zambujo's hiv [45 articles] Export

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	The first postmodern pandemic: 25 years of HIV/AIDS. [My Copy] Journal of Internal Medicine, Vol. 263, No. 3. (2008) by L. O. Kallings posted to hiv review by zambujo on 2008-09-26 13:45:52 as
	An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope [My Copy] PLoS Comput Biol, Vol. 3, No. 11. (2007) by Art F. I. Poon, Fraser I. Lewis, Sergei, Simon D. W. Frost edited by E. I. Shakhnovich posted to hiv by zambujo on 2007-12-22 19:57:47 as
	HIV-1 fitness: implications for drug resistance, disease progression, and global epidemic evolution [My Copy] HIV Sequence Compendium (2001), pp. 134-170. by Quinones M. E. Mateu, E. J. Arts posted to fitness hiv review by zambujo on 2007-11-29 10:33:09 as
	A Novel Phenotypic Drug Susceptibility Assay for Human Immunodeficiency Virus Type 1 [My Copy] Antimicrobial Agents and Chemotherapy, Vol. 44, No. 4. (2000) by C. J. Petropoulos, N. T. Parkin, K. L. Limoli, et al.Y. S. Lie, T. Wrin, W. Huang, H. Tian, D. Smith, G. A. Winslow, D. J. Capon, Others posted to hiv by zambujo on 2007-11-29 10:30:49 as
	HIV drug development: the next 25 years. [My Copy] Nat Rev Drug Discov (2007) by C. Flexner posted to hiv by zambujo on 2007-11-26 10:08:53 as
	Consistent Viral Evolutionary Changes Associated with the Progression of Human Immunodeficiency Virus Type 1 Infection [My Copy] J. Virol., Vol. 73, No. 12. (1 December 1999), pp. 10489-10502. by Raj Shankarappa, Joseph B. Margolick, Stephen J. Gange, et al.Allen G. Rodrigo, David Upchurch, Homayoon Farzadegan, Phalguni Gupta, Charles R. Rinaldo, Gerald H. Learn, Xi He, Xiao-Li Huang, James I. Mullins posted to hiv by zambujo on 2007-11-06 13:14:08 as along with 1 person kieran101
	Distribution of Human Immunodeficiency Virus Type 1 Protease and Reverse Transcriptase Mutation Patterns in 4,183 Persons Undergoing Genotypic Resistance Testing [My Copy] Antimicrobial Agents and Chemotherapy, Vol. 48, No. 8. (2003), pp. 3122-3126. by S. Y. Rhee, T. Liu, J. Ravela, M. J. Gonzales, R. W. Shafer posted to hiv pr rt trevor by zambujo on 2007-10-19 08:36:33 as
	Viral latency in HIV disease. [My Copy] Cell, Vol. 82, No. 2. (1995), pp. 183-8. by J. M. Mccune posted to hiv review by zambujo on 2007-10-15 11:39:26 as
	HIV-1 over time: fitness loss or robustness gain? [My Copy] Nature Reviews Microbiology, Vol. 5, No. 9., pp. 1-2. by Morgane Rolland, Christian Brander, David C. Nickle, et al.Joshua T. Herbeck, Geoffrey S. Gottlieb, Mary S. Campbell, Brandon S. Maust, James I. Mullins posted to fitness hiv by zambujo on 2007-09-24 23:30:30 as
	Fitness of drug resistant HIV-1: methodology and clinical implications [My Copy] Drug Resistance Updates, Vol. 5, No. 6. (2002), pp. 224-233. by Quiñones M. E. Mateu, E. J. Arts posted to fitness hiv review by zambujo on 2007-06-27 22:49:18 as
	The activity of the protease of human immunodeficiency virus type 1 is initiated at the membrane of infected cells before the release of viral proteins and is required for release to occur with maximum efficiency. [My Copy] Journal of Virology, Vol. 68, No. 10. (1994), pp. 6782-6786. by A. H. Kaplan, M. Manchester, R. Swanstrom posted to hiv pr by zambujo on 2007-06-18 11:44:32 as
	Diversity and Virulence Thresholds in AIDS [My Copy] PNAS, Vol. 91, No. 2. (18 January 1994), pp. 544-548. by Rj de Boer, Mc Boerlijst posted to hiv modelling by zambujo on 2007-06-13 13:39:48 as
	Antigenic oscillations and shifting immunodominance in HIV-1 infections. [My Copy] Nature, Vol. 375, No. 6532. (15 June 1995), pp. 606-611. by M. A. Nowak, R. M. May, R. E. Phillips, et al.S. Rowland-Jones, D. G. Lalloo, S. McAdam, P. Klenerman, B. Köppe, K. Sigmund, C. R. Bangham posted to epitope hiv host by zambujo on 2007-06-13 13:37:31 as
	High resolution structures of HIV-1 RT from four RT-inhibitor complexes. [My Copy] Nat Struct Biol, Vol. 2, No. 4. (April 1995), pp. 293-302. by J. Ren, R. Esnouf, E. Garman, et al.D. Somers, C. Ross, I. Kirby, J. Keeling, G. Darby, Y. Jones, D. Stuart posted to clanokinsa hiv protein rt by zambujo on 2007-06-12 22:55:29 as
	Hydrophilic peptides derived from the transframe region of Gag-Pol inhibit the HIV-1 protease. [My Copy] Biochemistry, Vol. 37, No. 8. (24 February 1998), pp. 2105-2110. by J. M. Louis, F. Dyda, N. T. Nashed, A. R. Kimmel, D. R. Davies posted to clanokinsa hiv pr protein by zambujo on 2007-06-12 22:53:05 as
	HIV-1: Fifteen Proteins and an RNA [My Copy] Annual Review of Biochemistry, Vol. 67, No. 1. (1998), pp. 1-25. by A. D. Frankel, J. A. T. Young posted to hiv review by zambujo on 2007-06-08 09:39:23 as
	Initial Cleavage of the Human Immunodeficiency Virus Type 1 GagPol Precursor by Its Activated Protease Occurs by an Intramolecular Mechanism [My Copy] Journal of Virology, Vol. 78, No. 16. (2003), pp. 8477-8485. by S. C. Pettit, L. E. Everitt, S. Choudhury, B. M. Dunn, A. H. Kaplan posted to gagpol hiv by zambujo on 2007-06-08 09:28:44 as
	HIV-1 protease inhibits its homologous reverse transcriptase by protein-protein interaction [My Copy] Nucleic Acids Research, Vol. 25, No. 9., pp. 1709-1714. by M. Bottcher, F. Grosse posted to hiv interactions pr rt by zambujo on 2007-06-08 09:19:04 as
	Folding Regulates Autoprocessing of HIV-1 Protease Precursor [My Copy] Journal of Biological Chemistry, Vol. 280, No. 12. (2005) by A. Chatterjee, P. Mridula, R. K. Mishra, R. Mittal, R. V. Hosur posted to hiv pr by zambujo on 2007-06-08 09:14:14 as
	HIV-Protease Inhibitors [My Copy] Vol. 338, No. 18. (1998), pp. 1281-1293. by C. Flexner posted to drugs hiv by zambujo on 2007-06-08 09:09:14 as
	Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 A resolution [My Copy] Science, Vol. 246, No. 4934. (1 December 1989), pp. 1149-1152. by M. Miller, J. Schneider, Bk Sathyanarayana, et al.Mv Toth, Gr Marshall, L. Clawson, L. Selk, Sb Kent, A. Wlodawer posted to hiv pr by zambujo on 2007-06-08 08:36:18 as along with 1 person nigham
	Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor [My Copy] Science, Vol. 256, No. 5065. (26 June 1992), pp. 1783-1790. by La Kohlstaedt, J. Wang, Jm Friedman, Pa Rice, Ta Steitz posted to hiv rt by zambujo on 2007-06-08 08:34:30 as
	Mutation Patterns and Structural Correlates in Human Immunodeficiency Virus Type 1 Protease following Different Protease Inhibitor Treatments [My Copy] Journal of Virology, Vol. 77, No. 8. (2003), pp. 4836-4847. by T. D. Wu, C. A. Schiffer, M. J. Gonzales, et al.J. Taylor, R. Kantor, S. Chou, D. Israelski, A. R. Zolopa, W. J. Fessel, R. W. Shafer posted to clanokinsa hiv pr by zambujo on 2007-06-08 08:11:33 as
	Inhibitors of HIV-1 protease: a major success of structure-assisted drug design [My Copy] Annu. Rev. Biophys. Biomol. Struct, Vol. 27, No. 249. (1998) by A. Wlodawer, J. Vondrasek posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Conserved folding in retroviral proteases: crystal structure of a synthetic HIV-1 protease [My Copy] Science, Vol. 245, No. 4918. (1989) by A. Wlodawer, M. Miller, M. Jaskolski, et al.B. K. Sathyanarayana, E. Baldwin, I. T. Weber, L. M. Selk, L. Clawson, J. Schneider, S. B. Kent posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	An attack on the AIDS virus: Inhibition of the HIV-1 protease [My Copy] Journal of chemical education, Vol. 70, No. 1. (1993), pp. 3-9. by E. J. Volker posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	The thermodynamic basis of resistance to HIV-1 protease inhibition. Calorimetric analysis of the V82F/I84V active site resistant mutant [My Copy] Biochemistry, Vol. 39, No. 39. (2000), pp. 11876-83. by M. J. Todd, I. Luque, Velazquez A. Campoy, E. Freire posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Origins and Evolution of AIDS Viruses [My Copy] Biological Bulletin, Vol. 196, No. 3. (1999), pp. 338-342. by P. M. Sharp, E. Bailes, D. L. Robertson, F. Gao, B. H. Hahn posted to hiv by zambujo on 2007-06-08 08:11:33 as
	Analysis of HIV by entropy evolution rate [My Copy] Amino Acids, Vol. 14, No. 4. (1998), pp. 343-352. by K. Sato, S. Miyazaki, M. Ohya posted to entropy hiv information by zambujo on 2007-06-08 08:11:33 as
	HIV-1 Subtype B Protease and Reverse Transcriptase Amino Acid Covariation [My Copy] PLOS Computational Biology, Vol. 3 (2007), pp. 1-8. by Soo Y. Rhee, Tommy F. Liu, Susan P. Holmes, Robert W. Shafer posted to clanokinsa hiv information pr rt by zambujo on 2007-06-08 08:11:33 as
	Twenty years of therapy for HIV-1 infection [My Copy] Nature Medicine, Vol. 9, No. 7. (2003), pp. 867-873. by R. J. Pomerantz, D. L. Horn posted to hiv review by zambujo on 2007-06-08 08:11:33 as
	Drug resistance in HIV-1 protease: Flexibility-assisted mechanism of compensatory mutations [My Copy] Protein Science, Vol. 11, No. 10. (2002), pp. 2393-2402. by S. Piana, P. Carloni, U. Rothlisberger posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	HIV-1 Protease Catalytic Efficiency Effects Caused by Random Single Amino Acid Substitutions [My Copy] Molecular Biology and Evolution (2006) by M. Parera, G. Fernandez, B. Clotet, M. A. Martinez posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Flexibility and function in HIV-1 protease [My Copy] Nature Structural Biology, Vol. 2, No. 4. (1995), pp. 274-280. by L. K. Nicholson, T. Yamazaki, D. A. Torchia, et al.S. Grzesiek, A. Bax, S. J. Stahl, J. D. Kaufman, P. T. Wingfield, P. Y. S. Lam, P. K. Jadhav, Others posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	A major role for a set of non-active site mutations in the development of HIV-1 protease drug resistance [My Copy] Biochemistry, Vol. 42, No. 3. (2003), pp. 631-638. by S. Muzammil, P. Ross, E. Freire posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Computational Mutagenesis Studies of Protein Structure-Function Correlations [My Copy] PROTEINS: Structure, Function, and Bioinformatics, Vol. 64 (2006), pp. 234-245. by M. Masso, Z. Lu, I. I. Vaisman posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	In vivo sequence diversity of the protease of human immunodeficiency virus type 1: presence of protease inhibitor-resistant variants in untreated subjects [My Copy] Journal of Virology, Vol. 70, No. 3. (1996), pp. 2038-2043. by W. J. Lech, G. Wang, Y. L. Yang, et al.Y. Chee, K. Dorman, D. Mccrae, L. C. Lazzeroni, J. W. Erickson, J. S. Sinsheimer, A. H. Kaplan posted to hiv pr by zambujo on 2007-06-08 08:11:32 as
	Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function [My Copy] Structure, Vol. 7, No. 9. (1999), pp. 1047-1055. by R. Ishima, D. I. Freedberg, Y. X. Wang, J. M. Louis, D. A. Torchia posted to hiv pr by zambujo on 2007-06-08 08:11:32 as
	HIV-1 protease flaps spontaneously open and reclose in molecular dynamics simulations [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 4. (2006), pp. 915-920. by V. Hornak, A. Okur, R. C. Rizzo, C. Simmerling posted to clanokinsa hiv pr by zambujo on 2007-06-08 08:11:32 as
	Covariation of amino acid positions in HIV-1 protease. [My Copy] Virology, Vol. 314, No. 2. (2003), pp. 536-48. by N. G. Hoffman, C. A. Schiffer, R. Swanstrom posted to covariation hiv information pr resistance by zambujo on 2007-06-08 08:11:32 as
	Time Trends in Primary HIV-1 Drug Resistance Among Recently Infected Persons [My Copy] JAMA Journal of the American Medical Association, Vol. 288 (2002), pp. 181-188. by R. M. Grant, F. M. Hecht, M. Warmerdam, et al.L. Liu, T. Liegler, C. J. Petropoulos, N. S. Hellmann, M. Chesney, M. P. Busch, J. O. Kahn posted to clanokinsa hiv by zambujo on 2007-06-08 08:11:32 as
	HIV and AIDS: 20 years of science [My Copy] Nature Medicine, Vol. 9, No. 7. (2003), pp. 839-843. by A. S. Fauci posted to clanokinsa hiv review by zambujo on 2007-06-08 08:11:32 as
	Positive Selection Detection in 40,000 Human Immunodeficiency Virus (HIV) Type 1 Sequences Automatically Identifies Drug Resistance and Positive Fitness Mutations in HIV Protease and Reverse Transcriptase [My Copy] Journal of Virology, Vol. 78, No. 7. (2004), pp. 3722-3732. by L. Chen, A. Perlina, C. J. Lee posted to clanokinsa hiv pr rt trevor by zambujo on 2007-06-08 08:11:32 as
	Evidence for Positive Epistasis in HIV-1 [My Copy] Science, Vol. 306 (2004), pp. 1547-1550. by S. Bonhoeffer, C. Chappey, N. T. Parkin, J. M. Whitcomb, C. J. Petropoulos posted to clanokinsa hiv by zambujo on 2007-06-08 08:11:32 as
	Computational Analysis of HIV Drug Resistance Data [My Copy] (2004) by N. Beerenwinkel posted to clanokinsa hiv information pr rt by zambujo on 2007-06-08 08:11:32 as

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hiv	45
bibtex-import	41
information	32
pr	25
protein	22
review	19
statistics	17
entropy	14
sex	14
clanokinsa	13
stability	9
fitness	8
evolution	7
rt	7
recombination	5
kernel	4
pca	4
epistasis	3
host	3
resistance	3
svm	3
thermostability	3
binding	2
epitope	2
interactions	2
modelling	2
parasite	2
sleep	2
trevor	2
ai	1
bootstrap	1
clima	1
complexity	1
covariation	1
diversity	1
drugs	1
estimation	1
folding	1
gagpol	1
likelihood	1
polymorphism	1
population	1
rationality	1

zambujo's hiv [45 articles] Export

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