TFBS: Computational framework for transcription factor binding site analysis Export

@article{citeulike:623549, abstract = {Motivation: TFBS is a set of integrated, object-oriented Perl modules for transcription factor binding site detection and analysis. It implements objects representing specificity profile matrices, binding sites and sets thereof, pattern generators, and pattern database interfaces. The modules are interoperable with the BioPerl open source system. Availability and Supplementary Information: The module package with documentation and example scripts are available at http://forkhead.cgb.ki.se/TFBS/ Contact: Boris.Lenhard@cgb.ki.se 10.1093/bioinformatics/18.8.1135}, address = {Bioinformatics Unit, Center for Genomics and Bioinformatics, Karolinska Institutet, Stockholm, Sweden. Boris.Lenhard@cgb.ki.se}, author = {Lenhard, Boris and Wasserman, Wyeth W.}, citeulike-article-id = {623549}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/18.8.1135}, citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/18/8/1135}, citeulike-linkout-2 = {http://view.ncbi.nlm.nih.gov/pubmed/12176838}, citeulike-linkout-3 = {http://www.hubmed.org/display.cgi?uids=12176838}, day = {1}, doi = {10.1093/bioinformatics/18.8.1135}, issn = {1367-4803}, journal = {Bioinformatics}, keywords = {software, tfbs}, month = {August}, number = {8}, pages = {1135--1136}, posted-at = {2009-03-07 01:27:19}, priority = {2}, title = {TFBS: Computational framework for transcription factor binding site analysis}, url = {http://dx.doi.org/10.1093/bioinformatics/18.8.1135}, volume = {18}, year = {2002} }

TY - JOUR ID - citeulike:623549 L3 - citeulike-article-id:623549 N2 - Motivation: TFBS is a set of integrated, object-oriented Perl modules for transcription factor binding site detection and analysis. It implements objects representing specificity profile matrices, binding sites and sets thereof, pattern generators, and pattern database interfaces. The modules are interoperable with the BioPerl open source system. Availability and Supplementary Information: The module package with documentation and example scripts are available at http://forkhead.cgb.ki.se/TFBS/ Contact: Boris.Lenhard@cgb.ki.se 10.1093/bioinformatics/18.8.1135 IS - 8 JF - Bioinformatics SN - 1367-4803 AD - Bioinformatics Unit, Center for Genomics and Bioinformatics, Karolinska Institutet, Stockholm, Sweden. Boris.Lenhard@cgb.ki.se EP - 1136 TI - TFBS: Computational framework for transcription factor binding site analysis VL - 18 SP - 1135 KW - software KW - tfbs AU - Lenhard, Boris AU - Wasserman, Wyeth PY - 2002/08/01/ UR - http://dx.doi.org/10.1093/bioinformatics/18.8.1135 ER -