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	Distribution of Human Immunodeficiency Virus Type 1 Protease and Reverse Transcriptase Mutation Patterns in 4,183 Persons Undergoing Genotypic Resistance Testing [My Copy] Antimicrobial Agents and Chemotherapy, Vol. 48, No. 8. (2003), pp. 3122-3126. by S. Y. Rhee, T. Liu, J. Ravela, M. J. Gonzales, R. W. Shafer posted to hiv pr rt trevor by zambujo on 2007-10-19 08:36:33 as
	The activity of the protease of human immunodeficiency virus type 1 is initiated at the membrane of infected cells before the release of viral proteins and is required for release to occur with maximum efficiency. [My Copy] Journal of Virology, Vol. 68, No. 10. (1994), pp. 6782-6786. by A. H. Kaplan, M. Manchester, R. Swanstrom posted to hiv pr by zambujo on 2007-06-18 11:44:32 as
	Role of conformational fluctuations in the enzymatic reaction of HIV-1 protease. [My Copy] J Mol Biol, Vol. 319, No. 2. (31 May 2002), pp. 567-583. by S. Piana, P. Carloni, M. Parrinello posted to clanokinsa pr protein by zambujo on 2007-06-13 13:27:55 as
	Hydrophilic peptides derived from the transframe region of Gag-Pol inhibit the HIV-1 protease. [My Copy] Biochemistry, Vol. 37, No. 8. (24 February 1998), pp. 2105-2110. by J. M. Louis, F. Dyda, N. T. Nashed, A. R. Kimmel, D. R. Davies posted to clanokinsa hiv pr protein by zambujo on 2007-06-12 22:53:05 as
	HIV-1 protease inhibits its homologous reverse transcriptase by protein-protein interaction [My Copy] Nucleic Acids Research, Vol. 25, No. 9., pp. 1709-1714. by M. Bottcher, F. Grosse posted to hiv interactions pr rt by zambujo on 2007-06-08 09:19:04 as
	Folding Regulates Autoprocessing of HIV-1 Protease Precursor [My Copy] Journal of Biological Chemistry, Vol. 280, No. 12. (2005) by A. Chatterjee, P. Mridula, R. K. Mishra, R. Mittal, R. V. Hosur posted to hiv pr by zambujo on 2007-06-08 09:14:14 as
	Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 A resolution [My Copy] Science, Vol. 246, No. 4934. (1 December 1989), pp. 1149-1152. by M. Miller, J. Schneider, Bk Sathyanarayana, et al.Mv Toth, Gr Marshall, L. Clawson, L. Selk, Sb Kent, A. Wlodawer posted to hiv pr by zambujo on 2007-06-08 08:36:18 as along with 1 person nigham
	Mutation Patterns and Structural Correlates in Human Immunodeficiency Virus Type 1 Protease following Different Protease Inhibitor Treatments [My Copy] Journal of Virology, Vol. 77, No. 8. (2003), pp. 4836-4847. by T. D. Wu, C. A. Schiffer, M. J. Gonzales, et al.J. Taylor, R. Kantor, S. Chou, D. Israelski, A. R. Zolopa, W. J. Fessel, R. W. Shafer posted to clanokinsa hiv pr by zambujo on 2007-06-08 08:11:33 as
	Inhibitors of HIV-1 protease: a major success of structure-assisted drug design [My Copy] Annu. Rev. Biophys. Biomol. Struct, Vol. 27, No. 249. (1998) by A. Wlodawer, J. Vondrasek posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Conserved folding in retroviral proteases: crystal structure of a synthetic HIV-1 protease [My Copy] Science, Vol. 245, No. 4918. (1989) by A. Wlodawer, M. Miller, M. Jaskolski, et al.B. K. Sathyanarayana, E. Baldwin, I. T. Weber, L. M. Selk, L. Clawson, J. Schneider, S. B. Kent posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	An attack on the AIDS virus: Inhibition of the HIV-1 protease [My Copy] Journal of chemical education, Vol. 70, No. 1. (1993), pp. 3-9. by E. J. Volker posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	The thermodynamic basis of resistance to HIV-1 protease inhibition. Calorimetric analysis of the V82F/I84V active site resistant mutant [My Copy] Biochemistry, Vol. 39, No. 39. (2000), pp. 11876-83. by M. J. Todd, I. Luque, Velazquez A. Campoy, E. Freire posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	HIV-1 Subtype B Protease and Reverse Transcriptase Amino Acid Covariation [My Copy] PLOS Computational Biology, Vol. 3 (2007), pp. 1-8. by Soo Y. Rhee, Tommy F. Liu, Susan P. Holmes, Robert W. Shafer posted to clanokinsa hiv information pr rt by zambujo on 2007-06-08 08:11:33 as
	Drug resistance in HIV-1 protease: Flexibility-assisted mechanism of compensatory mutations [My Copy] Protein Science, Vol. 11, No. 10. (2002), pp. 2393-2402. by S. Piana, P. Carloni, U. Rothlisberger posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	HIV-1 Protease Catalytic Efficiency Effects Caused by Random Single Amino Acid Substitutions [My Copy] Molecular Biology and Evolution (2006) by M. Parera, G. Fernandez, B. Clotet, M. A. Martinez posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Flexibility and function in HIV-1 protease [My Copy] Nature Structural Biology, Vol. 2, No. 4. (1995), pp. 274-280. by L. K. Nicholson, T. Yamazaki, D. A. Torchia, et al.S. Grzesiek, A. Bax, S. J. Stahl, J. D. Kaufman, P. T. Wingfield, P. Y. S. Lam, P. K. Jadhav, Others posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	A major role for a set of non-active site mutations in the development of HIV-1 protease drug resistance [My Copy] Biochemistry, Vol. 42, No. 3. (2003), pp. 631-638. by S. Muzammil, P. Ross, E. Freire posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	Computational Mutagenesis Studies of Protein Structure-Function Correlations [My Copy] PROTEINS: Structure, Function, and Bioinformatics, Vol. 64 (2006), pp. 234-245. by M. Masso, Z. Lu, I. I. Vaisman posted to hiv pr by zambujo on 2007-06-08 08:11:33 as
	In vivo sequence diversity of the protease of human immunodeficiency virus type 1: presence of protease inhibitor-resistant variants in untreated subjects [My Copy] Journal of Virology, Vol. 70, No. 3. (1996), pp. 2038-2043. by W. J. Lech, G. Wang, Y. L. Yang, et al.Y. Chee, K. Dorman, D. Mccrae, L. C. Lazzeroni, J. W. Erickson, J. S. Sinsheimer, A. H. Kaplan posted to hiv pr by zambujo on 2007-06-08 08:11:32 as
	Protein flexibility predictions using graph theory [My Copy] Proteins Structure Function and Genetics, Vol. 44, No. 2. (2001), pp. 150-165. by D. J. Jacobs, A. J. Rader, L. A. Kuhn, M. F. Thorpe posted to pr stability by zambujo on 2007-06-08 08:11:32 as
	Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function [My Copy] Structure, Vol. 7, No. 9. (1999), pp. 1047-1055. by R. Ishima, D. I. Freedberg, Y. X. Wang, J. M. Louis, D. A. Torchia posted to hiv pr by zambujo on 2007-06-08 08:11:32 as
	HIV-1 protease flaps spontaneously open and reclose in molecular dynamics simulations [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 4. (2006), pp. 915-920. by V. Hornak, A. Okur, R. C. Rizzo, C. Simmerling posted to clanokinsa hiv pr by zambujo on 2007-06-08 08:11:32 as
	Covariation of amino acid positions in HIV-1 protease. [My Copy] Virology, Vol. 314, No. 2. (2003), pp. 536-48. by N. G. Hoffman, C. A. Schiffer, R. Swanstrom posted to covariation hiv information pr resistance by zambujo on 2007-06-08 08:11:32 as
	Positive Selection Detection in 40,000 Human Immunodeficiency Virus (HIV) Type 1 Sequences Automatically Identifies Drug Resistance and Positive Fitness Mutations in HIV Protease and Reverse Transcriptase [My Copy] Journal of Virology, Vol. 78, No. 7. (2004), pp. 3722-3732. by L. Chen, A. Perlina, C. J. Lee posted to clanokinsa hiv pr rt trevor by zambujo on 2007-06-08 08:11:32 as
	Computational Analysis of HIV Drug Resistance Data [My Copy] (2004) by N. Beerenwinkel posted to clanokinsa hiv information pr rt by zambujo on 2007-06-08 08:11:32 as

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hiv	45
bibtex-import	41
information	32
pr	25
protein	22
review	19
statistics	17
entropy	14
sex	14
clanokinsa	13
stability	9
fitness	8
evolution	7
rt	7
recombination	5
kernel	4
pca	4
epistasis	3
host	3
resistance	3
svm	3
thermostability	3
binding	2
epitope	2
interactions	2
modelling	2
parasite	2
sleep	2
trevor	2
ai	1
bootstrap	1
clima	1
complexity	1
covariation	1
diversity	1
drugs	1
estimation	1
folding	1
gagpol	1
likelihood	1
polymorphism	1
population	1
rationality	1

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