xdeupi's loops [14 articles] Export

Recent papers added to xdeupi's library classified by the tag loops. You can also see everyone's loops.

	G protein-coupled receptors show unusual patterns of intrinsic unfolding [My Copy] Protein Engineering, Design and Selection, Vol. 18, No. 2. (February 2005), pp. 103-110. by Veli-Pekka Jaakola, Jaime Prilusky, Joel L. Sussman, Adrian Goldman posted to cterm disorder dynamics flexibility folding icl3 loops modeling structure by xdeupi on 2009-03-27 09:41:46 as
	Investigation of transmembrane proteins using a computational approach. [My Copy] BMC genomics, Vol. 9 Suppl 1 (2008) by J. Y. Yang, M. Q. Yang, A. K. Dunker, Y. Deng, X. Huang posted to disorder gpcr loops membrane_proteins structure theory transmembrane by xdeupi on 2008-10-20 22:23:57 as
	Critical Role for the Second Extracellular Loop in the Binding of Both Orthosteric and Allosteric G Protein-coupled Receptor Ligands [My Copy] J. Biol. Chem., Vol. 282, No. 35. (31 August 2007), pp. 25677-25686. by Vimesh A. Avlani, Karen J. Gregory, Craig J. Morton, Michael W. Parker, Patrick M. Sexton, Arthur Christopoulos posted to activation binding ecl2 ligands loops structure by xdeupi on 2007-06-29 21:12:42 as along with 1 group LabCompMed
	Multiple residues in the second extracellular loop are critical for M3 muscarinic acetylcholine receptor activation. [My Copy] J Biol Chem, Vol. 282, No. 10. (9 March 2007), pp. 7385-7396. by M. Scarselli, B. Li, S. K. Kim, J. Wess posted to activation amine binding ecl2 loops mutation by xdeupi on 2007-04-23 10:28:29 as along with 1 person and 1 group IrinaMoreira LabCompMed
	Peptide design and structural characterization of a GPCR loop mimetic. [My Copy] Biopolymers (18 April 2007) by Truc-Chi T C. Pham, Richard W W. Kriwacki, Abby L L. Parrill posted to gpcr loops modeling structure by xdeupi on 2007-04-23 10:24:23 as along with 1 group LabCompMed
	Systematic analysis of the entire second extracellular loop of the V1a vasopressin receptor: Key residues, conserved throughout a G-protein-coupled receptor family, identified. [My Copy] J Biol Chem (2 April 2007) by Matthew Conner, Stuart R R. Hawtin, John Simms, et al.Denise L L. Wootten, Zoe Lawson, Alex C C. Conner, Rosemary A A. Parslow, Mark Wheatley posted to activation amine binding ecl2 gpcr loops by xdeupi on 2007-04-10 18:59:06 as along with 1 group LabCompMed
	The first extracellular loop of the Saccharomyces cerevisiae GPCR STE2P undergoes a conformational change upon ligand binding. [My Copy] J Biol Chem (9 February 2007) by Melinda Hauser, Sarah Kauffman, Byung-Kwon K. Lee, Fred Naider, Jeffrey M M. Becker posted to activation binding gpcr loops by xdeupi on 2007-02-20 10:09:06 as along with 1 group LabCompMed
	A structure-based simulation approach for electron paramagnetic resonance spectra using molecular and stochastic dynamics simulations. [My Copy] Biophys J, Vol. 91, No. 7. (1 October 2006), pp. 2647-2664. by C. Beier, H. J. Steinhoff posted to dynamics loops md modeling spin_labeling structure by xdeupi on 2006-10-30 18:37:07 as along with 1 group LabCompMed
	dummy [My Copy] by Dummy posted to 5ht1a activation agonist amber amine arrestin b2ar bimane binding cam ccr5 channel chemokine chimera crystallography cterm cxcr1 d250 dimer disease drug dry dynamics ecl2 evolution expression fluorescence folding fret genome gly gpcr gproteins hbond helix helix8 histamine hormone icl3 imaging internalization ionic leukotriene lhr ligands lipids lock loops md membrane modeling mutation n745 n749 nmr npxxy nterm opioid pharmacology polymorphism pro-kink protonation review rhodopsin s542 sequence ser spin_labeling structure switch thr thyrotropin tm2 tm3 tm5 tm6 tm7 toggle transmembrane trp txp w648 by xdeupi on 2006-10-30 12:30:16 as along with 2 people and 1 group jessicaopacic ivanrt LabCompMed
	ZPRED: Predicting the distance to the membrane center for residues in alpha-helical membrane proteins. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by E. Granseth, H. Viklund, A. Elofsson posted to helix loops membrane modeling structure transmembrane by xdeupi on 2006-09-05 10:16:39 as along with 2 people and 1 group thaliana chrn LabCompMed
	Genetic analysis of the first and third extracellular loops of the C5a receptor reveals an essential WxFG motif in the first loop. [My Copy] J Biol Chem (27 February 2006) by Jeffery M M. Klco, Gregory V V. Nikiforovich, Thomas J J. Baranski posted to activation gpcr loops by xdeupi on 2006-03-06 10:13:22 as along with 1 group LabCompMed
	The role of extra-membranous inter-helical loops in helix-helix interactions. [My Copy] Protein Eng Des Sel, Vol. 18, No. 12. (December 2005), pp. 563-570. by M. B. Ulmschneider, D. P. Tieleman, M. S. Sansom posted to dynamics helix loops md membrane transmembrane by xdeupi on 2006-03-06 09:46:32 as along with 2 people and 1 group thaliana allanlo LabCompMed
	Dissecting the energetics of protein [alpha]-helix C-cap termination through chemical protein synthesis [My Copy] Nat Chem Biol, Vol. 2, No. 3. (March 2006), pp. 139-143. by Duhee Bang, Alexey V. Gribenko, Valentina Tereshko, Anthony A. Kossiakoff, Stephen B. Kent, George Makhatadze posted to gly helix loops structure by xdeupi on 2006-02-24 11:19:23 as along with 1 group LabCompMed
	The binding site of aminergic G protein-coupled receptors: the transmembrane segments and second extracellular loop. [My Copy] Annu Rev Pharmacol Toxicol, Vol. 42 (2002), pp. 437-467. by L. Shi, J. A. Javitch posted to agonist binding ecl2 gpcr helix loops transmembrane by xdeupi on 2005-11-01 01:00:19 as along with 1 person and 1 group IrinaMoreira LabCompMed

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activation	173
gpcr	112
structure	89
rhodopsin	79
review	65
modeling	62
b2ar	58
dynamics	56
helix	50
transmembrane	47
agonist	46
binding	45
theory	44
ligands	41
drug	36
md	35
switch	34
membrane_proteins	31
pharmacology	31
crystallography	30
nmr	30
membrane	26
gproteins	24
dimer	20
fluorescence	18
sequence	17
ser	17
active-state	15
pro-kink	15
folding	14
fret	14
genome	14
loops	14
flexibility	13
disease	12
tm6	12
cterm	11
mutation	11
retinal	11
amber	10
energy_landscape	10
evolution	10
toggle	10
arrestin	9
docking	9
kinetics	9
lipids	9
neurokinin	9
tm5	9
chemokine	8
gpcrs	8
hbond	8
helix8	8
imaging	8
bimane	7
cancer	7
channel	7
ecl2	7
gly	7
icl3	7
ionic	7
lmc_101	7
plasticity	7
protonation	7
tm3	7
w648	7
cation-pi	6
ccr5	6
conformational_changes	6
cys_scanning	6
d250	6
internalization	6
npxxy	6
opioid	6
thyrotropin	6
tm2	6
xray	6
amine	5
binding_kinetics	5
dimerization	5
dry	5
expression	5
lock	5
polymorphism	5
spectroscopy	5
thr	5
trp	5
angiotensin	4
antagonist	4
biased_agonism	4
cam	4
cholesterol	4
disorder	4
hormone	4
n749	4
nterm	4
pathway	4
tm7	4
water	4
cxcr1	3
grk	3
histamine	3
n745	3
oligomerization	3
spin_labeling	3
toac	3
webserver	3
5ht1a	2
chimera	2
crosslinking	2
em	2
leukotriene	2
lhr	2
networks	2
pathways	2
phylogeny	2
s542	2
solvation	2
tm1	2
tmhs	2
txp	2
b1ar	1
binding_site	1
class_c	1
efficacy	1
gaba	1
induced_fit	1
inverse_agonist	1
kinase	1
kinks	1
metai	1
oligomers	1
peptide	1
priviledged_structures	1
protein_docking	1
selectivity	1
sequence_alignment	1
tm4	1
transducin	1
vasopressin	1

xdeupi's loops [14 articles] Export

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