zimbo1's library 222 articles Export

	Visualizing the drug target landscape [My Copy] Drug Discovery Today (17 October 2009) by S. J. Campbell, A. Gaulton, J. Marshall, et al.D. Bichko, S. Martin, C. Brouwer, L. Harland posted to no-tag by zimbo1 on 2009-11-10 12:32:46 as
	No Electron Left Behind: A Rule-Based Expert System To Predict Chemical Reactions and Reaction Mechanisms [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 9. (28 September 2009), pp. 2034-2043. by Jonathan H. Chen, Pierre Baldi posted to transformation smirks rules recurring reactivity patterns elementary by zimbo1 on 2009-09-08 12:41:21 as along with 2 people and 1 group whitead npt11tpn Jiang Research Group
	Invariant pattern recognition using contourlets and AdaBoost [My Copy] Pattern Recognition (04 September 2009) by G. Y. Chen, B. Kégl posted to wavelets palmprint feature extraction contourlets classification adaboost by zimbo1 on 2009-09-08 09:21:36 as
	Orthogonal Variant Moments Features in Image Analysis [My Copy] Information Sciences (03 September 2009) by Martín, Matilde Santos, Javier de Lope posted to vision uncertainty tracking orthogonal object moments moment modeling invariants image computer by zimbo1 on 2009-09-08 09:17:46 as
	Figure mining for biomedical research [My Copy] Bioinformatics, Vol. 25, No. 16. (13 May 2009), pp. btp318-2084. by Rodriguez-Esteban Raul, Iossifov Ivan posted to texture svm sobel shape operators ocr mining lucene image by zimbo1 on 2009-08-28 16:02:03 as along with 5 people and 2 groups cisevol sobolevnrm robert85 kshameer guhjy BergmanLab Journal picks
	Concept-Based Semi-Automatic Classification of Drugs [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 8. (24 August 2009), pp. 1986-1992. by Harsha Gurulingappa, Corinna Kolářik, Martin Hofmann-Apitius, Juliane Fluck posted to therapeutic text systemic system substances research repurposing pharmacological medical machine learning information free features effects drug classification chemical atc anatomical by zimbo1 on 2009-08-18 08:05:26 as along with 3 people anthropomorphism sobolevnrm reyez
	MIA: A UIMA-Based Microarray Image Analysis System [My Copy] Multimedia Workshops, 2007. ISMW '07. Ninth IEEE International Symposium on In Multimedia Workshops, 2007. ISMW '07. Ninth IEEE International Symposium on (2007), pp. 85-86. by Wei-Bang Chen, Chengcui Zhang, Wen-Lin Liu, Richa Tiwari posted to analysis expression image levels microarray uima by zimbo1 on 2009-08-04 07:47:37 as
	Drug discovery chemistry: a primer for the non-specialist. [My Copy] Drug discovery today, Vol. 14, No. 15-16. (2 August 2009), pp. 731-744. by Allan M. Jordan, Stephen D. Roughley posted to common core functional groups multi-ring names nomenclature review scaffold scaffolds system terminology trivial by zimbo1 on 2009-08-03 09:24:12 as along with 4 people and 1 group richardbickerton pmung jerome jmccammon McCammon
	A Novel Feature Selection Approach for Biomedical Data Classification [My Copy] Journal of Biomedical Informatics (30 July 2009) by Yonghong Peng, Zhiqing Wu, Jianmin Jiang posted to biomedical classification data feature filter roc selection sffs wrapper by zimbo1 on 2009-08-03 08:44:15 as
	Effect of Input Differences on the Results of Docking Calculations [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 7. (27 July 2009), pp. 1704-1714. by Miklos Feher, Christopher I. Williams posted to accuracy conformation corina docking geometry input ligand poses sensitivity structure x-ray by zimbo1 on 2009-07-28 08:06:15 as along with 1 person ima
	Literature mining on pharmacokinetics numerical data: A feasibility study [My Copy] Journal of Biomedical Informatics, Vol. 42, No. 4. (1 August 2009), pp. 726-735. by Zhiping Wang, Seongho Kim, Sara K. Quinney, et al.Yingying Guo, Stephen D. Hall, Luis M. Rocha, Lang Li posted to clearance data entity extraction information linear midazolam mining mixed model pharmacokinetics recognition text by zimbo1 on 2009-07-27 14:30:11 as
	@Note: A workbench for Biomedical Text Mining [My Copy] Journal of Biomedical Informatics, Vol. 42, No. 4. (22 August 2009), pp. 710-720. by Anália Lourenço, Rafael Carreira, Sónia Carneiro, et al.Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha posted to annotation biomedical component-based curation development entity extraction information literature mining named recognition retrieval semantic software text by zimbo1 on 2009-07-27 14:28:36 as along with 6 people and 1 group kshameer liblab henk-cul guhjy dullhunk reyez dbmi-nlp
	GARD: A Generally Applicable Replacement for RMSD [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 8. (24 August 2009), pp. 1889-1900. by J. Christian Baber, David C. Thompson, Jason B. Cross, Christine Humblet posted to alignment binding deviation docking gard importance interpretation limitations measure normalization poses rmsd by zimbo1 on 2009-07-27 13:26:00 as along with 3 people and 1 group A_Coletta_Thesis nickolay reyez Structural Biology Group TorVergata
	e-PCP: A robust skew detection method for scanned document images [My Copy] Pattern Recognition (11 July 2009) by Prasenjit Dey, S. Noushath posted to correction coverings detection enhanced-pcp pcp piece-wise skew by zimbo1 on 2009-07-24 08:15:49 as
	A pseudo-skeletonization algorithm for static handwritten scripts [My Copy] International Journal on Document Analysis and Recognition, Vol. 12, No. 1. (1 May 2009), pp. 47-62. by Emli-Mari Nel, J. du Preez, B. Herbst posted to analysis and document processing pseudo skeleton skeletonization text thinning by zimbo1 on 2009-07-24 08:11:44 as
	A blackboard approach towards integrated Farsi OCR system [My Copy] International Journal on Document Analysis and Recognition, Vol. 12, No. 1. (1 May 2009), pp. 21-32. by Hossein Khosravi, Ehsanollah Kabir posted to approach blackboard farsi ocr persian recognition segmentation by zimbo1 on 2009-07-24 08:02:31 as
	On tables of contents and how to recognize them [My Copy] Journal International Journal on Document Analysis and Recognition, Vol. 12, No. 1. (May 2009), pp. 1-20. by Hervé Déjean, Jean-Luc Meunier posted to approach contents document functional learning machine of recognition structuring table by zimbo1 on 2009-07-24 07:56:14 as
	Docking Ligands into Flexible and Solvated Macromolecules. 4. Are Popular Scoring Functions Accurate for this Class of Proteins? [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 6. (22 June 2009), pp. 1568-1580. by Pablo Englebienne, Nicolas Moitessier posted to accuracy bridging chemscore complexes consensus drugscorecsd ehits flexibility function functions glidescore goldscore ligand molecules plp1 pose-prediction protein rankscore scoring water xscore by zimbo1 on 2009-07-23 13:01:57 as along with 1 person reyez
	Carborane Clusters in Computational Drug Design: A Comparative Docking Evaluation Using AutoDock, FlexX, Glide, and Surflex [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 6. (22 June 2009), pp. 1581-1589. by Rohit Tiwari, Kiran Mahasenan, Ryan Pavlovicz, Chenglong Li, Werner Tjarks posted to antifolates atoms autodock binding boron cancer carbon closo- efficient energies flexx glide hdhfr lack nido-carboranyl parameter replacement simple strategies surflex by zimbo1 on 2009-07-23 12:54:52 as along with 1 person reyez
	Handwritten document image segmentation into text lines and words [My Copy] Pattern Recognition (22 May 2009) by Vassilis Papavassiliou, Themos Stafylakis, Vassilis Katsouros, George Carayannis posted to document estimation handwritten image line machines processing segmentation support text vector viterbi word by zimbo1 on 2009-07-23 12:48:51 as
	Comparison of Several Molecular Docking Programs: Pose Prediction and Virtual Screening Accuracy [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 6. (22 June 2009), pp. 1455-1474. by Jason B. Cross, David C. Thompson, Brajesh K. Rai, et al.J. Christian Baber, Kristi Y. Fan, Yongbo Hu, Christine Humblet posted to accuracy auc based binding complexes dock docking dud effect expert families flexx glide icm knowledge ligand metric modeling modes molecular parameter phdock poses predicting protein roc screening significant structure surflex virtual x-ray by zimbo1 on 2009-07-23 12:47:08 as along with 1 person ima
	Devanagari OCR using a recognition driven segmentation framework and stochastic language models [My Copy] International Journal on Document Analysis and Recognition, Vol. 12, No. 2. (1 July 2009), pp. 123-138. by Suryaprakash Kompalli, Srirangaraj Setlur, Venu Govindaraju posted to automaton character classifier connected devanagari finite graph horizontally methodology n-gram ocr optical overlapping recognition representation segmentation state stochastic vertically by zimbo1 on 2009-07-23 12:35:16 as
	SVM-based hierarchical architectures for handwritten Bangla character recognition [My Copy] International Journal on Document Analysis and Recognition, Vol. 12, No. 2. (1 July 2009), pp. 97-108. by Tapan Bhowmik, Pradip Ghanty, Anandarup Roy, Swapan Parui posted to architectures bangla character classes fusion grouping handwritten hierarchical learning mlp of rbf recognition svm by zimbo1 on 2009-07-23 12:30:55 as
	Automated analysis of images in documents for intelligent document search [My Copy] International Journal on Document Analysis and Recognition, Vol. 12, No. 2. (1 July 2009), pp. 65-81. by Xiaonan Lu, Saurabh Kataria, William Brouwer, James Wang, Prasenjit Mitra, C. Giles posted to 2-d block data document extraction figure image plot search text by zimbo1 on 2009-07-23 12:28:00 as
	Comments on the Definition of the Q2 Parameter for QSAR Validation [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 7. (27 July 2009), pp. 1669-1678. by Viviana Consonni, Davide Ballabio, Roberto Todeschini posted to ability coefficient correlation evaluating external formula guidelines models oecd of prediction predictive q2 qsar squared squares sum validation by zimbo1 on 2009-07-23 12:24:53 as along with 4 people exciton carlosjavierna tbinbal alfons
	Use of Reduced Graphs To Encode Bioisosterism for Similarity-Based Virtual Screening [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 6. (22 June 2009), pp. 1330-1346. by Kristian Birchall, Valerie J. Gillet, Peter Willett, Pierre Ducrot, Claude Luttmann posted to based bioisosteric bioster database equivalence fragment graphs reduced scaffold-hopping screening similarity substructures virtual wombat by zimbo1 on 2009-07-23 12:20:10 as along with 1 person ima
	Comparison Data Sets for Benchmarking QSAR Methodologies in Lead Optimization [My Copy] Journal of Chemical Information and Modeling, Vol. 0, No. 0. (0000) by Ruchi R. Mittal, Ross A. Mckinnon, Michael J. Sorich posted to 2d 3d 40 ability benchmark data diverse lead optimization predictive qsar set by zimbo1 on 2009-07-20 09:23:13 as along with 1 person carlosjavierna
	Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1944-1951. by Shanfeng Zhu, Jia Zeng, Hiroshi Mamitsuka posted to clustering content document medline mesh model similarity space thesaurus vector word by zimbo1 on 2009-07-20 09:13:45 as along with 7 people and 1 group artaban421 sobolevnrm lmichan ollieredfernwork dullhunk nuin Gaetan Orengo Group Journal Picks
	Differential Sensitivity and Mechanism of Inhibition of COX-2 Oxygenation of Arachidonic Acid and 2-Arachidonoylglycerol by Ibuprofen and Mefenamic Acid [My Copy] Biochemistry, Vol. 48, No. 31. (11 August 2009), pp. 7353-7355. by Jeffery J. Prusakiewicz, Kelsey C. Duggan, Carol A. Rouzer, Lawrence J. Marnett posted to competitive cox2 cyclooxygenase-2 inhibitor by zimbo1 on 2009-07-20 09:04:49 as
	Mining Protein-Protein Interactions from Published Literature Using Linguamatics I2E. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 563 (2009), pp. 3-13. by J. Bandy, D. Milward, S. McQuay posted to - discovery extraction i2e information interactions knowledge language linguamatics linguistics literature medline mining natural nlp processing proteinprotein text by zimbo1 on 2009-07-17 10:58:45 as along with 1 person and 1 group henk-cul dbmi-nlp
	Virtual Exploration of the Chemical Universe up to 11 Atoms of C, N, O, F: Assembly of 26.4 Million Structures (110.9 Million Stereoisomers) and Analysis for New Ring Systems, Stereochemistry, Physicochemical Properties, Compound Classes, and Drug Discovery [My Copy] Journal of Chemical Information and Modeling, Vol. 47, No. 2. (1 March 2007), pp. 342-353. by Tobias Fink, Jean-Louis Reymond posted to aromaticity chemical construction database generation kohonen maps stability structure tautomers by zimbo1 on 2009-07-16 11:46:20 as along with 2 people sschurer jerome_ucsf_slb
	Mapping Adverse Drug Reactions in Chemical Space [My Copy] Journal of Medicinal Chemistry, Vol. 52, No. 9. (14 May 2009), pp. 3103-3107. by Josef Scheiber, Jeremy L. Jenkins, Sai C. Sukuru, et al.Andreas Bender, Dmitri Mikhailov, Mariusz Milik, Kamal Azzaoui, Steven Whitebread, Jacques Hamon, Laszlo Urban, Meir Glick, John W. Davies posted to adverse biology chemical drug reactions space systems by zimbo1 on 2009-06-26 15:28:33 as along with 2 people sschurer reyez
	Combining feature spaces for classification [My Copy] Pattern Recognition (16 April 2009) by Theodoros Damoulas, Mark A. Girolami posted to approximation bayes bayesian classification combination ensemble hierarchical inference information integration kernel learning modelling multi-modal multiclass variational by zimbo1 on 2009-06-26 15:25:51 as
	Brought to life: targeted activation of enzyme function with small molecules [My Copy] Journal of Chemical Biology by Anthony Bishop, Vincent Chen posted to activation allosteric-activation allostery chemical dimerization enzyme flash function genetics inducers kinases molecules protein sites small by zimbo1 on 2009-06-19 09:31:46 as
	Interactive text mining with Pipeline Pilot: a bibliographic web-based tool for PubMed. [My Copy] Infectious disorders drug targets, Vol. 9, No. 3. (June 2009), pp. 366-374. by S. G. Vellay, N. E. Latimer, G. Paillard posted to mining pilot pipeline pubmed text by zimbo1 on 2009-06-19 09:22:05 as along with 2 people guhjy Gaetan
	Computer storage and retrieval of generic chemical structures in patents. 6. An interpreter program for the generic structure description language GENSAL [My Copy] Journal of Chemical Information and Computer Sciences, Vol. 24, No. 2. (1 May 1984), pp. 66-71. by John M. Barnard, Michael F. Lynch, Stephen M. Welford posted to block-cutpoint chemical extended generic gensal patent retrieval structure tree by zimbo1 on 2009-06-18 09:45:57 as along with 1 person N-te_Jr
	Natural Products as Sources of New Drugs over the Last 25 Years⊥ [My Copy] Journal of Natural Products, Vol. 70, No. 3. (1 March 2007), pp. 461-477. by David J. Newman, Gordon M. Cragg posted to chemical drug entity mimic natural nce new product by zimbo1 on 2009-06-15 15:50:32 as along with 1 person and 2 groups Flit biodiversity_conservation Global_biodiversity_model
	Targeted scoring functions for virtual screening [My Copy] Drug Discovery Today, Vol. 14, No. 11-12. (05 June 2009), pp. 562-569. by Markus H. J. Seifert posted to docking functions learning ligand machine optimization protein scoring by zimbo1 on 2009-04-17 12:44:55 as along with 3 people JALumley sschurer Scis0000002
	Creating reference datasets for systems biology applications using text mining. [My Copy] Annals of the New York Academy of Sciences, Vol. 1158, No. 1. (March 2009), pp. 14-28. by Martin Krallinger, Ana Maria M. Rojas, Alfonso Valencia posted to biology categorization evaluation high-throughput mining systems text by zimbo1 on 2009-04-16 08:05:09 as along with 3 people and 1 group lmichan liblab henk-cul dbmi-nlp
	Structure-Based Approach to the Development of Potent and Selective Inhibitors of Dihydrofolate Reductase from Cryptosporidium [My Copy] Journal of Medicinal Chemistry, Vol. 51, No. 21. (13 November 2008), pp. 6839-6852. by David B. Bolstad, Erin S. Bolstad, Kathleen M. Frey, Dennis L. Wright, Amy C. Anderson posted to cryptosporidiosis dihydrofolate malaria reductase by zimbo1 on 2009-04-16 08:01:51 as
	Highly Efficient Ligands for Dihydrofolate Reductase from Cryptosporidium hominis and Toxoplasma gondii Inspired by Structural Analysis [My Copy] Journal of Medicinal Chemistry, Vol. 50, No. 5. (1 March 2007), pp. 940-950. by Phillip M. Pelphrey, Veljko M. Popov, Tammy M. Joska, et al.Jennifer M. Beierlein, Erin S. Bolstad, Yale A. Fillingham, Dennis L. Wright, Amy C. Anderson posted to dihydrofolate linker malaria propargyl-based reductase by zimbo1 on 2009-04-16 08:00:20 as
	Malaria-Infected Mice Are Cured by a Single Oral Dose of New Dimeric Trioxane Sulfones Which Are Also Selectively and Powerfully Cytotoxic to Cancer Cells [My Copy] Journal of Medicinal Chemistry, Vol. 52, No. 4. (26 February 2009), pp. 1198-1203. by Andrew S. Rosenthal, Xiaochun Chen, Jun O. Liu, et al.Diana C. West, Paul J. Hergenrother, Theresa A. Shapiro, Gary H. Posner posted to artemisinin dimeric malaria sulfones trioxane by zimbo1 on 2009-04-16 07:59:19 as
	A Novel In Silico Approach to Drug Discovery via Computational Intelligence [My Copy] Journal of Chemical Information and Modeling, Vol. 0, No. 0. (0000) by David Hecht, Gary B. Fogel posted to affinities binding calculated dhfr diversity docking space synthetically unfeasible by zimbo1 on 2009-04-16 07:58:26 as along with 3 people Scis0000002 sschurer middledomain
	Potent, Plasmodium-Selective Farnesyltransferase Inhibitors That Arrest the Growth of Malaria Parasites: Structure−Activity Relationships of Ethylenediamine-Analogue Scaffolds and Homology Model Validation [My Copy] Journal of Medicinal Chemistry, Vol. 51, No. 17. (11 September 2008), pp. 5176-5197. by Steven Fletcher, Christopher G. Cummings, Kasey Rivas, et al.William P. Katt, Carrie Hornéy, Frederick S. Buckner, Debopam Chakrabarti, Saïd M. Sebti, Michael H. Gelb, Wesley C. Van Voorhis, Andrew D. Hamilton posted to ethylenediamine farnesyltransferase malaria protein scaffold by zimbo1 on 2009-04-16 07:58:08 as
	Synthesis and Structure–Activity Relationships of 4-Pyridones as Potential Antimalarials [My Copy] Journal of Medicinal Chemistry, Vol. 51, No. 9. (1 May 2008), pp. 2845-2852. by Clive L. Yeates, John F. Batchelor, Edward C. Capon, et al.Neil J. Cheesman, Mitch Fry, Alan T. Hudson, Mary Pudney, Helen Trimming, James Woolven, José M. Bueno, Jesús Chicharro, Esther Fernández, José M. Fiandor, Domingo Gargallo-Viola, Gómez, Esperanza Herreros, María L. León posted to 4-pyridones anticoccidial clopidol drug electron malaria mitochondrial transport by zimbo1 on 2009-04-16 07:57:00 as
	Antimalarial Dual Drugs Based on Potent Inhibitors of Glutathione Reductase from Plasmodium falciparum [My Copy] Journal of Medicinal Chemistry, Vol. 51, No. 5. (1 March 2008), pp. 1260-1277. by Wolfgang Friebolin, Beate Jannack, Nicole Wenzel, et al.Julien Furrer, Thomas Oeser, Cecilia P. Sanchez, Michael Lanzer, Vanessa Yardley, Katja Becker, Elisabeth Davioud-Charvet posted to 4-aminoquinoline antioxidant chloroquine core malaria transporter by zimbo1 on 2009-04-16 07:55:34 as
	Beyond the Virtual Screening Paradigm: Structure-Based Searching for New Lead Compounds [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 4. (27 April 2009), pp. 800-809. by Jochen Schlosser, Matthias Rarey posted to constraint database descriptor docking index triangle trixx by zimbo1 on 2009-04-16 07:46:26 as along with 1 person Scis0000002
	Rational and Modular Design of Potent Ligands Targeting the RNA that Causes Myotonic Dystrophy 2 [My Copy] ACS Chemical Biology, Vol. 0, No. ja. (0000) by Matthew D. Disney, Alexei Pushechnikov, Melissa M. Lee posted to binder complex hairpin ligand motif rna rna-protein by zimbo1 on 2009-04-15 16:20:59 as
	Identifying conformational changes of the β2 adrenoceptor that enable accurate prediction of ligand/receptor interactions and screening for GPCR modulators [My Copy] Journal of Computer-Aided Molecular Design by Kimberly Reynolds, Vsevolod Katritch, Ruben Abagyan posted to 2 adrenoceptor agonist gpcr homology ligand mmff model screening virtual by zimbo1 on 2009-04-15 16:16:04 as along with 1 person LamBras
	Scoring confidence index: statistical evaluation of ligand binding mode predictions [My Copy] Journal of Computer-Aided Molecular Design by Maria Zavodszky, Andrew Stumpff-Kane, David Lee, Michael Feig posted to binding correlation-based docking energy function landscape orientation protein-ligand score scoring by zimbo1 on 2009-04-15 16:13:56 as

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web	1
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word-spotting	1
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wrapper	1
wsdl	1
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