Multiple sequence alignment with the Clustal series of programs.

by: R Chenna, H Sugawara, T Koike, R Lopez, TJ Gibson, DG Higgins, JD Thompson

Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3497-3500.

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Abstract

The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the robustness, portability and user-friendliness of the programs. New features include NEXUS and FASTA format output, printing range numbers and faster tree calculation. Although, Clustal was originally developed to run on a local computer, numerous Web servers have been set up, notably at the EBI (European Bioinformatics Institute) (http://www.ebi.ac.uk/clustalw/).

@article{citeulike:246558, abstract = {The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the robustness, portability and user-friendliness of the programs. New features include NEXUS and FASTA format output, printing range numbers and faster tree calculation. Although, Clustal was originally developed to run on a local computer, numerous Web servers have been set up, notably at the EBI (European Bioinformatics Institute) (http://www.ebi.ac.uk/clustalw/).}, address = {European Molecular Biology Laboratory, Meyerhofstrasse 1, D-69117 Heidelberg, Germany.}, author = {Chenna, R. and Sugawara, H. and Koike, T. and Lopez, R. and Gibson, T. J. and Higgins, D. G. and Thompson, J. D. }, citeulike-article-id = {246558}, issn = {1362-4962}, journal = {Nucleic Acids Res}, keywords = {alignment, bioinformatics}, month = {July}, number = {13}, pages = {3497--3500}, posted-at = {2008-03-18 19:10:59}, priority = {2}, title = {Multiple sequence alignment with the Clustal series of programs.}, url = {http://nar.oxfordjournals.org/cgi/content/abstract/31/13/3497}, volume = {31}, year = {2003} }

RIS record

TY - JOUR ID - citeulike:246558 L3 - citeulike-article-id:246558 TI - Multiple sequence alignment with the Clustal series of programs. JF - Nucleic Acids Res VL - 31 IS - 13 SP - 3497 EP - 3500 AD - European Molecular Biology Laboratory, Meyerhofstrasse 1, D-69117 Heidelberg, Germany. SN - 1362-4962 N2 - The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the robustness, portability and user-friendliness of the programs. New features include NEXUS and FASTA format output, printing range numbers and faster tree calculation. Although, Clustal was originally developed to run on a local computer, numerous Web servers have been set up, notably at the EBI (European Bioinformatics Institute) (http://www.ebi.ac.uk/clustalw/). KW - alignment KW - bioinformatics AU - Chenna, R AU - Sugawara, H AU - Koike, T AU - Lopez, R AU - Gibson, TJ AU - Higgins, DG AU - Thompson, JD PY - 2003/07/01/ UR - http://nar.oxfordjournals.org/cgi/content/abstract/31/13/3497 ER -

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