11
amber	10
evolution	10
toggle	10
docking	9
energy_landscape	9
kinetics	9
lipids	9
neurokinin	9
tm5	9
arrestin	8
chemokine	8
gpcrs	8
hbond	8
helix8	8
imaging	8
bimane	7
cancer	7
channel	7
ecl2	7
gly	7
icl3	7
ionic	7
lmc_101	7
plasticity	7
protonation	7
tm3	7
w648	7
cation-pi	6
ccr5	6
cys_scanning	6
d250	6
internalization	6
npxxy	6
opioid	6
thyrotropin	6
tm2	6
xray	6
amine	5
binding_kinetics	5
conformational_changes	5
dimerization	5
dry	5
expression	5
lock	5
polymorphism	5
spectroscopy	5
thr	5
trp	5
antagonist	4
cam	4
cholesterol	4
disorder	4
hormone	4
n749	4
nterm	4
pathway	4
tm7	4
water	4
angiotensin	3
biased_agonism	3
cxcr1	3
grk	3
histamine	3
n745	3
oligomerization	3
spin_labeling	3
toac	3
webserver	3
5ht1a	2
chimera	2
crosslinking	2
em	2
leukotriene	2
lhr	2
networks	2
pathways	2
phylogeny	2
s542	2
solvation	2
tm1	2
tmhs	2
txp	2
b1ar	1
binding_site	1
class_c	1
efficacy	1
gaba	1
induced_fit	1
inverse_agonist	1
kinase	1
kinks	1
metai	1
oligomers	1
peptide	1
priviledged_structures	1
proline	1
protein_docking	1
sequence_alignment	1
tm4	1
transducin	1
vasopressin	1

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