xwbcn's microarray [32 articles] Export

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	Single feature polymorphisms between two rice cultivars detected using a median polish method [My Copy] TAG Theoretical and Applied Genetics by Weibo Xie, Ying Chen, Gang Zhou, et al.Lei Wang, Chengjun Zhang, Jianwei Zhang, Jinghua Xiao, Tong Zhu, Qifa Zhang posted to genome median_polish method microarray rice sfp by xwbcn on 2009-05-30 15:50:15 as
	Iterative Group Analysis (iGA): A simple tool to enhance sensitivity and facilitate interpretation of microarray experiments [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (2004) by Rainer Breitling, Anna Amtmann, Pawel Herzyk posted to method microarray rank_based by xwbcn on 2009-02-19 12:29:37 as along with 1 person ndiaz
	Decoding randomly ordered DNA arrays. [My Copy] Genome research, Vol. 14, No. 5. (May 2004), pp. 870-877. by Kevin L. Gunderson, Semyon Kruglyak, Michael S. Graige, et al.Francisco Garcia, Bahram G. Kermani, Chanfeng Zhao, Diping Che, Todd Dickinson, Eliza Wickham, Jim Bierle, Dennis Doucet, Monika Milewski, Robert Yang, Chris Siegmund, Juergen Haas, Lixin Zhou, Arnold Oliphant, Jian-Bing B. Fan, Steven Barnard, Mark S. Chee posted to illumina microarray platform by xwbcn on 2008-10-23 04:32:08 as along with 5 people and 2 groups dswan daforerog ptrobajo rschulz jeremymiller Bioinformatics GeschwindLab
	Cross-species comparison of gene expression between human and porcine tissue, using single microarray platform--preliminary results. [My Copy] Clinical transplantation, Vol. 18 Suppl 12 (2004), pp. 76-80. by G. Shah, M. Azizian, D. Bruch, R. Mehta, D. Kittur posted to arabidopsis microarray plants by xwbcn on 2008-08-22 10:07:26 as
	Consensus by democracy. Using meta-analyses of microarray and genomic data to model the cold acclimation signaling pathway in Arabidopsis. [My Copy] Plant Physiol, Vol. 141, No. 4. (August 2006), pp. 1219-1232. by C. Benedict, M. Geisler, J. Trygg, N. Huner, V. Hurry posted to arabidopsis chip cold comparative_study data_mining expression genome microarray motif networks transcriptome by xwbcn on 2007-06-11 15:16:05 as along with 1 person natstreet
	Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis [My Copy] Genome Biology, Vol. 8 (11 January 2007), R7. by Rodrigo A. Gutierrez, Laurence Lejay, Alexis Dean, Francesca Chiaromonte, Dennis E. Shasha, Gloria M. Coruzzi posted to arabidopsis chip comparative_study expression gene_ontology genome microarray networks transcriptome by xwbcn on 2007-03-24 08:24:08 as along with 3 people and 1 group kengg joseph_x_zhou natstreet bioNetwork_sysBio
	Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset. [My Copy] Genome Biol, Vol. 6, No. 2. (2005) by S. E. Choe, M. Boutros, A. M. Michelson, G. M. Church, M. S. Halfon posted to chip comparative_study method microarray by xwbcn on 2007-02-26 15:21:39 as along with 8 people and 1 group bertelsen lwaldron heliopais jeremymiller ccr ghattem waszak daforerog GeschwindLab
	Tissue-driven hypothesis of genomic evolution and sequence-expression correlations [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 8. (20 February 2007), pp. 2779-2784. by Xun Gu, Zhixi Su posted to evolution expression gene_family genome microarray by xwbcn on 2007-02-25 15:03:41 as along with 7 people aktas jeremymiller gpalidwor shigepong cjeans ghattem balicea
	Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data [My Copy] BMC Bioinformatics, Vol. 7 (04 July 2006), 330. by Seon-Young Kim, Yongsung Kim posted to tf promoter microarray mammal human_genome genome expression chip by xwbcn on 2007-01-13 04:28:37 as along with 3 people heliopais jfr Ao_Li2007
	Large-scale Cis-element Detection by Analysis of Correlated Expression and Sequence Conservation between Arabidopsis and Brassica oleracea. [My Copy] Plant Physiol (6 October 2006) by Georg Haberer, Michael T T. Mader, Peter Kosarev, Manuel Spannagl, Li Yang, Klaus Fx F. Mayer posted to arabidopsis chip comparative_study genome microarray motif promoter by xwbcn on 2006-10-13 02:53:11 as along with 4 people and 1 group dpollard kengg nklee xili03 EisenLab
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to chip data_mining human microarray pathway by xwbcn on 2006-08-16 10:28:45 as along with 44 people and 4 groups miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
	Gametophytic selection in Arabidopsis thaliana supports the selective model of intron length reduction. [My Copy] PLoS Genet, Vol. 1, No. 2. (August 2005) by C. Seoighe, C. Gehring, L. D. Hurst posted to arabidopsis chip expression flowering intron microarray pollen by xwbcn on 2006-08-01 13:47:09 as along with 1 person bpcusack
	A gene expression map of Arabidopsis thaliana development [My Copy] Nature Genetics, Vol. 37, No. 5. (03 April 2005), pp. 501-506. by Markus Schmid, Timothy S. Davison, Stefan R. Henz, et al.Utz J. Pape, Monika Demar, Martin Vingron, Bernhard Schölkopf, Detlef Weigel, Jan U. Lohmann posted to arabidopsis chip comparative_study microarray by xwbcn on 2006-07-06 16:16:47 as along with 5 people and 1 group dandaman Borelli scuffster natstreet p2vani Botany and Plant Sciences
	Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. [My Copy] Plant Physiol, Vol. 138, No. 2. (June 2005), pp. 744-756. by C. Pina, F. Pinto, J. A. Feijó, J. D. Becker posted to arabidopsis chip comparative_study microarray pollen by xwbcn on 2006-06-16 16:03:36 as
	Comparative analysis of the Arabidopsis pollen transcriptome. [My Copy] Plant Physiol, Vol. 132, No. 2. (June 2003), pp. 640-652. by D. Honys, D. Twell posted to arabidopsis chip comparative_study microarray by xwbcn on 2006-06-16 15:01:35 as
	High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis. [My Copy] Genome Res, Vol. 16, No. 6. (June 2006), pp. 787-795. by M. A. West, H. van Leeuwen, A. Kozik, et al.D. J. Kliebenstein, R. W. Doerge, D. A. St Clair, R. W. Michelmore posted to arabidopsis chip microarray sfp by xwbcn on 2006-06-14 07:54:19 as along with 2 people leandrogneves RMGraze
	Genome-wide analysis of spatial and temporal gene expression in rice panicle development [My Copy] The Plant Journal, Vol. 46, No. 3. (May 2006), pp. 503-511. by Ikuyo Furutani, Shin Sukegawa, Junko Kyozuka posted to chip expression flowering microarray rice by xwbcn on 2006-05-30 18:56:54 as
	Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome [My Copy] Science, Vol. 302, No. 5646. (31 October 2003), pp. 842-846. by Kayoko Yamada, Jun Lim, Joseph M. Dale, et al.Huaming Chen, Paul Shinn, Curtis J. Palm, Audrey M. Southwick, Hank C. Wu, Christopher Kim, Michelle Nguyen, Paul Pham, Rosa Cheuk, George Karlin-Newmann, Shirley X. Liu, Bao Lam, Hitomi Sakano, Troy Wu, Guixia Yu, Molly Miranda, Hong L. Quach, Matthew Tripp, Charlie H. Chang, Jeong M. Lee, Mitsue Toriumi, Marie M. Chan, Carolyn C. Tang, Courtney S. Onodera, Justine M. Deng, Kenji Akiyama, Yasser Ansari, Takahiro Arakawa, Jenny Banh, Fumika Banno, Leah Bowser, Shelise Brooks, Piero Carninci, Qimin Chao, Nathan Choy, Akiko Enju, Andrew D. Goldsmith, Mani Gurjal, Nancy F. Hansen, Yoshihide Hayashizaki, Chanda Johnson-Hopson, Vickie W. Hsuan, Kei Iida, Meagan Karnes, Shehnaz Khan, Eric Koesema, Junko Ishida, Paul X. Jiang, Ted Jones, Jun Kawai, Asako Kamiya, Cristina Meyers, Maiko Nakajima, Mari Narusaka, Motoaki Seki, Tetsuya Sakurai, Masakazu Satou, Racquel Tamse, Maria Vaysberg, Erika K. Wallender, Cecilia Wong, Yuki Yamamura, Shiaulou Yuan, Kazuo Shinozaki, Ronald W. Davis, Athanasios Theologis, Joseph R. Ecker posted to arabidopsis chip comparative_study microarray by xwbcn on 2006-05-18 03:00:13 as along with 4 people and 1 group ThomasDOtto lptolik sdinka kaspermunch Bioinformatics
	Detecting single-feature polymorphisms using oligonucleotide arrays and robustified projection pursuit. [My Copy] Bioinformatics, Vol. 21, No. 20. (15 October 2005), pp. 3852-3858. by X. Cui, J. Xu, R. Asghar, et al.P. Condamine, J. T. Svensson, S. Wanamaker, N. Stein, M. Roose, T. J. Close posted to baley microarray sfp by xwbcn on 2006-05-02 19:06:48 as along with 1 person RMGraze
	Single-feature polymorphism discovery in the barley transcriptome. [My Copy] Genome Biol, Vol. 6, No. 6. (2005) by N. Rostoks, J. O. Borevitz, P. E. Hedley, et al.J. Russell, S. Mudie, J. Morris, L. Cardle, D. F. Marshall, R. Waugh posted to maize microarray sfp by xwbcn on 2006-05-02 19:05:41 as along with 2 people RMGraze natstreet
	Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana. [My Copy] Bioinformatics, Vol. 21, No. 14. (15 July 2005), pp. 3074-3081. by W. Zhang, J. Ruan, T. H. Ho, Y. You, T. Yu, R. S. Quatrano posted to arabidopsis microarray motif by xwbcn on 2006-05-02 18:55:11 as along with 3 people yasuf imouthesmp natstreet
	Comparative profiling of the sense and antisense transcriptome of maize lines. [My Copy] Genome Biol, Vol. 7, No. 3. (2006) by J. Ma, D. J. Morrow, J. Fernandes, V. Walbot posted to maize microarray by xwbcn on 2006-05-02 18:45:13 as
	All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents. [My Copy] Proc Natl Acad Sci U S A (25 April 2006) by Ruth A A. Swanson-Wagner, Yi Jia, Rhonda Decook, Lisa A A. Borsuk, Dan Nettleton, Patrick S S. Schnable posted to heterosis microarray by xwbcn on 2006-05-02 18:34:27 as along with 1 person qfwills
	CARRIE web service: automated transcriptional regulatory network inference and interactive analysis. [My Copy] Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004) by P. M. Haverty, M. C. Frith, Z. Weng posted to database microarray motif by xwbcn on 2006-04-23 18:55:37 as along with 2 people dquest heliopais
	GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways [My Copy] Nature Genetics, Vol. 31, No. 1. (01 May 2002), pp. 19-20. by Kam D. Dahlquist, Nathan Salomonis, Karen Vranizan, Steven C. Lawlor, Bruce R. Conklin posted to gene_ontology microarray by xwbcn on 2006-04-20 04:32:02 as along with 5 people and 1 group vkwn guhjy dragonrez fisherp AlexanderPico ConklinLab
	Control of gene expression during T cell activation: alternate regulation of mRNA transcription and mRNA stability. [My Copy] BMC Genomics, Vol. 6, No. 1. (20 May 2005) by C. Cheadle, J. Fan, Y. S. Cho-Chung, et al.T. Werner, J. Ray, L. Do, M. Gorospe, K. G. Becker posted to gene_ontology human_genome microarray by xwbcn on 2006-04-20 04:01:42 as
	How much expression divergence after yeast gene duplication could be explained by regulatory motif evolution? [My Copy] Trends Genet, Vol. 20, No. 9. (September 2004), pp. 403-407. by Z. Zhang, J. Gu, X. Gu posted to comparative_study evolution microarray by xwbcn on 2006-04-11 17:06:47 as along with 2 people azazello echinotrix
	Comparative genomics: Difference of expression [My Copy] Nature, Vol. 440, No. 7081. (March 2006), pp. 161-161. by Rasmus Nielsen posted to comparative_study genome human_genome microarray by xwbcn on 2006-04-09 09:01:17 as along with 4 people and 3 groups stevanspringer dchughes echinotrix balicea FAB-lab G4ID Genetics-of-Gambling
	Predicting gene expression from sequence. [My Copy] Cell, Vol. 117, No. 2. (16 April 2004), pp. 185-198. by M. A. Beer, S. Tavazoie posted to microarray motif tf by xwbcn on 2006-04-05 03:17:26 as along with 12 people and 6 groups rsaito thegoose2 winterschlaefer tharris ana adepace nickluscombe noano koller jrest phoenixzxl klo TranscriptionalRegulationWithThermodynamicModels C. elegans / WormBase structural_bioinformatics Bioinformatics EisenLab EBI-regulation
	Identifying regulatory networks by combinatorial analysis of promoter elements [My Copy] Nature Genetics, Vol. 29, No. 2. (10 September 2001), pp. 153-159. by Yitzhak Pilpel, Priya Sudarsanam, George M. Church posted to microarray motif tf by xwbcn on 2006-04-05 03:16:44 as along with 8 people and 1 group ipark-kaist farhat imouthesmp troels_marstrand wnpx noano koller windman83 Bioinformatics
	Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. [My Copy] Proc Natl Acad Sci U S A (31 March 2006) by Ji-Young Y. Lee, Juliette Colinas, Jean Y Y. Wang, Daniel Mace, Uwe Ohler, Philip N N. Benfey posted to arabidopsis microarray mirna motif tf by xwbcn on 2006-04-05 02:16:36 as along with 3 people and 1 group megraw cdawson dlmace GIG
	Transcriptional profiling of genes responsive to abscisic acid and gibberellin in rice: phenotyping and comparative analysis between rice and Arabidopsis. [My Copy] Physiol Genomics, Vol. 17, No. 2. (13 April 2004), pp. 87-100. by J. Yazaki, Z. Shimatani, A. Hashimoto, et al.Y. Nagata, F. Fujii, K. Kojima, K. Suzuki, T. Taya, M. Tonouchi, C. Nelson, A. Nakagawa, Y. Otomo, K. Murakami, K. Matsubara, J. Kawai, P. Carninci, Y. Hayashizaki, S. Kikuchi posted to arabidopsis chip genome microarray motif rice by xwbcn on 2006-03-07 09:50:02 as

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arabidopsis	33
microarray	32
genome	27
evolution	24
rice	24
chip	20
motif	19
comparative_study	16
expression	15
human_genome	10
mitochondrial-permeability-transition	9
flowering	8
tf	8
transcriptome	8
genome_alignment	7
human	7
plants	7
co-expression	6
promoter	6
gene_family	5
heterosis	5
mirna	5
sfp	5
expression_platform	4
maize	4
mammal	4
method	4
plant	4
annotation	3
antisense	3
data_mining	3
disequilibrium_linkage	3
gene_ontology	3
networks	3
next_generation_sequencing	3
retrogene	3
sense	3
solexa	3
todo	3
yeast	3
alignment	2
allele_specific_expression	2
chip-seq	2
cold	2
interaction	2
natural_variation	2
pathway	2
pollen	2
regulation	2
tools	2
trans-regulatory	2
abiotic	1
association_mapping	1
baley	1
c	1
chip-chip	1
copy_number_varient	1
database	1
elegans	1
full-length_cdna	1
g	1
illumina	1
interactions	1
intron	1
i_totally_dont_understand	1
mads-box	1
median_polish	1
native_variation	1
networks-reconstruction	1
nutrient	1
phylogenetics	1
platform	1
polymorphism	1
primate	1
proteome	1
rank_based	1
regeneration	1
repeats	1
salicylic_acid	1
selection	1
shannon_entropy	1
starch	1
stress	1
system_biology	1
te	1
transposable_element	1
tumor	1

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