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protein	359
influenza	254
structure	199
evolution	193
interaction	182
virus	158
network	133
prediction	109
rna	94
genome	77
yeast	61
domain	60
sequence	59
gene	54
complex	47
phylogeny	43
transcription	34
rnasep	34
co-evolution	32
polymerase	31
binding	30
avian	30
dynamics	29
mutation	28
genome-wide	27
folding	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	22
alignment	20
regulatory	19
site	19
clustering	19
modeling	19
human	18
antibody	17
eukaryota	17
regulation	16
genetic	15
function	15
fluorescent	14
design	14
residue	13
drug	13
synthetic	13
metabolism	12
bayesian	12
epitope	11
immunity	11
interface	10
pathway	10
promoter	10
microarray	10
algorithm	10
massspectrometry	9
peptide	8
hiv	8
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ecoli	8
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y2h	7
invivo	7
computational	7
review	7
bioinformatics	7
systematic	6
system	6
specy	6
hostspecialization	6
chromatin	6
disease	5
swine	5
annotation	5
insilico	5
phosphorylation	5
visualization	5
homology	5
prokaryote	5
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mammal	5
fret	5
subunit	5
nmr	5
geneexpression	5
selection	5
architecture	4
svm	4
em	4
localization	4
module	4
nuclear	4
divergence	4
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rule	4
membrane	4
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surface	4
proteomics	4
purification	4
histone	4
assembly	4
microrna	4
genetics	4
ortholog	4
ncrna	4
experiment	4
secondary	3
genefamily	3
translation	3
biofuel	3
reassortment	3
np	3
ysd	3
methylation	3
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m2	3
science	3
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cancer	3
immune	3
protocol	3
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archaea	3
coil	3
element	3
cellcycle	3
research	3
contact	3
neural	2
epistasis	2
ribozyme	2
phylogeography	2
primer	2
cooccurrence	2
information-theory	2
hub	2
bret	2
fitness	2
stability	2
chaperone	2
bootstrap	2
web	2
comparativegenomics	2
target	2
homologymodeling	2
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mi	2
database	2
bifc	2
technique	2
linker	2
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mp	2
ns	2
cloning	2
molecularrecognition	2
docking	2
model	2
chromosome	2
mhc	2
inhibition	2
mathematic	2
singlemolecule	2
endogenous	2
positiveselection	2
viability	2
presentation	2
positiveepistasis	1
cpg-island	1
sequencing	1
degradation	1
vesicle	1
emulation	1
tlr	1
coevolution	1
oral	1
sampling	1
compensatory	1
reverse-engineering	1
statistical	1
clade	1
generegulation	1
co-extinction	1
detection	1
nanoscale	1
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threading	1
noise	1
ribosome	1
mrp	1
nature	1
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hmm	1
social	1
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invitro	1
geneontology	1
tap	1
theory	1
video	1
differentiation	1
nanopore	1
immunohistochemistry	1
singlecell	1
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pca	1
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similarity	1
hgt	1
ecology	1
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enzyme	1
culture	1
qtl	1
pathobiology	1
integration	1
terminator	1