yevishere's library 251 articles Export

	Analysis of computational approaches for motif discovery [My Copy] Algorithms for Molecular Biology, Vol. 1, No. 1. (19 May 2006), 8. by Nan Li, Martin Tompa posted to motf by yevishere on 2009-01-14 07:38:56 as along with 11 people and 2 groups wowalz ana barry tuck chad_davis dquest lusk nklee maximilianh xi03 csdhwang structural_bioinformatics Bioinformatics
	MEME: discovering and analyzing DNA and protein sequence motifs. [My Copy] Nucleic acids research, Vol. 34, No. Web Server issue. (1 July 2006), pp. W369-373. by Timothy L. Bailey, Nadya Williams, Chris Misleh, Wilfred W. Li posted to motifs by yevishere on 2009-01-14 07:32:48 as along with 8 people stharward wowalz coldmeadow pansapiens nklee bryankr dquest isimpson
	GAPWM: A Genetic Algorithm Method for Optimizing a Position Weight Matrix. [My Copy] Bioinformatics (6 March 2007) by Leping Li, Yu Liang, Robert L L. Bass posted to motif pwm by yevishere on 2009-01-14 07:27:15 as along with 5 people and 1 group dpollard grahamc cjeans ghattem isimpson EisenLab
	Statistical Significance of quantitative PCR [My Copy] BMC Bioinformatics, Vol. 8 (20 April 2007), 131. by Yann Karlen, Alan Mcnair, Sebastien Perseguers, Christian Mazza, Nicolas Mermod posted to qpcr by yevishere on 2008-06-11 03:44:17 as along with 5 people lisa1 natstreet druvus guhjy jfr
	ZIFIBI: Prediction of DNA binding sites for zinc finger proteins. [My Copy] Biochem Biophys Res Commun (3 March 2008) by Soo Young Y. Cho, Myungguen Chung, Minyoung Park, Sungjin Park, Young Seek S. Lee posted to mining motifs by yevishere on 2008-03-24 20:57:08 as along with 2 people guhjy maximilianh
	Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions [My Copy] Genome Biology, Vol. 2, No. 2. (2001), pp. research0004.1-research0004.13. by Brian Haab, Maitreya Dunham, Patrick Brown posted to microarray pbm by yevishere on 2008-03-14 20:48:53 as
	A unified nomenclature system for the nuclear receptor superfamily. [My Copy] Cell, Vol. 97, No. 2. (16 April 1999), pp. 161-163. by posted to nuclear receptor review by yevishere on 2008-01-18 22:18:12 as
	Overview of nomenclature of nuclear receptors. [My Copy] Pharmacol Rev, Vol. 58, No. 4. (December 2006), pp. 685-704. by P. Germain, B. Staels, C. Dacquet, M. Spedding, V. Laudet posted to nuclear receptor review by yevishere on 2008-01-18 22:10:55 as
	Genome-Wide Identification of Estrogen Receptor alpha-Binding Sites in Mouse Liver [My Copy] Mol Endocrinol, Vol. 22, No. 1. (1 January 2008), pp. 10-22. by Hui Gao, Susann Falt, Albin Sandelin, Jan-Ake Gustafsson, Karin Dahlman-Wright posted to chipchip er nuclear receptor by yevishere on 2008-01-17 22:19:08 as along with 2 people tonamswish guhjy
	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. [My Copy] Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816. by ENCODE Project Consortium, Ewan Birney, John A. Stamatoyannopoulos, et al.Anindya Dutta, Roderic Guigó, Thomas R. Gingeras, Elliott H. Margulies, Zhiping Weng, Michael Snyder, Emmanouil T. Dermitzakis, Robert E. Thurman, Michael S. Kuehn, Christopher M. Taylor, Shane Neph, Christoph M. Koch, Saurabh Asthana, Ankit Malhotra, Ivan Adzhubei, Jason A. Greenbaum, Robert M. Andrews, Paul Flicek, Patrick J. Boyle, Hua Cao, Nigel P. Carter, Gayle K. Clelland, Sean Davis, Nathan Day, Pawandeep Dhami, Shane C. Dillon, Michael O. Dorschner, Heike Fiegler, Paul G. Giresi, Jeff Goldy, Michael Hawrylycz, Andrew Haydock, Richard Humbert, Keith D. James, Brett E. Johnson, Ericka M. Johnson, Tristan T. Frum, Elizabeth R. Rosenzweig, Neerja Karnani, Kirsten Lee, Gregory C. Lefebvre, Patrick A. Navas, Fidencio Neri, Stephen C. Parker, Peter J. Sabo, Richard Sandstrom, Anthony Shafer, David Vetrie, Molly Weaver, Sarah Wilcox, Man Yu, Francis S. Collins, Job Dekker, Jason D. Lieb, Thomas D. Tullius, Gregory E. Crawford, Shamil Sunyaev, William S. Noble, Ian Dunham, France Denoeud, Alexandre Reymond, Philipp Kapranov, Joel Rozowsky, Deyou Zheng, Robert Castelo, Adam Frankish, Jennifer Harrow, Srinka Ghosh, Albin Sandelin, Ivo L. Hofacker, Robert Baertsch, Damian Keefe, Sujit Dike, Jill Cheng, Heather A. Hirsch, Edward A. Sekinger, Julien Lagarde, Josep F. Abril, Atif Shahab, Christoph Flamm, Claudia Fried, Jörg Hackermüller, Jana Hertel, Manja Lindemeyer, Kristin Missal, Andrea Tanzer, Stefan Washietl, Jan Korbel, Olof Emanuelsson, Jakob S. Pedersen, Nancy Holroyd, Ruth Taylor, David Swarbreck, Nicholas Matthews, Mark C. Dickson, Daryl J. Thomas, Matthew T. Weirauch, James Gilbert, Jorg Drenkow, Ian Bell, XiaoDong Zhao, K. G. Srinivasan, Wing-Kin K. Sung, Hong Sain S. Ooi, Kuo Ping P. Chiu, Sylvain Foissac, Tyler Alioto, Michael Brent, Lior Pachter, Michael L. Tress, Alfonso Valencia, Siew Woh W. Choo, Chiou Yu Y. Choo, Catherine Ucla, Caroline Manzano, Carine Wyss, Evelyn Cheung, Taane G. Clark, James B. Brown, Madhavan Ganesh, Sandeep Patel, Hari Tammana, Jacqueline Chrast, Charlotte N. Henrichsen, Chikatoshi Kai, Jun Kawai, Ugrappa Nagalakshmi, Jiaqian Wu, Zheng Lian, Jin Lian, Peter Newburger, Xueqing Zhang, Peter Bickel, John S. Mattick, Piero Carninci, Yoshihide Hayashizaki, Sherman Weissman, Tim Hubbard, Richard M. Myers, Jane Rogers, Peter F. Stadler, Todd M. Lowe, Chia-Lin L. Wei, Yijun Ruan, Kevin Struhl, Mark Gerstein, Stylianos E. Antonarakis, Yutao Fu, Eric D. Green, Ulaş Karaöz, Adam Siepel, James Taylor, Laura A. Liefer, Kris A. Wetterstrand, Peter J. Good, Elise A. Feingold, Mark S. Guyer, Gregory M. Cooper, George Asimenos, Colin N. Dewey, Minmei Hou, Sergey Nikolaev, Juan I. Montoya-Burgos, Ari Löytynoja, Simon Whelan, Fabio Pardi, Tim Massingham, Haiyan Huang, Nancy R. Zhang, Ian Holmes, James C. Mullikin, Abel Ureta-Vidal, Benedict Paten, Michael Seringhaus, Deanna Church, Kate Rosenbloom, W. James Kent, Eric A. Stone, NISC Comparative Sequencing Program, Baylor College of Medicine Human Genome Sequencing Center, Washington University Genome Sequencing Center, Broad Institute, Children's Hospital Oakland Research Institute, Serafim Batzoglou, Nick Goldman, Ross C. Hardison, David Haussler, Webb Miller, Arend Sidow, Nathan D. Trinklein, Zhengdong D. Zhang, Leah Barrera, Rhona Stuart, David C. King, Adam Ameur, Stefan Enroth, Mark C. Bieda, Jonghwan Kim, Akshay A. Bhinge, Nan Jiang, Jun Liu, Fei Yao, Vinsensius B. Vega, Charlie W. Lee, Patrick Ng, Atif Shahab, Annie Yang, Zarmik Moqtaderi, Zhou Zhu, Xiaoqin Xu, Sharon Squazzo, Matthew J. Oberley, David Inman, Michael A. Singer, Todd A. Richmond, Kyle J. Munn, Alvaro Rada-Iglesias, Ola Wallerman, Jan Komorowski, Joanna C. Fowler, Phillippe Couttet, Alexander W. Bruce, Oliver M. Dovey, Peter D. Ellis, Cordelia F. Langford, David A. Nix, Ghia Euskirchen, Stephen Hartman, Alexander E. Urban, Peter Kraus, Sara Van Calcar, Nate Heintzman, Tae Hoon H. Kim, Kun Wang, Chunxu Qu, Gary Hon, Rosa Luna, Christopher K. Glass, M. Geoff Rosenfeld, Shelley Force F. Aldred, Sara J. Cooper, Anason Halees, Jane M. Lin, Hennady P. Shulha, Xiaoling Zhang, Mousheng Xu, Jaafar N. Haidar, Yong Yu, Yijun Ruan, Vishwanath R. Iyer, Roland D. Green, Claes Wadelius, Peggy J. Farnham, Bing Ren, Rachel A. Harte, Angie S. Hinrichs, Heather Trumbower, Hiram Clawson, Jennifer Hillman-Jackson, Ann S. Zweig, Kayla Smith, Archana Thakkapallayil, Galt Barber, Robert M. Kuhn, Donna Karolchik, Lluis Armengol, Christine P. Bird, Paul I. de Bakker, Andrew D. Kern, Nuria Lopez-Bigas, Joel D. Martin, Barbara E. Stranger, Abigail Woodroffe, Eugene Davydov, Antigone Dimas, Eduardo Eyras, Ingileif B. Hallgrímsdóttir, Julian Huppert, Michael C. Zody, Gonçalo R. Abecasis, Xavier Estivill, Gerard G. Bouffard, Xiaobin Guan, Nancy F. Hansen, Jacquelyn R. Idol, Valerie V. Maduro, Baishali Maskeri, Jennifer C. McDowell, Morgan Park, Pamela J. Thomas, Alice C. Young, Robert W. Blakesley, Donna M. Muzny, Erica Sodergren, David A. Wheeler, Kim C. Worley, Huaiyang Jiang, George M. Weinstock, Richard A. Gibbs, Tina Graves, Robert Fulton, Elaine R. Mardis, Richard K. Wilson, Michele Clamp, James Cuff, Sante Gnerre, David B. Jaffe, Jean L. Chang, Kerstin Lindblad-Toh, Eric S. Lander, Maxim Koriabine, Mikhail Nefedov, Kazutoyo Osoegawa, Yuko Yoshinaga, Baoli Zhu, Pieter J. de Jong posted to encode hnf4 motif myc taf1 tss by yevishere on 2008-01-11 00:36:27 as along with 25 people and 2 groups bartjacobse daveGerrard daforerog isimpson sharpton jessopher timhubbard scjparker polivares coela ilyashl aprasad myrtilus daed waszak guhjy jfr chad_davis kengg olympos blobbybirdman shikin fpattyn elfar eskay Bioinformatics UH - Computational Biology
	Functional conservation of Rel binding sites in drosophilid genomes [My Copy] Genome Res., Vol. 17, No. 9. (1 September 2007), pp. 1327-1335. by Richard R. Copley, Maxim Totrov, Jane Linnell, Simon Field, Jiannis Ragoussis, Irina A. Udalova posted to pbm by yevishere on 2008-01-08 21:48:23 as along with 3 people and 2 groups dpollard Stew cisevol EisenLab cis-regulatory-evolution
	Position dependencies in transcription factor binding sites. [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 933-941. by A. Tomovic, E. J. Oakeley posted to mining motifs by yevishere on 2008-01-08 00:29:53 as along with 2 people aalibes nklee
	Evolution of transcription factor DNA binding sites. [My Copy] Gene, Vol. 347, No. 2. (14 March 2005), pp. 255-263. by E. A. Kotelnikova, V. J. Makeev, M. S. Gelfand posted to mining motifs tool by yevishere on 2008-01-08 00:28:18 as along with 4 people and 1 group balajis gpalidwor nklee cisevol cis-regulatory-evolution
	A survey of DNA motif finding algorithms. [My Copy] BMC bioinformatics, Vol. 8 Suppl 7, No. Suppl 7. (2007) by Modan K. Das, Ho-Kwok K. Dai posted to mining motifs review tools by yevishere on 2008-01-08 00:27:21 as along with 17 people and 2 groups Dulce lusk wowalz svenrahmann isimpson daveGerrard coldmeadow druvus Stew emptyhb dquest nklee maximilianh csdhwang brant xili03 pradiptaray BergmanLab Bioinformatics - CRUK
	TFCONES: A database of vertebrate transcription factor-encoding genes and their associated conserved noncoding elements [My Copy] BMC Genomics, Vol. 8 (29 November 2007), 441. by Alison P. Lee, Yuchen Yang, Sydney Brenner, Byrappa Venkatesh posted to mining motifs tools by yevishere on 2008-01-08 00:26:52 as along with 3 people nklee maximilianh guhjy
	Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Victor Levitsky, Elena Ignatieva, Elena Ananko, et al.Igor Turnaev, Tatyana Merkulova, Nikolay Kolchanov, T. Hodgman posted to mining motifs tools by yevishere on 2008-01-08 00:22:02 as along with 5 people druvus nklee maximilianh csdhwang xili03
	Toucan: deciphering the cis-regulatory logic of coregulated genes. [My Copy] Nucleic Acids Res, Vol. 31, No. 6. (15 March 2003), pp. 1753-1764. by S. Aerts, G. Thijs, B. Coessens, M. Staes, Y. Moreau, B. De Moor posted to mining motifs tools by yevishere on 2008-01-08 00:20:26 as along with 5 people and 1 group troels_marstrand kaspermunch nur77 nklee xili03 Bioinformatics
	Genetic engineering of human embryonic stem cells with lentiviral vectors. [My Copy] Stem Cells Dev, Vol. 14, No. 4. (August 2005), pp. 367-377. by C. Xiong, D. Q. Tang, C. Q. Xie, et al.L. Zhang, K. F. Xu, W. E. Thompson, W. Chou, G. H. Gibbons, L. J. Chang, L. J. Yang, Y. E. Chen posted to cells lentivirus stem by yevishere on 2008-01-07 19:52:14 as
	Cyanine dye labeling reagents: sulfoindocyanine succinimidyl esters. [My Copy] Bioconjug Chem, Vol. 4, No. 2. (r 1993), pp. 105-111. by R. B. Mujumdar, L. A. Ernst, S. R. Mujumdar, C. J. Lewis, A. S. Waggoner posted to dutp labeling by yevishere on 2008-01-04 22:04:59 as
	Cyanine dye dUTP analogs for enzymatic labeling of DNA probes. [My Copy] Nucleic Acids Res, Vol. 22, No. 15. (11 August 1994), pp. 3226-3232. by H. Yu, J. Chao, D. Patek, R. Mujumdar, S. Mujumdar, A. S. Waggoner posted to dutp labeling microarray by yevishere on 2008-01-04 22:04:27 as
	Fluorescent high-density labeling of DNA: error-free substitution for a normal nucleotide [My Copy] Journal of Biotechnology In DNA-Sequencing at the Single Molecule Level, Vol. 86, No. 3. (13 April 2001), pp. 237-253. by Zeno Foldes-Papp, Bernhard Angerer, Waltraud Ankenbauer, Rudolf Rigler posted to dutp labeling microarray by yevishere on 2008-01-04 21:28:10 as
	Development of a DNA-Labeling System for Array-Based Comparative Genomic Hybridization [My Copy] J Biomol Tech, Vol. 16, No. 2. (1 June 2005), pp. 104-111. by Pauline T. Lieu, Peter Jozsi, Patrick Gilles, Todd Peterson posted to dna labeling microarray by yevishere on 2008-01-04 21:11:29 as
	Effects of filtering by Present call on analysis of microarray experiments. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by J. N. McClintick, H. J. Edenberg posted to affymetrix analysis filtering by yevishere on 2008-01-04 00:35:46 as along with 5 people jfr bertelsen heliopais ghattem waszak
	Pre-filtering improves reliability of Affymetrix GeneChips results when used to analyze gene expression in complex tissues. [My Copy] Mol Cell Probes (28 November 2007) by Dario Greco, Damiana Leo, Umberto di Porzio, Carla Perrone Capano, Petri Auvinen posted to affymetrix analysis microarray by yevishere on 2008-01-04 00:34:49 as along with 1 person Terkko
	An overview of image-processing methods for Affymetrix GeneChips. [My Copy] Brief Bioinform (5 December 2007) by Jose M M. Arteaga-Salas, Harry Zuzan, William B B. Langdon, Graham J G J. Upton, Andrew P P. Harrison posted to affymetrix analysis by yevishere on 2008-01-04 00:33:28 as along with 6 people and 1 group bertelsen lwaldron neils guhjy jfr aswin Bioinformatics
	Quality assessment of Affymetrix GeneChip data. [My Copy] OMICS, Vol. 10, No. 3. (2006), pp. 358-368. by S. Heber, B. Sick posted to analysis microarray by yevishere on 2008-01-04 00:23:59 as along with 5 people lwaldron zufar jfr maldi bertelsen
	A survey of motif discovery methods in an integrated framework [My Copy] Biology Direct, Vol. 1, No. 1. (06 April 2006), 11. by Geir K. Sandve, Finn Drabløs posted to mining motifs tools by yevishere on 2008-01-04 00:23:12 as along with 11 people and 1 group tomhebbron Scis0000002 maximilianh wowalz AbnerCYH aprasad dpollard samal csdhwang idonaldson yoonk EisenLab
	Discovering Motifs in Ranked Lists of DNA Sequences [My Copy] PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e39. by Eran Eden, Doron Lipson, Sivan Yogev, Zohar Yakhini posted to motifs tools by yevishere on 2008-01-04 00:22:30 as along with 3 people and 1 group heliopais dpollard dquest EisenLab
	A graph-based motif detection algorithm models complex nucleotide dependencies in transcription factor binding sites. [My Copy] Nucleic Acids Res, Vol. 34, No. 20. (2006), pp. 5730-5739. by B. T. Naughton, E. Fratkin, S. Batzoglou, D. L. Brutlag posted to motifs tools by yevishere on 2008-01-04 00:20:45 as along with 4 people and 1 group indigoviolet nklee xili03 GustavoLacerda EisenLab
	GOstat: find statistically overrepresented Gene Ontologies within a group of genes [My Copy] Bioinformatics, Vol. 20, No. 9. (12 June 2004), pp. 1464-1465. by Tim Beissbarth, Terence P. Speed posted to tools by yevishere on 2008-01-04 00:19:57 as along with 9 people and 1 group jperkins vkwn leechuck Yanno miguel RMGraze indigoviolet jdiggans ellakat EisenLab
	Sequence logos: a new way to display consensus sequences. [My Copy] Nucleic acids research, Vol. 18, No. 20. (25 October 1990), pp. 6097-6100. by T. D. Schneider, R. M. Stephens posted to tools by yevishere on 2008-01-04 00:19:33 as along with 8 people and 1 group mgomes GustavoLacerda stubrown calderonv hplatero analogAI indigoviolet austin EisenLab
	WebLogo: a sequence logo generator. [My Copy] Genome research, Vol. 14, No. 6. (1 June 2004), pp. 1188-1190. by Gavin E. Crooks, Gary Hon, John-Marc M. Chandonia, Steven E. Brenner posted to tools by yevishere on 2008-01-04 00:16:26 as along with 15 people and 2 groups daforerog ramonvidal gwallau ivankel dsmueller GustavoLacerda rpetrenko calderonv hplatero dfgreen Mehlhorn analogAI indigoviolet xiaobeizhao sobolevnrm EisenLab baker-group
	Quantitative prediction of NF-kappa B DNA-protein interactions. [My Copy] Proc Natl Acad Sci U S A, Vol. 99, No. 12. (11 June 2002), pp. 8167-8172. by I. A. Udalova, R. Mott, D. Field, D. Kwiatkowski posted to pbm by yevishere on 2008-01-04 00:11:43 as along with 2 people and 2 groups lptolik dpollard EisenLab cis-regulatory-evolution
	Quantitative high-throughput analysis of transcription factor binding specificities. [My Copy] Nucleic acids research, Vol. 32, No. 4. (2004) by J. Linnell, R. Mott, S. Field, D. P. Kwiatkowski, J. Ragoussis, I. A. Udalova posted to pbm by yevishere on 2008-01-04 00:11:23 as along with 2 people absterga lptolik
	Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors. [My Copy] Nucleic Acids Res, Vol. 30, No. 5. (1 March 2002), pp. 1255-1261. by M. L. Bulyk, P. L. Johnson, G. M. Church posted to pbm by yevishere on 2008-01-04 00:10:11 as along with 1 person medic0747
	Genome-Wide Location and Function of DNA Binding Proteins [My Copy] Science, Vol. 290, No. 5500. (22 December 2000), pp. 2306-2309. by Bing Ren, Francois Robert, John J. Wyrick, et al.Oscar Aparicio, Ezra G. Jennings, Itamar Simon, Julia Zeitlinger, Jorg Schreiber, Nancy Hannett, Elenita Kanin, Thomas L. Volkert, Christopher J. Wilson, Stephen P. Bell, Richard A. Young posted to chipchip by yevishere on 2008-01-04 00:09:31 as along with 9 people TorstenWaldminghaus aprasad miguel kaarsinogen johncumbers tvdbulck epigenetics kristallreiner dquest
	PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny. [My Copy] PLoS computational biology, Vol. 1, No. 7. (December 2005) by Rahul Siddharthan, Eric D. Siggia, Erik van Nimwegen posted to mining motifs by yevishere on 2008-01-04 00:07:13 as along with 17 people and 3 groups farhat wowalz aprasad cajunsushi treangen druvus ana postrational dquest AaronDarling nickluscombe noano adsmitty lusk lilou idonaldson isimpson structural_bioinformatics Bioinformatics EBI-regulation
	An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments. [My Copy] Nature biotechnology, Vol. 20, No. 8. (August 2002), pp. 835-839. by X. Shirley Liu, Douglas L. Brutlag, Jun S. Liu posted to motifs by yevishere on 2008-01-04 00:06:49 as along with 5 people Dulce troels_marstrand opheliav dquest xili03
	Quantitative profiling of protein-DNA binding on microarrays. [My Copy] Methods Mol Biol, Vol. 338 (2006), pp. 261-280. by J. Ragoussis, S. Field, I. A. Udalova posted to pbm by yevishere on 2008-01-04 00:06:29 as
	Proof of concept for microarray-based detection of DNA-binding oncogenes in cell extracts. [My Copy] Nucleic Acids Res, Vol. 33, No. 8. (2005) by T. Egener, E. Roulet, M. Zehnder, P. Bucher, N. Mermod posted to pbm by yevishere on 2008-01-04 00:06:05 as
	Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays [My Copy] Nature Genetics, Vol. 36, No. 12. (14 November 2004), 1331. by Sonali Mukherjee, Michael F. Berger, Ghil Jona, et al.Xun S. Wang, Dale Muzzey, Michael Snyder, Richard A. Young, Martha L. Bulyk posted to pbm by yevishere on 2008-01-04 00:05:04 as along with 5 people johncumbers olympos nklee emptyhb kristallreiner
	Protein binding microarrays (PBMs) for rapid, high-throughput characterization of the sequence specificities of DNA binding proteins. [My Copy] Methods Mol Biol, Vol. 338 (2006), pp. 245-260. by M. F. Berger, M. L. Bulyk posted to pbm by yevishere on 2008-01-04 00:04:46 as along with 1 person guhjy
	Analysis of sequence specificities of DNA-binding proteins with protein binding microarrays. [My Copy] Methods Enzymol, Vol. 410 (2006), pp. 279-299. by M. L. Bulyk posted to pbm by yevishere on 2008-01-04 00:04:26 as
	Protein binding microarrays for the characterization of DNA-protein interactions. [My Copy] Adv Biochem Eng Biotechnol, Vol. 104 (2007), pp. 65-85. by M. L. Bulyk posted to pbm by yevishere on 2008-01-04 00:04:05 as
	Accuracy and reproducibility of protein-DNA microarray technology. [My Copy] Adv Biochem Eng Biotechnol, Vol. 104 (2007), pp. 87-110. by S. Field, I. Udalova, J. Ragoussis posted to pbm by yevishere on 2008-01-04 00:03:46 as
	Immobilization of DNA onto poly(dimethylsiloxane) surfaces and application to a microelectrochemical enzyme-amplified DNA hybridization assay. [My Copy] Langmuir, Vol. 20, No. 14. (6 July 2004), pp. 5905-5910. by D. Liu, R. K. Perdue, L. Sun, R. M. Crooks posted to pbm by yevishere on 2008-01-04 00:00:56 as
	Expression of constitutive androstane receptor, hepatic nuclear factor 4 alpha, and P450 oxidoreductase genes determines interindividual variability in basal expression and activity of a broad scope of xenobiotic metabolism genes in the human liver. [My Copy] Drug Metab Dispos, Vol. 35, No. 9. (September 2007), pp. 1700-1710. by M. Wortham, M. Czerwinski, L. He, A. Parkinson, Y. J. Wan posted to drugs hnf4 by yevishere on 2008-01-03 23:59:33 as along with 1 person ggeneraux
	Normalization and experimental design for ChIP-chip data [My Copy] BMC Bioinformatics, Vol. 8 (25 June 2007), 219. by Shouyong Peng, Artyom A. Alekseyenko, Erica Larschan, Mitzi I. Kuroda, Peter J. Park posted to analysis chipchip by yevishere on 2008-01-03 23:58:25 as along with 7 people and 2 groups rschulz siebert guhjy kengg Stew caseybrown baldigroup EisenLab Plantandetc
	Model-based deconvolution of genome-wide DNA binding. [My Copy] Bioinformatics (1 December 2007) by David J J. Reiss, Marc T T. Facciotti, Nitin S S. Baliga posted to hnf4 motifs by yevishere on 2008-01-03 23:58:02 as along with 5 people djkt idonaldson guhjy vega isimpson
	Effects of hepatocyte nuclear factor-4alpha on the regulation of the hepatic acute phase response. [My Copy] J Mol Biol, Vol. 371, No. 2. (10 August 2007), pp. 323-335. by Z. Wang, P. A. Burke posted to expresion hnf4 by yevishere on 2008-01-03 23:54:04 as

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hnf4	195
targets	158
s1a	126
pbm	18
mining	16
motifs	14
diabetes	10
tools	10
microarray	9
review	9
motif	8
expression	7
chipchip	6
analysis	5
interactions	4
labeling	4
pancreas	4
receptor	3
mapping	3
nuclear	3
ligands	3
dutp	3
toxicology	3
affymetrix	3
drugs	2
phosphorylation	2
fattyacid	1
lentivirus	1
isoforms	1
stem	1
modulation	1
kidney	1
bileacids	1
pwm	1
tool	1
tss	1
mutatant	1
aging	1
myc	1
prediction	1
dna	1
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filtering	1
er	1
motf	1
enrichment	1
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qpcr	1
genomics	1
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hnf4gamma	1
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