zhouyu's library 29 articles Export

	Biological basis for restriction of microRNA targets to the 3\|[prime]\| untranslated region in mammalian mRNAs [My Copy] Nature Structural & Molecular Biology, Vol. 16, No. 2. (01 February 2009), pp. 144-150. by Shuo Gu, Lan Jin, Feijie Zhang, Peter Sarnow, Mark A. Kay posted to 3utr microrna target by zhouyu on 2009-02-09 02:35:21 as along with 6 people and 1 group hcoller cassj valeriehilgers heliopais jforman daforerog microRNA
	Alternative splicing of Alu exons--two arms are better than one. [My Copy] Nucleic Acids Res (14 February 2008) by Nurit Gal-Mark, Schraga Schwartz, Gil Ast posted to as by zhouyu on 2008-12-29 05:32:51 as along with 3 people and 1 group andreasapostolides dchughes paulcartwright BergmanLab
	Multiple significance tests: the Bonferroni method. [My Copy] BMJ, Vol. 310, No. 6973. (January 1995) by J. M. Bland, D. G. Altman posted to statistics by zhouyu on 2008-11-14 10:09:09 as along with 1 person winniew
	F-Seq: a feature density estimator for high-throughput sequence tags [My Copy] Bioinformatics, Vol. 24, No. 21. (1 November 2008), pp. 2537-2538. by Alan P. Boyle, Justin Guinney, Gregory E. Crawford, Terrence S. Furey posted to hits by zhouyu on 2008-11-06 08:40:53 as along with 18 people and 2 groups hzoltan n00c darian idonaldson michaelbarton inesdesantiago gdb ewilban1 tonamswish guhjy kmdaily cassj fhalbrit jfr rschulz polivares cthachuk aprasad JLab BergmanLab
	Automatic identification of group I intron cores in genomic DNA sequences. [My Copy] J Mol Biol, Vol. 235, No. 4. (28 January 1994), pp. 1206-1217. by F. Lisacek, Y. Diaz, F. Michel posted to citron rna by zhouyu on 2008-09-12 09:57:44 as along with 1 person arcticrasta
	Effects of local mRNA structure on posttranscriptional gene silencing [My Copy] Proceedings of the National Academy of Sciences (2008) by Stephen I. Rudnick, Jyothishmathi Swaminathan, Marina Sumaroka, Stephen Liebhaber, Alan M. Gewirtz posted to rna structure by zhouyu on 2008-09-12 01:25:06 as
	GeneTrack--a genomic data processing and visualization framework [My Copy] Bioinformatics, Vol. 24, No. 10. (15 May 2008), pp. 1305-1306. by Istvan Albert, Shinichiro Wachi, Cizhong Jiang, B. Franklin Pugh posted to genome method by zhouyu on 2008-09-11 02:47:43 as along with 6 people ewilban1 tonamswish cassj wisdom_love guhjy inesdesantiago
	A space-efficient and accurate method for mapping and aligning cDNA sequences onto genomic sequence [My Copy] Nucl. Acids Res., Vol. 36, No. 8. (1 May 2008), pp. 2630-2638. by Osamu Gotoh posted to mapping by zhouyu on 2008-09-11 02:44:58 as along with 7 people kittipat natstreet druvus guhjy wisdom_love GenEglob inesdesantiago
	Dissecting protein-RNA recognition sites [My Copy] Nucl. Acids Res., Vol. 36, No. 8. (19 March 2008), pp. gkn102-2716. by Ranjit P. Bahadur, Martin Zacharias, Joel Janin posted to protein rna by zhouyu on 2008-09-11 02:43:57 as along with 6 people and 1 group balewis aditi9783 svozil dfgreen marck inesdesantiago Bioinformatics
	Statistical significance for genomewide studies [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 16. (5 August 2003), pp. 9440-9445. by John D. Storey, Robert Tibshirani posted to statistics by zhouyu on 2008-07-08 08:19:46 as along with 34 people and 2 groups jperkins arider1 ilyashl icecrown bertelsen jbhiatt aviad_work biomcgary daforerog treangen druvus vertikalist maximilianh diging_data egreenfest guhjy textoris RMGraze jen_drake hggr frohike schuylrp grahamc incovoma kynn sancho 7ofAnn nicholso shikin wirawan BrianTomasik roys sconlan bpcusack BTS-PT-AS-CS Bioinformatics
	Translational control of intron splicing in eukaryotes. [My Copy] Nature, Vol. 451, No. 7176. (17 January 2008), pp. 359-362. by Olivier Jaillon, Khaled Bouhouche, Jean-François F. Gout, et al.Jean-Marc M. Aury, Benjamin Noel, Baptiste Saudemont, Mariusz Nowacki, Vincent Serrano, Betina M. Porcel, Béatrice Ségurens, Anne Le Mouël, Gersende Lepère, Vincent Schächter, Mireille Bétermier, Jean Cohen, Patrick Wincker, Linda Sperling, Laurent Duret, Eric Meyer posted to no-tag by zhouyu on 2008-07-08 07:33:28 as along with 5 people and 1 group stajich gjuggler mclarenv seitentaisei raistrick Mycology
	Microarray retriever: a web-based tool for searching and large scale retrieval of public microarray data. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008) by Alexander E. Ivliev, Peter A. 't Hoen, Michel P. Villerius, Johan T. den Dunnen, Bernd W. Brandt posted to microarray by zhouyu on 2008-05-13 05:47:41 as along with 4 people and 1 group daforerog Zephyrus jfr guhjy Roswell Cancer Crosstalk
	MicroRNA expression profiles classify human cancers [My Copy] Nature, Vol. 435, No. 7043. (09 June 2005), pp. 834-838. by Jun Lu, Gad Getz, Eric A. Miska, et al.Ezequiel Alvarez-Saavedra, Justin Lamb, David Peck, Alejandro Sweet-Cordero, Benjamin L. Ebert, Raymond H. Mak, Adolfo A. Ferrando, James R. Downing, Tyler Jacks, H. Robert Horvitz, Todd R. Golub posted to microarray by zhouyu on 2008-05-10 04:25:45 as along with 15 people and 2 groups songpku tibbitts abhattac cswinburne jfr tmmurali ajeffs tuck mtagaya ealloza frohike capitall maralena giovenko srp33 Bioinformatics microRNA
	Bioconductor: open software development for computational biology and bioinformatics. [My Copy] Genome biology, Vol. 5, No. 10. (2004), R80. by Robert C. Gentleman, Vincent J. Carey, Douglas M. Bates, et al.Ben Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J. Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean Y. Yang, Jianhua Zhang posted to bioconductor by zhouyu on 2008-05-10 04:14:23 as along with 25 people and 1 group shikin schwalb mqbphcw3 isimpson anf sebastien_vigneau najwvandijk coela YukaH daforerog czeller gupton Dax42 pcahan1 balajis dullhunk giovanni incovoma talponer medha1 wirawan joule bertelsen sanchezbuelna bakakaj GeschwindLab
	Bioconductor: an open source framework for bioinformatics and computational biology. [My Copy] Methods Enzymol, Vol. 411 (2006), pp. 119-134. by M. Reimers, V. J. Carey posted to bioconductor by zhouyu on 2008-05-10 04:13:32 as along with 4 people and 1 group renatomilani jeremymiller Gehrke sanchezbuelna GeschwindLab
	Mining microarray data at NCBI's Gene Expression Omnibus (GEO). [My Copy] Methods Mol Biol*, Vol. 338 (2006), pp. 175-190. by T. Barrett, R. Edgar posted to microarray by zhouyu on 2008-05-10 04:12:46 as along with 6 people giovenko guhjy frohike waszak hpiwowar ablejec
	Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package annotationTools [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Alexandre Kuhn, Ruth L. Carter, Mauro Delorenzi posted to microarray by zhouyu on 2008-05-10 04:09:34 as along with 13 people anf natstreet druvus guhjy jfr balicea dullhunk ghattem RamuAnandakrishnan heliopais ablejec bertelsen sanchezbuelna
	EzArray: a web-based highly automated Affymetrix expression array data management and analysis system. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by Yuerong Zhu, Yuelin Zhu, Wei Xu posted to microarray by zhouyu on 2008-05-10 04:08:11 as along with 8 people and 1 group daforerog songpku rdiaz Zephyrus guhjy cannin heliopais jfr Roswell Cancer Crosstalk
	MARS: microarray analysis, retrieval, and storage system. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by M. Maurer, R. Molidor, A. Sturn, et al.J. Hartler, H. Hackl, G. Stocker, A. Prokesch, M. Scheideler, Z. Trajanoski posted to microarray by zhouyu on 2008-05-10 04:07:25 as along with 1 person guhjy
	GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. [My Copy] Bioinformatics (12 May 2007) by Sean Davis, Paul S S. Meltzer posted to microarray by zhouyu on 2008-05-10 04:06:48 as along with 10 people and 1 group brianb dswan neils shikin guhjy jfr ugengma giovenko ablejec bertelsen Bioinformatics
	AMDA: an R package for the automated microarray data analysis [My Copy] BMC Bioinformatics, Vol. 7 (06 July 2006), 335. by Mattia Pelizzola, Norman Pavelka, Maria Foti, Paola Ricciardi-Castagnoli posted to microarray by zhouyu on 2008-05-10 04:05:41 as along with 2 people daforerog guhjy
	A novel representation of RNA secondary structure based on element-contact graphs [My Copy] BMC Bioinformatics, Vol. 9 (11 April 2008), 188. by Wenjie Shu, Xiaochen Bo, Zhiqiang Zheng, Shengqi Wang posted to rna by zhouyu on 2008-04-11 20:15:08 as
	BiskitA software platform for structural bioinformatics [My Copy] Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 769-770. by Grunberg, Raik, Nilges, Michael, Leckner, Johan posted to method by zhouyu on 2008-04-02 09:12:03 as
	Computing exact P-values for DNA motifs [My Copy] Bioinformatics, Vol. 23, No. 5. (1 March 2007), pp. 531-537. by Jing Zhang, Bo Jiang, Ming Li, John Tromp, Xuegong Zhang, Michael Q. Zhang posted to motif by zhouyu on 2008-04-02 09:11:32 as along with 3 people Dulce GustavoLacerda Ema
	Enrichment or depletion of a GO category within a class of genes: which test? [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 401-407. by Isabelle Rivals, Leon Personnaz, Lieng Taing, Marie-Claude Potier posted to go by zhouyu on 2008-04-02 09:11:05 as along with 12 people and 2 groups ipark-kaist phoenixzxl cisevol cmzmasek paszkows winterschlaefer guhjy ealloza grahamc capitall yas maralena BergmanLab BioinfoCIPF
	Multiple structural alignment and clustering of RNA sequences [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 926-932. by Elfar Torarinsson, Jakob H. Havgaard, Jan Gorodkin posted to alignment by zhouyu on 2008-04-02 09:08:15 as along with 11 people and 2 groups parnell rb_india zanexu Md_2007 marcius eckart_bindewald eweaver ppgardne ilh zwang dunnp BioinfoCIPF SGU-CIPF
	What is principal component analysis? [My Copy] Nature Biotechnology, Vol. 26, No. 3. (01 March 2008), pp. 303-304. by Markus Ringner posted to method by zhouyu on 2008-04-01 13:36:45 as along with 69 people and 3 groups singhsh Jporci tnhh ruvido ucbcjbm daforerog Diego_Prada abellogin nguizard thegoose2 arsyed Zephyrus flips svozil VGreiff kaniko ssgong Yanno guhjy operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega rsantana sobolevnrm fryanpan kengg rvosa dekay23 adacier hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 tharris ale mjoach HugoMarcelo jdiezperezj rrbarb Nici baker-group FAB-lab Bioinformatics
	Prediction and verification of microRNA targets by MovingTargets, a highly adaptable prediction method. [My Copy] BMC Genomics, Vol. 6, No. 1. (8 June 2005) by C. Burgler, P. M. Macdonald posted to microrna by zhouyu on 2008-04-01 09:37:56 as along with 4 people and 1 group mortenlindow pallacinka heliopais tauberj microRNA
	Weighted sequence motifs as an improved seeding step in microRNA target prediction algorithms. [My Copy] RNA, Vol. 11, No. 7. (July 2005), pp. 995-1003. by O. Saetrom, O. Snøve, P. Saetrom posted to microrna by zhouyu on 2008-04-01 09:13:38 as along with 2 people and 1 group mortenlindow heliopais microRNA