zwang's co-evolution [32 articles] Export

Recent papers added to zwang's library classified by the tag co-evolution. You can also see everyone's co-evolution.

	Using a mutual information-based site transition network to map the genetic evolution of influenza A/H3N2 virus. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 18. (15 September 2009), pp. 2309-2317. by Zhen Xia, Gulei Jin, Jun Zhu, Ruhong Zhou posted to influenza co-evolution by zwang on 2009-08-29 12:22:25 as along with 3 people marywaye phoenixzxl druvus
	A new method for revealing correlated mutations under the structural and functional constraints in proteins [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2506-2513. by Byung-Chul Lee, Dongsup Kim posted to co-evolution protein structure by zwang on 2009-07-24 12:12:54 as along with 5 people RebeccaHamer qluo jlike operon phoenixzxl
	Prediction of protein-protein interactions: a study of the co-evolution model. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 541 (2009), pp. 61-88. by Itai Sharon, Jason V. Davis, Golan Yona posted to co-evolution interaction prediction protein by zwang on 2009-06-30 09:20:42 as along with 3 people chica kgutwin phoenixzxl
	Co-evolution positions and rules for antigenic variants of human influenza A/H3N2 viruses [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 1. (2009) by Jhang W. Huang, Chwan C. King, Jinn M. Yang posted to co-evolution influenza virus by zwang on 2009-03-02 04:08:11 as
	Combining mutual information with structural analysis to screen for functionally important residues in influenza hemagglutinin. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2009), pp. 492-503. by P. M. Kasson, V. S. Pande posted to co-evolution hemagglutinin influenza mi residue structure by zwang on 2009-02-16 03:11:04 as
	Correlated Evolution of Interacting Proteins: Looking Behind the Mirrortree [My Copy] Journal of Molecular Biology, Vol. 385, No. 1. (09 January 2009), pp. 91-98. by M. Kann, B. Shoemaker, A. Panchenko, T. Przytycka posted to co-evolution interaction protein by zwang on 2008-12-30 06:07:02 as along with 11 people and 2 groups mgomes biomcgary chica druvus sobolevnrm mhofree grahamc barry marti reyez paulschlesinger baker-group Bioinformatics
	Protein co-evolution, co-adaptation and interactions [My Copy] The EMBO Journal posted to co-evolution interaction by zwang on 2008-10-28 13:41:44 as along with 1 person phoenixzxl
	Co-evolving stability and conformational homogeneity of the human adenosine A 2a receptor [My Copy] posted to co-evolution by zwang on 2008-08-07 13:53:59 as
	Coevolution at protein complex interfaces can be detected by the complementarity trace with important impact for predictive docking [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 22. (3 June 2008), pp. 7708-7713. by Hocine Madaoui, RaphaÃ«l Guerois posted to co-evolution interaction interface prediction structure by zwang on 2008-08-06 07:42:22 as along with 8 people dfdong qluo robfsouza RebeccaHamer orr cabbagesofdoom phoenixzxl bicko
	Analysis of the residue-residue coevolution network and the functionally important residues in proteins [My Copy] posted to co-evolution network protein residue by zwang on 2008-08-01 03:26:42 as along with 1 person friendpine
	Coordinated evolution of the hepatitis C virus — PNAS [My Copy] posted to co-evolution evolution by zwang on 2008-07-16 09:27:03 as
	Correlated substitution analysis and the prediction of amino acid structural contacts [My Copy] Brief Bioinform (13 November 2007), bbm052. by David S. Horner, Walter Pirovano, Graziano Pesole posted to co-evolution contact prediction structure substitution by zwang on 2008-03-20 13:25:08 as along with 6 people and 3 groups mgomes qluo RebeccaHamer barry sobolevnrm Lombardo_7 structural_bioinformatics Bioinformatics baker-group
	Coevolution of gene families in prokaryotes [My Copy] Genome Res., Vol. 18, No. 3. (1 March 2008), pp. 462-468. by Otto X. Cordero, Berend Snel, Paulien Hogeweg posted to co-evolution genefamily prokaryote by zwang on 2008-03-03 04:30:21 as along with 2 people operon neils
	Co-evolution and co-adaptation in protein networks. [My Copy] FEBS letters, Vol. 582, No. 8. (9 April 2008), pp. 1225-1230. by D. Juan, F. Pazos, A. Valencia posted to co-evolution network protein by zwang on 2008-02-22 13:06:04 as along with 3 people and 1 group biomcgary phoenixzxl smgomez GomezLab
	The coevolution of choosiness and cooperation [My Copy] Nature, Vol. 451, No. 7175. (10 January 2008), pp. 189-192. by John M. Mcnamara, Zoltan Barta, Lutz Fromhage, Alasdair I. Houston posted to co-evolution by zwang on 2008-01-10 01:40:09 as along with 3 people and 1 group gennaro adriandefroment jasonn LABSS
	A Study of the Coevolutionary Patterns Operating within the env Gene of the HIV-1 Group M Subtypes [My Copy] Mol Biol Evol, Vol. 24, No. 12. (1 December 2007), pp. 2787-2801. by Simon A. Travers, Damien C. Tully, Grace P. Mccormack, Mario A. Fares posted to co-evolution virus by zwang on 2007-12-20 03:53:33 as
	The genetic basis of a plant insect coevolutionary key innovation [My Copy] Proceedings of the National Academy of Sciences (11 December 2007), 0706229104. by Christopher W. Wheat, Heiko Vogel, Ute Wittstock, Michael F. Braby, Dessie Underwood, Thomas Mitchell-Olds posted to co-evolution genetic by zwang on 2007-12-12 07:50:21 as
	Detecting coevolution in and among protein domains. [My Copy] PLoS computational biology, Vol. 3, No. 11. (1 November 2007), e211. by Chen-Hsiang H. Yeang, David Haussler posted to co-evolution domain prediction protein by zwang on 2007-12-10 04:24:46 as along with 13 people and 1 group dfdong martainn balicea skhadar sobolevnrm niallhaslam hpaces mingzhi Ema phoenixzxl penpen926 friendpine pradiptaray baker-group
	Co-evolving residues in membrane proteins [My Copy] Bioinformatics, Vol. 23, No. 24. (15 December 2007), pp. 3312-3319. by Angelika Fuchs, Antonio J. Martin-Galiano, Matan Kalman, Sarel Fleishman, Nir Ben-Tal, Dmitrij Frishman posted to co-evolution membrane protein residue by zwang on 2007-12-10 03:52:09 as along with 7 people and 2 groups qluo operon breden cjeans blasco_morozzo phoenixzxl Lombardo_7 SFUAntibodyResearch signal-duplication
	Detecting Coevolution in and among Protein Domains [My Copy] PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e211. by Chen-Hsiang Yeang, David Haussler posted to co-evolution domain prediction protein by zwang on 2007-11-03 03:07:56 as along with 1 person cjeans
	The Origins of Specificity in Polyketide Synthase Protein Interactions [My Copy] PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e186. by Mukund Thattai, Yoram Burak, Boris I. Shraiman posted to co-evolution interaction protein by zwang on 2007-11-02 08:09:28 as along with 2 people phoenixzxl marck
	Coevolution of a Homing Endonuclease and Its Host Target Sequence [My Copy] Journal of Molecular Biology, Vol. 372, No. 5. (5 October 2007), pp. 1305-1319. by Michelle Scalley-Kim, Audrey Mcconnell-Smith, Barry L. Stoddard posted to co-evolution protein sequence by zwang on 2007-11-01 07:33:43 as
	Interaction Intimacy Affects Structure and Coevolutionary Dynamics in Mutualistic Networks [My Copy] Current Biology, Vol. 17, No. 20. (23 October 2007), pp. 1797-1803. by Guimaraes, Victor Rico-Gray, Paulo S. Oliveira, Thiago J. Izzo, Dos, John N. Thompson posted to co-evolution dynamics interaction network structure by zwang on 2007-10-25 08:06:40 as
	Analysis on multi-domain cooperation for predicting protein-protein interactions [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Rui S. Wang, Yong Wang, Ling Y. Wu, Xiang S. Zhang, Luonan Chen posted to co-evolution domain interaction prediction protein by zwang on 2007-10-22 01:55:10 as along with 2 people guhjy phoenixzxl
	Detecting the Coevolution in and among Protein Domains [My Copy] PLoS Computational Biology, Vol. preprint, No. 2007. (1 September 2007), e211.eor. by Chen-Hsiang Yeang, David Haussler posted to co-evolution domain protein by zwang on 2007-09-22 08:05:24 as
	Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution [My Copy] Nature, Vol. 449, No. 7158., pp. 83-86. by Debbie Lindell, Jacob D. Jaffe, Maureen L. Coleman, et al.Matthias E. Futschik, Ilka M. Axmann, Trent Rector, Gregory Kettler, Matthew B. Sullivan, Robert Steen, Wolfgang R. Hess, George M. Church, Sallie W. Chisholm posted to co-evolution genome-wide by zwang on 2007-09-06 15:07:45 as along with 2 people dayjm mellabee
	Global diversity and evidence for coevolution of KIR and HLA [My Copy] Nature Genetics, Vol. 39, No. 9. (12 August 2007), pp. 1114-1119. by Richard M. Single, Maureen P. Martin, Xiaojiang Gao, et al.Diogo Meyer, Meredith Yeager, Judith R. Kidd, Kenneth K. Kidd, Mary Carrington posted to co-evolution diversity by zwang on 2007-08-31 16:23:04 as
	Evolutionary Explanations for Cooperation [My Copy] Current Biology, Vol. 17, No. 16. (21 August 2007), pp. R661-R672. by Stuart A. West, Ashleigh S. Griffin, Andy Gardner posted to co-evolution evolution by zwang on 2007-08-25 03:57:39 as along with 6 people jmaddi jagarciag niallhaslam dbikard testa HugoMarcelo
	Crystal Structure of an Ancient Protein: Evolution by Conformational Epistasis [My Copy] Science (16 August 2007), 1142819. by Eric A. Ortlund, Jamie T. Bridgham, Matthew R. Redinbo, Joseph W. Thornton posted to co-evolution epistasis evolution mutation protein structure by zwang on 2007-08-18 08:37:30 as along with 4 people and 1 group bicko dpollard csjonline ramensky EisenLab
	Specificity in protein interactions and its relationship with sequence diversity and coevolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 19. (8 May 2007), pp. 7999-8004. by Luke Hakes, Simon C. Lovell, Stephen G. Oliver, David L. Robertson posted to co-evolution diversity interaction protein sequence by zwang on 2007-05-09 07:25:09 as along with 14 people and 2 groups mgomes chica diamantis dullhunk marti stevanspringer bjorns cjeans Garamonfok cursonivel1 tale winterschlaefer phoenixzxl chrys FAB-lab cursonivel1
	Predicting protein domain interactions from coevolution of conserved regions [My Copy] by Maricel posted to co-evolution domain interaction prediction protein by zwang on 2007-03-30 08:39:51 as
	The co-evolutionary genetics of ecological communities [My Copy] Nature Reviews Genetics, Vol. 8, No. 3. (06 February 2007), pp. 185-195. by Michael J. Wade posted to co-evolution ecology by zwang on 2007-03-19 13:38:29 as along with 3 people maren echinotrix kathrynmrobinson

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protein	358
influenza	248
structure	197
evolution	189
interaction	182
virus	155
network	132
prediction	109
rna	89
genome	77
domain	60
yeast	60
sequence	59
gene	54
complex	47
phylogeny	43
transcription	34
rnasep	33
co-evolution	32
avian	30
binding	30
dynamics	29
polymerase	29
mutation	28
folding	27
genome-wide	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	21
alignment	20
clustering	19
modeling	19
regulatory	19
site	19
human	18
antibody	17
eukaryota	17
regulation	16
function	15
genetic	15
design	14
fluorescent	14
drug	13
residue	13
synthetic	13
bayesian	12
metabolism	12
epitope	11
immunity	11
interface	10
microarray	10
pathway	10
promoter	10
algorithm	9
massspectrometry	9
diversity	8
ecoli	8
hiv	8
peptide	8
phenotype	8
bioinformatics	7
computational	7
invivo	7
replication	7
review	7
vaccine	7
y2h	7
chromatin	6
hostspecialization	6
specy	6
system	6
systematic	6
annotation	5
disease	5
fret	5
geneexpression	5
homology	5
insilico	5
mammal	5
nmr	5
phosphorylation	5
prokaryote	5
selection	5
substitution	5
subunit	5
swine	5
visualization	5
antigen	4
architecture	4
assembly	4
divergence	4
em	4
experiment	4
genetics	4
hierarchical	4
histone	4
localization	4
membrane	4
microrna	4
module	4
ncrna	4
nuclear	4
ortholog	4
proteomics	4
purification	4
rule	4
surface	4
svm	4
archaea	3
biofuel	3
cancer	3
cellcycle	3
coil	3
contact	3
deletion	3
element	3
genefamily	3
immune	3
m2	3
methylation	3
np	3
profile	3
protocol	3
reassortment	3
research	3
science	3
secondary	3
simulation	3
translation	3
ysd	3
accuracy	2
bifc	2
bootstrap	2
bret	2
chaperone	2
chromosome	2
cloning	2
comparativegenomics	2
cooccurrence	2
database	2
docking	2
endogenous	2
epistasis	2
fitness	2
homologymodeling	2
hub	2
information-theory	2
inhibition	2
likelihood	2
linker	2
mathematic	2
mhc	2
mi	2
molecularrecognition	2
mp	2
neural	2
ns	2
phylogeography	2
positiveselection	2
presentation	2
primer	2
ribozyme	2
singlemolecule	2
stability	2
target	2
technique	2
viability	2
web	2
bsi	1
clade	1
coevolution	1
co-extinction	1
collaboration	1
compensatory	1
confidence	1
counter	1
cpg-island	1
culture	1
degradation	1
detection	1
differentiation	1
duplication	1
ecology	1
emulation	1
enzyme	1
epigenetics	1
fuck	1
geneontology	1
generegulation	1
hgt	1
hla	1
hmm	1
immunohistochemistry	1
inhibitor	1
integration	1
invitro	1
lgt	1
magnetic	1
marker	1
model	1
morphological	1
mrp	1
nanopore	1
nanoscale	1
nature	1
neoselection	1
noise	1
oligonucleotide	1
oral	1
pathobiology	1
pca	1
plant	1
positiveepistasis	1
protection	1
qtl	1
reliability	1
reverse-engineering	1
ribosome	1
sampling	1
sequencing	1
similarity	1
singlecell	1
sites	1
social	1
speciation	1
statistical	1
strain	1
substrate_recognition	1
tag	1
tap	1
terminator	1
text-mining	1
theory	1
threading	1
tissue	1
tlr	1
transmembrane	1
trna	1
vesicle	1
video	1

zwang's co-evolution [32 articles] Export

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