xdeupi's review [64 articles] Export

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	A G protein-coupled receptor at work: the rhodopsin model. [My Copy] Trends in biochemical sciences, Vol. 34, No. 11. (15 November 2009), pp. 540-552. by Klaus Peter P. Hofmann, Patrick Scheerer, Peter W. Hildebrand, et al.Hui-Woog W. Choe, Jung Hee H. Park, Martin Heck, Oliver P. Ernst posted to rhodopsin review gpcr activation by xdeupi on 2009-11-09 14:10:06 as along with 1 person lymxz
	Visual pigment: G-protein-coupled receptor for light signals [My Copy] Cellular and Molecular Life Sciences, Vol. 54, No. 12. (19 December 1998), pp. 1299-1315. by Y. Shichida, H. Imai posted to rhodopsin review pathway energy_landscape activation by xdeupi on 2009-10-29 11:43:58 as
	Long-timescale molecular dynamics simulations of protein structure and function. [My Copy] Current opinion in structural biology, Vol. 19, No. 2. (08 April 2009), pp. 120-127. by John L. Klepeis, Kresten Lindorff-Larsen, Ron O. Dror, David E. Shaw posted to review md by xdeupi on 2009-10-08 11:13:56 as along with 11 people and 1 group agrossfield allmensch bmduggan r2s2 apaydin kiekyon Borelli idoerg sobolevnrm edws paulschlesinger baker-group
	Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models. [My Copy] PloS one, Vol. 4, No. 9. (2009) by Catherine L. Worth, Gunnar Kleinau, Gerd Krause posted to structure sequence review modeling gpcr by xdeupi on 2009-10-06 19:24:07 as
	Conserved waters mediate structural and functional activation of family A (rhodopsin-like) G protein-coupled receptors. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 21. (26 May 2009), pp. 8555-8560. by Thomas E. Angel, Mark R. Chance, Krzysztof Palczewski posted to water structure review gpcr activation by xdeupi on 2009-10-06 18:17:17 as along with 1 person agrossfield
	Homology modeling of GPCRs. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 552 (2009), pp. 97-113. by John Simms, Nathan E. Hall, Polo H. Lam, et al.Laurence J. Miller, Arthur Christopoulos, Ruben Abagyan, Patrick M. Sexton posted to theory review modeling gpcr by xdeupi on 2009-10-06 18:14:40 as
	Building a new conceptual framework for receptor heteromers. [My Copy] Nature chemical biology, Vol. 5, No. 3. (March 2009), pp. 131-134. by Sergi Ferré, Ruben Baler, Michel Bouvier, et al.Marc G. Caron, Lakshmi A. Devi, Thierry Durroux, Kjell Fuxe, Susan R. George, Jonathan A. Javitch, Martin J. Lohse, Ken Mackie, Graeme Milligan, Kevin D. Pfleger, Jean-Philippe P. Pin, Nora D. Volkow, Maria Waldhoer, Amina S. Woods, Rafael Franco posted to review dimerization by xdeupi on 2009-10-06 18:10:13 as along with 1 person sschurer
	Comparative analysis of GPCR crystal structures. [My Copy] Photochemistry and photobiology, Vol. 85, No. 2. (r 2009), pp. 425-430. by David T. Lodowski, Thomas E. Angel, Krzysztof Palczewski posted to structure review gpcr by xdeupi on 2009-10-06 18:07:41 as
	Vertebrate membrane proteins: structure, function, and insights from biophysical approaches. [My Copy] Pharmacological reviews, Vol. 60, No. 1. (1 March 2008), pp. 43-78. by Daniel J. Müller, Nan Wu, Krzysztof Palczewski posted to review membrane_proteins membrane by xdeupi on 2009-10-05 19:27:45 as along with 1 person sebk
	Conformational changes involved in G-protein-coupled-receptor activation [My Copy] Trends in Pharmacological Sciences, Vol. 29, No. 12. (December 2008), pp. 616-625. by J. Wess, S. Han, S. Kim, K. Jacobson, J. Li posted to review gpcrs conformational_changes activation by xdeupi on 2009-10-05 19:02:41 as
	The energy landscapes and motions of proteins. [My Copy] Science (New York, N.Y.), Vol. 254, No. 5038. (13 December 1991), pp. 1598-1603. by H. Frauenfelder, S. G. Sligar, P. G. Wolynes posted to theory review plasticity kinetics flexibility energy_landscape dynamics active-state activation by xdeupi on 2009-08-31 15:05:33 as along with 3 people FilipeMaia naitsabes kjell
	Understanding the Ligand-Receptor-G Protein Ternary Complex for GPCR Drug Discovery. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 552 (2009), pp. 67-77. by V. R. Ratnala, B. Kobilka posted to activation gpcr review by xdeupi on 2009-06-25 16:46:39 as
	G-protein-coupled receptor structures were not built in a day [My Copy] Protein Science, Vol. 18, No. 7. (20 May 2009), pp. 1335-1342. by Tracy M. Blois, James U. Bowie posted to gpcrs review structure by xdeupi on 2009-06-25 16:34:38 as along with 2 people and 1 group lees arnaucordomi Orengo Group Journal Picks
	X-ray structure breakthroughs in the GPCR transmembrane region. [My Copy] Biochemical pharmacology, Vol. 78, No. 1. (1 July 2009), pp. 11-20. by Sid Topiol, Michael Sabio posted to gpcr review structure by xdeupi on 2009-06-09 15:41:31 as along with 1 person diod
	The structure and function of G-protein-coupled receptors [My Copy] Nature, Vol. 459, No. 7245. (20 May 2009), pp. 356-363. by Daniel M. Rosenbaum, Soren G. F. Rasmussen, Brian K. Kobilka posted to gpcr review by xdeupi on 2009-06-09 15:38:24 as along with 8 people diod guhjy viktor21614 agrossfield patricia akundaje hsekiguc barry
	Conformational changes in G-protein-coupled receptors-the quest for functionally selective conformations is open. [My Copy] British journal of pharmacology, Vol. 153 Suppl 1 (3 March 2008) by C. Hoffmann, A. Zürn, M. Bünemann, M. J. Lohse posted to gpcrs review by xdeupi on 2009-05-26 08:41:58 as along with 2 people and 1 group anna_yershova Fritz neurolit
	Dynamic personalities of proteins [My Copy] Nature, Vol. 450, No. 7172. (12 December 2007), pp. 964-972. by Katherine Henzler-Wildman, Dorothee Kern posted to activation dynamics nmr review by xdeupi on 2009-03-12 12:06:38 as along with 17 people and 1 group Diego_Prada viktor21614 ruvido barry pavanghatty chad_davis allmensch choonpeng rsantana cjeans sobolevnrm wilbur mijam kjell phoenixzxl higueruelo GeeSharpMinor baker-group
	Automation of NMR structure determination of proteins. [My Copy] Curr Opin Struct Biol, Vol. 14, No. 5. (October 2004), pp. 547-553. by A. S. Altieri, R. A. Byrd posted to dynamics nmr review structure by xdeupi on 2009-03-10 15:30:11 as along with 2 people kumar_physics apaydin
	New Tools Provide New Insights in NMR Studies of Protein Dynamics [My Copy] Science, Vol. 312, No. 5771. (14 April 2006), pp. 224-228. by Anthony Mittermaier, Lewis E. Kay posted to activation dynamics nmr review by xdeupi on 2009-03-10 14:43:09 as along with 5 people bmduggan apaydin lna aqeel laurabailey
	Topology of class A G protein-coupled receptors: insights gained from crystal structures of rhodopsins, adrenergic and adenosine receptors. [My Copy] Molecular pharmacology, Vol. 75, No. 1. (January 2009), pp. 1-12. by D. Mustafi, K. Palczewski posted to gpcr review by xdeupi on 2009-01-28 09:51:43 as along with 1 person merj
	Roles of G-protein-coupled receptor signaling in cancer biology and gene transcription. [My Copy] Curr Opin Genet Dev, Vol. 17, No. 1. (February 2007), pp. 40-44. by B. D. Spiegelberg, H. E. Hamm posted to cancer gpcr review by xdeupi on 2009-01-12 16:01:17 as along with 1 person guhjy
	G protein-coupled receptors and their signaling pathways: classical therapeutical targets susceptible to novel therapeutic concepts. [My Copy] Current pharmaceutical design, Vol. 10, No. 16. (2004), pp. 1937-1958. by C. Liebmann posted to cancer gpcr review by xdeupi on 2009-01-12 15:58:01 as
	Overexpression of G protein-coupled receptors in cancer cells: involvement in tumor progression. [My Copy] Int J Oncol, Vol. 27, No. 5. (November 2005), pp. 1329-1339. by S. Li, S. Huang, S. B. Peng posted to cancer disease expression gpcr review by xdeupi on 2009-01-12 15:56:58 as along with 1 person and 1 group isaacstone olfscience
	Physiological relevance of GPCR oligomerization and its impact on drug discovery. [My Copy] Drug discovery today, Vol. 13, No. 23-24. (14 December 2008), pp. 1059-1066. by Rosemarie Panetta, Michael T. Greenwood posted to dimer disease drug gpcr ligands pharmacology review by xdeupi on 2008-10-16 09:57:50 as along with 1 person guhjy
	Seven transmembrane receptors: a brief personal retrospective. [My Copy] Biochimica et biophysica acta, Vol. 1768, No. 4. (April 2007), pp. 748-755. by R. J. Lefkowitz posted to gpcr lmc_101 review by xdeupi on 2008-09-02 11:50:30 as along with 1 person IrinaMoreira
	Crystallizing thinking about the beta2-adrenergic receptor. [My Copy] Mol Pharmacol (31 January 2008) by Arun K K. Shukla, Jin-Peng P. Sun, Robert J J. Lefkowitz posted to b2ar crystallography gpcr review by xdeupi on 2008-05-13 16:09:07 as along with 3 people agrossfield tkershaw merj
	Clinical consequences of ADR2 polymorphisms [My Copy] Pharmacogenomics, Vol. 9, No. 3. (March 2008), pp. 349-358. by Hawkins, A. Gregory, Weiss, T. Scott, Bleecker, R. Eugene posted to b2ar disease drug genome pharmacology polymorphism review by xdeupi on 2008-05-03 17:12:39 as
	Functional assays as prismatic views of drug activity: relevance to new drug discovery. [My Copy] Journal of receptor and signal transduction research, Vol. 28, No. 1. (2008), pp. 109-125. by T. Kenakin posted to biased_agonism chemokine drug pharmacology review by xdeupi on 2008-05-03 17:03:08 as
	Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions. [My Copy] Q Rev Biophys, Vol. 37, No. 2. (May 2004), pp. 121-146. by U. Lehnert, Y. Xia, T. E. Royce, et al.C. S. Goh, Y. Liu, A. Senes, H. Yu, Z. L. Zhang, D. M. Engelman, M. Gerstein posted to membrane_proteins review structure theory transmembrane by xdeupi on 2008-05-01 19:11:17 as along with 1 person thaliana
	Retinylidene proteins: structures and functions from archaea to humans. [My Copy] Annual review of cell and developmental biology, Vol. 16 (2000), pp. 365-392. by J. L. Spudich, C. S. Yang, K. H. Jung, E. N. Spudich posted to retinal review rhodopsin structure by xdeupi on 2008-04-08 11:33:18 as along with 1 group LabCompMed
	Crystal structure of rhodopsin: implications for vision and beyond. [My Copy] Current opinion in structural biology, Vol. 11, No. 4. (August 2001), pp. 420-426. by T. Okada, K. Palczewski posted to retinal review rhodopsin structure by xdeupi on 2008-04-08 11:29:02 as along with 1 group LabCompMed
	Chemistry. Following the flow of energy in biomolecules. [My Copy] Science, Vol. 310, No. 5750. (11 November 2005), pp. 980-982. by P. M. Champion posted to activation retinal review rhodopsin by xdeupi on 2007-07-30 17:02:29 as along with 1 group LabCompMed
	Formation of Transmembrane Helices In Vivo--Is Hydrophobicity All that Matters? [My Copy] J. Gen. Physiol., Vol. 129, No. 5. (30 April 2007), pp. 353-356. by Gunnar von Heijne posted to helix membrane_proteins review structure transmembrane by xdeupi on 2007-06-29 21:20:58 as along with 2 people and 1 group hc5428 thaliana LabCompMed
	G-protein-coupled receptor signalling through protein networks. [My Copy] Biochem Soc Trans, Vol. 35, No. Pt 1. (February 2007), pp. 23-27. by A. D. Strosberg, C. Nahmias posted to b2ar gpcr pharmacology review structure by xdeupi on 2007-06-29 21:10:57 as along with 1 group LabCompMed
	The membrane protein universe: what's out there and why bother? [My Copy] Journal of Internal Medicine, Vol. 261, No. 6. (June 2007), pp. 543-557. by Von Heijne, G. posted to lmc_101 membrane_proteins review by xdeupi on 2007-06-11 10:28:32 as along with 2 people and 1 group guhjy andreasauerwein LabCompMed
	Constitutive activity and inverse agonism at the alpha1adrenoceptors. [My Copy] Biochem Pharmacol, Vol. 73, No. 8. (15 April 2007), pp. 1076-1083. by S. Cotecchia posted to activation gpcr review by xdeupi on 2007-06-02 19:31:15 as along with 1 group LabCompMed
	Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base [My Copy] BMC Bioinformatics, Vol. 8 (30 May 2007), 177. by Lucy Skrabanek, Marta Murcia, Michel Bouvier, et al.Lakshmi Devi, Susan R. George, Martin J. Lohse, Graeme Milligan, Richard Neubig, Krzysztof Palczewski, Marc Parmentier, Jean-Philippe Pin, Gerrit Vriend, Jonathan A. Javitch, Fabien Campagne, Marta Filizola posted to dimer gpcr review by xdeupi on 2007-06-02 19:25:57 as along with 1 group LabCompMed
	Structure-function of alpha1-adrenergic receptors. [My Copy] Biochemical pharmacology, Vol. 73, No. 8. (15 April 2007), pp. 1051-1062. by Dianne M. Perez posted to activation gpcr review by xdeupi on 2007-06-02 19:21:05 as along with 1 person and 1 group diod LabCompMed
	G protein coupled receptor structure and activation. [My Copy] Biochim Biophys Acta, Vol. 1768, No. 4. (April 2007), pp. 794-807. by B. K. Kobilka posted to activation b2ar gpcr lmc_101 review switch by xdeupi on 2007-06-02 19:19:32 as along with 4 people and 2 groups guhjy Fritz merj adamsdi neurolit LabCompMed
	Determining membrane protein structures: still a challenge! [My Copy] Trends Biochem Sci (2 May 2007) by Jean-Jacques J. Lacapère, Eva Pebay-Peyroula, Jean-Michel M. Neumann, Catherine Etchebest posted to crystallography dynamics membrane_proteins nmr review structure by xdeupi on 2007-05-15 12:52:21 as along with 1 person and 1 group gcaltabiano LabCompMed
	The tachykinin tale: molecular recognition in a historical perspective. [My Copy] J Mol Recognit (20 April 2007) by Thomas Werge posted to gpcr neurokinin review by xdeupi on 2007-05-02 09:00:00 as along with 1 group LabCompMed
	Multiple signaling states of G-protein-coupled receptors. [My Copy] Pharmacol Rev, Vol. 57, No. 2. (June 2005), pp. 147-161. by D. M. Perez, S. S. Karnik posted to activation agonist gpcr pharmacology review rhodopsin switch by xdeupi on 2007-04-26 14:57:25 as along with 1 group LabCompMed
	Chemical Biology & Drug Design: First Anniversary - 2007! [My Copy] Chem Biol Drug Des, Vol. 69, No. 1. (January 2007), pp. 1-2. by Tomi K K. Sawyer posted to drug pharmacology review by xdeupi on 2007-04-23 16:56:17 as along with 1 group LabCompMed
	Pharmacogenomic and structural analysis of constitutive g protein-coupled receptor activity. [My Copy] Annu Rev Pharmacol Toxicol, Vol. 47 (2007), pp. 53-87. by M. J. Smit, H. F. Vischer, R. A. Bakker, et al.A. Jongejan, H. Timmerman, L. Pardo, R. Leurs posted to activation disease gpcr modeling review structure switch by xdeupi on 2007-04-17 12:35:15 as along with 1 group LabCompMed
	Heterologous GPCR Expression: A Bottleneck to Obtaining Crystal Structures. [My Copy] Biotechnol Prog (31 March 2007) by Emily C. McCusker, Steven E. Bane, Michelle A. O'malley, Anne S. Robinson posted to crystallography gpcr review by xdeupi on 2007-04-10 19:18:56 as along with 1 person and 1 group merj LabCompMed
	Inactive and active states and supramolecular organization of GPCRs: insights from computational modeling. [My Copy] J Comput Aided Mol Des, Vol. 20, No. 7-8. (g 2006), pp. 449-461. by F. Fanelli, P. G. De Benedetti posted to gpcr modeling review by xdeupi on 2007-03-26 10:31:45 as along with 1 group LabCompMed
	Setting up and running molecular dynamics simulations of membrane proteins. [My Copy] Methods (San Diego, Calif.), Vol. 41, No. 4. (April 2007), pp. 475-488. by Christian Kandt, Walter L. Ash, D. Peter Tieleman posted to dynamics md membrane modeling review transmembrane by xdeupi on 2007-03-26 10:15:17 as along with 3 people and 2 groups arnaucordomi choonpeng sobolevnrm LabCompMed baker-group
	Subclassification and nomenclature of alpha- and beta-adrenoceptors. [My Copy] Curr Top Med Chem, Vol. 7, No. 2. (2007), pp. 129-134. by J. P. Hieble posted to agonist b2ar drug genome ligands pharmacology review by xdeupi on 2007-03-12 14:33:19 as along with 1 group LabCompMed
	International Union of Basic and Clinical Pharmacology. LXVII. Recommendations for the Recognition and Nomenclature of G Protein-Coupled Receptor Heteromultimers. [My Copy] Pharmacol Rev, Vol. 59, No. 1. (March 2007), pp. 5-13. by J. P. Pin, R. Neubig, M. Bouvier, et al.L. Devi, M. Filizola, J. A. Javitch, M. J. Lohse, G. Milligan, K. Palczewski, M. Parmentier, M. Spedding posted to dimer gpcr review by xdeupi on 2007-03-12 14:26:45 as along with 1 group LabCompMed
	From Interactions of Single Transmembrane Helices to Folding of alpha-Helical Membrane Proteins: Analyzing Transmembrane Helix-Helix Interactions in Bacteria. [My Copy] Curr Protein Pept Sci, Vol. 8, No. 1. (February 20067), pp. 45-61. by Dirk Schneider, Carmen Finger, Alexander Prodöhl, Thomas Volkmer posted to helix membrane_proteins review sequence structure transmembrane by xdeupi on 2007-02-26 09:06:23 as along with 1 group LabCompMed

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activation	172
gpcr	110
structure	89
rhodopsin	79
review	64
modeling	62
b2ar	58
dynamics	56
helix	50
transmembrane	47
agonist	46
binding	44
theory	43
ligands	41
drug	36
md	35
switch	34
membrane_proteins	31
crystallography	30
nmr	30
pharmacology	30
membrane	26
gproteins	23
dimer	20
fluorescence	18
sequence	17
ser	17
active-state	15
folding	14
fret	14
genome	14
loops	14
pro-kink	14
flexibility	13
disease	12
tm6	12
cterm	11
mutation	11
retinal	11
amber	10
energy_landscape	10
evolution	10
toggle	10
docking	9
kinetics	9
lipids	9
neurokinin	9
tm5	9
arrestin	8
chemokine	8
gpcrs	8
hbond	8
helix8	8
imaging	8
bimane	7
cancer	7
channel	7
ecl2	7
gly	7
icl3	7
ionic	7
lmc_101	7
plasticity	7
protonation	7
tm3	7
w648	7
cation-pi	6
ccr5	6
cys_scanning	6
d250	6
internalization	6
npxxy	6
opioid	6
thyrotropin	6
tm2	6
xray	6
amine	5
binding_kinetics	5
conformational_changes	5
dimerization	5
dry	5
expression	5
lock	5
polymorphism	5
spectroscopy	5
thr	5
trp	5
antagonist	4
cam	4
cholesterol	4
disorder	4
hormone	4
n749	4
nterm	4
pathway	4
tm7	4
water	4
angiotensin	3
biased_agonism	3
cxcr1	3
grk	3
histamine	3
n745	3
oligomerization	3
spin_labeling	3
toac	3
webserver	3
5ht1a	2
chimera	2
crosslinking	2
em	2
leukotriene	2
lhr	2
networks	2
pathways	2
phylogeny	2
s542	2
solvation	2
tm1	2
tmhs	2
txp	2
b1ar	1
binding_site	1
class_c	1
efficacy	1
gaba	1
induced_fit	1
inverse_agonist	1
kinase	1
kinks	1
metai	1
oligomers	1
peptide	1
priviledged_structures	1
proline	1
protein_docking	1
sequence_alignment	1
tm4	1
transducin	1
vasopressin	1

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