zwang's evolution [189 articles] Export

Recent papers added to zwang's library classified by the tag evolution. You can also see everyone's evolution.

	The role of genomics in tracking the evolution of influenza A virus. [My Copy] PLoS pathogens, Vol. 5, No. 10. (26 October 2009), e1000566. by Alice Carolyn C. McHardy, Ben Adams posted to influenza evolution by zwang on 2009-11-10 10:36:10 as
	Genome evolution and adaptation in a long-term experiment with Escherichia coli. [My Copy] Nature, Vol. 461, No. 7268. (29 October 2009), pp. 1243-1247. by Jeffrey E. Barrick, Dong Su S. Yu, Sung Ho H. Yoon, et al.Haeyoung Jeong, Tae Kwang K. Oh, Dominique Schneider, Richard E. Lenski, Jihyun F. Kim posted to evolution ecoli by zwang on 2009-11-10 10:33:23 as along with 26 people and 4 groups kintoki jasontsai aaltenburger sawasthi nurban josepe tjandra venancio maren qayub Garamonfok yyfwuhan Asclepius dbikard nzm jjray djkt treangen lp2 codonusage operon diamantis michaelbarton druvus DrRichardBadge richardfranzese Pedro Martinez EvoDevo lab Barcelona iSEEM Journal picks BergmanLab
	The comparative genomics of viral emergence [My Copy] Proceedings of the National Academy of Sciences (26 October 2009) by Edward C. Holmes posted to genome evolution by zwang on 2009-11-10 10:32:34 as
	Genomes as documents of evolutionary history [My Copy] Trends in Ecology & Evolution (31 October 2009) by Bastien Boussau, Vincent Daubin posted to genome evolution by zwang on 2009-11-06 10:23:55 as
	Antigenic Diversity, Transmission Mechanisms, and the Evolution of Pathogens [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (16 October 2009), e1000536. by Alexander Lange, Neil M. Ferguson posted to evolution diversity antigen by zwang on 2009-11-03 08:27:29 as along with 3 people vdquynh namcdf maren
	Clustering of protein domains for functional and evolutionary studies. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 335. by Pavle Goldstein, Jurica Zucko, Dusica Vujaklija, et al.Anita Krisko, Daslav Hranueli, Paul F. Long, Catherine Etchebest, Bojan Basrak, John Cullum posted to protein evolution domain clustering by zwang on 2009-10-19 09:07:40 as along with 5 people and 2 groups sillitoe kshameer druvus ppgardne phoenixzxl Orengo Group Journal Picks Journal picks
	Beyond directed evolution: Darwinian selection as a tool for synthetic biology [My Copy] Systems and Synthetic Biology by Manuel Porcar posted to synthetic evolution by zwang on 2009-10-14 04:02:30 as
	An epistatic ratchet constrains the direction of glucocorticoid receptor evolution [My Copy] Nature, Vol. 461, No. 7263. (24 September 2009), pp. 515-519. by Jamie T. Bridgham, Eric A. Ortlund, Joseph W. Thornton posted to evolution by zwang on 2009-09-28 12:49:13 as along with 9 people and 1 group venancio merpublic docv bpcusack cmzmasek jjray stajich Annab stevanspringer Mycology
	A genome-wide view of Caenorhabditis elegans base-substitution mutation processes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 38. (22 September 2009), pp. 16310-16314. by Dee R. Denver, Peter C. Dolan, Larry J. Wilhelm, et al.Way Sung, J. Ignacio Lucas-Lledó, Dana K. Howe, Samantha C. Lewis, Kazu Okamoto, W. Kelley Thomas, Michael Lynch, Charles F. Baer posted to mutation genome-wide evolution by zwang on 2009-09-24 08:21:50 as along with 4 people and 1 group cisevol operon maren bpcusack BergmanLab
	Universal features in the genome-level evolution of protein domains. [My Copy] Genome biology, Vol. 10, No. 1. (30 January 2009), R12. by Marco Cosentino Lagomarsino, Alessandro L. Sellerio, Philip D. Heijning, Bruno Bassetti posted to protein genome evolution domain by zwang on 2009-09-04 08:53:22 as along with 7 people docv phoenixzxl djkt idoerg VGreiff grahamc pawelszczesny
	Protein Sectors: Evolutionary Units of Three-Dimensional Structure [My Copy] posted to structure evolution by zwang on 2009-08-25 09:41:22 as along with 1 person phoenixzxl
	Viral Resistance Evolution Fully Escapes a Rationally Designed Lethal Inhibitor [My Copy] Mol Biol Evol, Vol. 26, No. 9. (1 September 2009), pp. 2041-2046. by Thomas E. Keller, Ian J. Molineux, James J. Bull posted to evolution by zwang on 2009-08-17 11:46:09 as along with 1 person renatomilani
	Programming cells by multiplex genome engineering and accelerated evolution [My Copy] Nature, Vol. 460, No. 7257. (26 July 2009), pp. 894-898. by Harris H. Wang, Farren J. Isaacs, Peter A. Carr, et al.Zachary Z. Sun, George Xu, Craig R. Forest, George M. Church posted to genome evolution by zwang on 2009-08-13 05:05:03 as along with 13 people and 2 groups abhishek_tiwari TorstenWaldminghaus jdoconnell dswan Annab badi druvus dayjm pkonings phoenixzxl biomcgary djkt dbikard Journal picks Synthetic Biology
	Darwinian selection for sites of Asn-linked glycosylation in phylogenetically disparate eukaryotes and viruses [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 32. (11 August 2009), pp. 13421-13426. by Jike Cui, Temple Smith, Phillips W. Robbins, John Samuelson posted to virus evolution eukaryota by zwang on 2009-08-13 04:23:41 as along with 1 person bpcusack
	Genetic architecture of complex traits: Large phenotypic effects and pervasive epistasis [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 50. (16 December 2008), pp. 19910-19914. by Haifeng Shao, Lindsay C. Burrage, David S. Sinasac, et al.Annie E. Hill, Sheila R. Ernest, William O'Brien, Hayden-William Courtland, Karl J. Jepsen, Andrew Kirby, E. J. Kulbokas, Mark J. Daly, Karl W. Broman, Eric S. Lander, Joseph H. Nadeau posted to evolution by zwang on 2009-08-13 04:18:40 as along with 4 people and 1 group turnersd daveGerrard dpollard lp2 RockmanLab
	High frequency of hotspot mutations in core genes of Escherichia coli due to short-term positive selection. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 30. (15 July 2009), pp. 12412-12417. by Sujay Chattopadhyay, Scott J. Weissman, Vladimir N. Minin, Thomas A. Russo, Daniel E. Dykhuizen, Evgeni V. Sokurenko posted to evolution positiveselection by zwang on 2009-07-30 12:40:48 as along with 2 people jasontsai jjray
	INDELible: A Flexible Simulator of Biological Sequence Evolution [My Copy] Mol Biol Evol, Vol. 26, No. 8. (1 August 2009), pp. 1879-1888. by William Fletcher, Ziheng Yang posted to evolution sequence by zwang on 2009-07-22 11:49:33 as along with 6 people and 2 groups friendpine ppgardne djkt druvus nuin gjuggler Journal picks iSEEM
	ProteinArchitect: Protein Evolution above the Sequence Level [My Copy] PLoS ONE, Vol. 4, No. 7. (15 July 2009), e6176. by Matthias Haimel, Karin Pröll, Michael Rebhan posted to evolution protein sequence by zwang on 2009-07-22 08:54:45 as along with 3 people gjuggler sjcockell trfield
	Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic [My Copy] Nature, Vol. 459, No. 7250. (25 June 2009), pp. 1122-1125. by Gavin J. D. Smith, Dhanasekaran Vijaykrishna, Justin Bahl, et al.Samantha J. Lycett, Michael Worobey, Oliver G. Pybus, Siu K. Ma, Chung L. Cheung, Jayna Raghwani, Samir Bhatt, J. S. Malik Peiris, Yi Guan, Andrew Rambaut posted to evolution influenza by zwang on 2009-06-30 09:30:09 as along with 4 people marcio phoenixzxl kiekyon friendpine
	Mutations in influenza virus replication and transcription: detection of amino acid substitutions in hemagglutinin of an avian influenza virus (H1N1) [My Copy] FASEB J. (24 June 2009), fj.09-134072. by Ning Liu, Genyan Wang, Kim C. Lee, Yi Guan, Honglin Chen, Zongwei Cai posted to evolution influenza substitution by zwang on 2009-06-29 08:32:14 as
	To Investigate Protein Evolution by Detecting Suppressed Epitope Structures [My Copy] Journal of Molecular Evolution by Stephen Chong, J. P. Jin posted to epitope evolution protein by zwang on 2009-06-04 05:12:39 as
	Evolutionary Repercussions of Avian Culling on Host Resistance and Influenza Virulence [My Copy] PLoS ONE, Vol. 4, No. 5. (11 May 2009), e5503. by Eunha Shim, Alison P. Galvani posted to evolution influenza by zwang on 2009-05-19 15:55:34 as along with 1 person trfield
	Evolution of Complex RNA Polymerases: The Complete Archaeal RNA Polymerase Structure [My Copy] PLoS Biology, Vol. 7, No. 5. (1 May 2009), e102. by Yakov Korkhin, Ulug M. Unligil, Otis Littlefield, et al.Pamlea J. Nelson, David I. Stuart, Paul B. Sigler, Stephen D. Bell, Nicola G. Abrescia posted to complex evolution polymerase rna structure by zwang on 2009-05-06 05:21:55 as along with 2 people inesdesantiago yves_cite
	Nothing about protein structure classification makes sense except in the light of evolution [My Copy] Current Opinion in Structural Biology, Vol. 19, No. 3. (24 June 2009), pp. 329-334. by Ruben E. Valas, Song Yang, Philip E. Bourne posted to evolution protein structure by zwang on 2009-04-28 05:11:52 as along with 12 people and 3 groups mkotlyar skywalkerus02 dgront nyyu robfsouza apaydin barry coela Zephyrus sobolevnrm friendpine paulschlesinger structural_bioinformatics R.E.A.D baker-group
	Evolution of protein modularity. [My Copy] Current opinion in structural biology (20 April 2009) by Edward N N. Trifonov, Zakharia M M. Frenkel posted to evolution protein by zwang on 2009-04-28 05:11:35 as along with 1 person and 1 group stajich Mycology
	Protein Dynamism and Evolvability [My Copy] Science, Vol. 324, No. 5924. (10 April 2009), pp. 203-207. by Nobuhiko Tokuriki, Dan S. Tawfik posted to evolution protein by zwang on 2009-04-13 06:16:17 as along with 19 people and 3 groups tomhebbron anuragsethi ahmetbakan kevinchannon klexa lauresultan dbikard ibuch ramiro2k barry pablocarb ramanuja sobolevnrm biomcgary hsekiguc VGreiff phoenixzxl jdoconnell paulschlesinger structural_bioinformatics McCammon baker-group
	An Analytically Solvable Model for Rapid Evolution of Modular Structure [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (10 April 2009), e1000355. by Nadav Kashtan, Avi E. Mayo, Tomer Kalisky, Uri Alon posted to evolution structure by zwang on 2009-04-10 07:42:15 as along with 5 people jjray niallhaslam djkt ocs friendpine
	Sequencing and Analyses of All Known Human Rhinovirus Genomes Reveals Structure and Evolution [My Copy] Science (12 February 2009), 1165557. by Ann C. Palmenberg, David Spiro, Ryan Kuzmickas, et al.Shiliang Wang, Appolinaire Djikeng, Jennifer A. Rathe, Claire M. Fraser-Liggett, Stephen B. Liggett posted to evolution genome structure by zwang on 2009-04-08 16:56:16 as along with 11 people and 1 group memerman coela renatomilani farhat sen_cheng VGreiff wsjames neils ianholmes kshundyak jbhiatt Oxford Virology
	Predicting protein evolution in vitro by phage escape technology. [My Copy] Molecular bioSystems, Vol. 5, No. 2. (February 2009), pp. 128-133. by A. S. Rohrbach, T. J. Dickerson posted to evolution prediction protein virus by zwang on 2009-03-31 09:21:44 as
	Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses [My Copy] J. Virol. (18 March 2009), JVI.02565-08. by Eleca J. Dunham, Vivien G. Dugan, Emilee K. Kaser, et al.Sarah E. Perkins, Ian H. Brown, Edward C. Holmes, Jeffery K. Taubenberger posted to avian evolution influenza virus by zwang on 2009-03-27 09:18:13 as
	Influenza seasonality: Lifting the fog [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 10. (10 March 2009), pp. 3645-3646. by Marc Lipsitch, Cécile Viboud posted to evolution influenza virus by zwang on 2009-03-13 03:12:43 as along with 2 people friendpine kjgll
	The population genetics of dN/dS [My Copy] posted to evolution genetics by zwang on 2009-03-12 06:58:56 as
	Why proteins evolve at different rates: The functional hypothesis versus the mistranslation-induced protein misfolding hypothesis [My Copy] FEBS Letters, Vol. 583, No. 7. (02 April 2009), pp. 1053-1059. by Donghyun Park, Sun S. Choi posted to evolution protein by zwang on 2009-03-06 06:52:03 as along with 4 people scampos gjuggler carlosjavierna idoerg
	An evolutionary and structural characterization of mammalian protein complex organization. [My Copy] BMC genomics, Vol. 9, No. 1. (23 December 2008) by Philip Wong, Sonja Althammer, Andrea Hildebrand, et al.Andreas Kirschner, Philipp Pagel, Bernd Geissler, Pawel Smialowski, Florian Blöchl, Matthias Oesterheld, Thorsten Schmidt, Normann Strack, Fabian J. Theis, Andreas Ruepp, Dmitrij Frishman posted to complex evolution protein structure by zwang on 2009-03-05 02:08:30 as along with 3 people chica phoenixzxl chad_davis
	Predicting RNA-binding sites of proteins using support vector machines and evolutionary information [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 12. (2008), S6. by Cheng W. Cheng, Emily Su, Jenn K. Hwang, Ting Y. Sung, Wen L. Hsu posted to binding evolution prediction protein site svm by zwang on 2009-03-05 02:03:52 as along with 3 people balewis iaolier phoenixzxl
	Are Protein Domains Modules of Lateral Genetic Transfer? [My Copy] PLoS ONE, Vol. 4, No. 2. (20 February 2009), e4524. by Cheong X. Chan, Aaron E. Darling, Robert G. Beiko, Mark A. Ragan posted to domain evolution protein by zwang on 2009-02-26 13:52:10 as along with 3 people chancx druvus AaronDarling
	The evolutionary mechanics of domain organization in proteomes and the rise of modularity in the protein world. [My Copy] Structure (London, England : 1993), Vol. 17, No. 1. (14 January 2009), pp. 66-78. by M. Wang, G. Caetano-Anollés posted to domain evolution protein by zwang on 2009-02-23 02:48:38 as along with 1 person phoenixzxl
	The role of RNA folding free energy in the evolution of the polymerase genes of the influenza A virus [My Copy] Genome Biology, Vol. 10 (12 February 2009), R18. by Rachel, Panayiotis V. Benos posted to evolution gene influenza polymerase rna virus by zwang on 2009-02-18 03:10:51 as along with 3 people friendpine samgj mhamada
	Evolution of drug resistance in multiple distinct lineages of H5N1 avian influenza [My Copy] Infection, Genetics and Evolution, Vol. 9, No. 2. (March 2009), pp. 169-178. by Andrew W. Hill, Robert P. Guralnick, Meredith J. Wilson, Farhat Habib, Daniel Janies posted to evolution influenza by zwang on 2009-02-16 03:13:00 as along with 1 person farhat
	Influenza vaccine strain selection and recent studies on the global migration of seasonal influenza viruses [My Copy] Vaccine, Vol. 26 (12 September 2008), pp. D31-D34. by C. Russell, T. Jones, I. Barr, et al.N. Cox, R. Garten, V. Gregory, I. Gust, A. Hampson, A. Hay, A. Hurt posted to evolution influenza virus by zwang on 2009-02-10 05:39:23 as
	Molecular evolution of human influenza A viruses in a local area during eight influenza epidemics from 2000 to 2007 [My Copy] Archives of Virology by Hassan Zaraket, Reiko Saito, Isamu Sato, et al.Yasushi Suzuki, Danjuan Li, Clyde Dapat, Isolde Caperig-Dapat, Taeko Oguma, Asami Sasaki, Hiroshi Suzuki posted to evolution influenza virus by zwang on 2009-02-06 09:49:28 as along with 1 person operon
	Molecular Evolution of HA1 in Influenza A (H3N2) Viruses Isolated in Japan from 1989 to 2006. [My Copy] Intervirology, Vol. 51, No. 6. (22 January 2009), pp. 377-384. by Mika Saitoh, Hirokazu Kimura, Kunihisa Kozawa, Akira Shoji posted to evolution hemagglutinin influenza virus by zwang on 2009-02-06 08:21:12 as
	Is Genetic Evolution Predictable? [My Copy] Science, Vol. 323, No. 5915. (6 February 2009), pp. 746-751. by David L. Stern, Virginie Orgogozo posted to evolution phylogeny prediction by zwang on 2009-02-06 06:16:43 as along with 12 people and 1 group emptyhb Scis0000002 anphony provero kshundyak balabu pkonings Zephyrus jjray kaniko RamuAnandakrishnan phoenixzxl R.E.A.D
	Evolutionary Modeling of Rate Shifts Reveals Specificity Determinants in HIV-1 Subtypes [My Copy] posted to evolution hiv virus by zwang on 2009-02-05 02:17:11 as
	Estimation of Transmission Parameters of H5N1 Avian Influenza Virus in Chickens [My Copy] PLoS Pathog, Vol. 5, No. 1. (30 January 2009), e1000281. by Annemarie Bouma, Ivo Claassen, Ketut Natih, et al.Don Klinkenberg, Christl A. Donnelly, Guus Koch, Michiel van Boven posted to avian evolution influenza by zwang on 2009-02-02 13:23:04 as along with 2 people mddc mrphospho
	The Population Genetics of dN/dS [My Copy] PLoS Genet, Vol. 4, No. 12. (12 December 2008), e1000304. by Sergey Kryazhimskiy, Joshua B. Plotkin posted to evolution genetics phylogeny by zwang on 2009-01-06 05:19:01 as along with 18 people and 2 groups memerman operon gjuggler seb1 dposada gwallau ilyashl skembel proulx nuin bpcusack Zephyrus balicea renewang stajich michaelbarton druvus djkt R.E.A.D Mycology
	Homologous Recombination as an Evolutionary Force in the Avian Influenza A Virus [My Copy] Mol Biol Evol, Vol. 26, No. 1. (1 January 2009), pp. 177-187. by Cheng-Qiang He, Zhi-Xun Xie, Guan-Zhu Han, et al.Jian-Bao Dong, Dong Wang, Jia-Bo Liu, Le-Yuan Ma, Xiao-Fei Tang, Xi-Ping Liu, Yao-Shan Pang, Guo-Rong Li posted to evolution influenza virus by zwang on 2009-01-06 05:18:08 as
	Effects of Retroviruses on Host Genome Function [My Copy] Annual Review of Genetics, Vol. 42, No. 1. (2008), pp. 709-732. by Patric Jern, John M. Coffin posted to evolution genome rna virus by zwang on 2008-11-06 02:02:46 as along with 2 people gwallau vpaces
	Phylogenetic Approaches to the Study of Extinction [My Copy] Annual Review of Ecology, Evolution, and Systematics, Vol. 39, No. 1. (2008), pp. 301-319. by Andy Purvis posted to evolution phylogeny by zwang on 2008-11-04 04:11:40 as along with 3 people and 2 groups anphony jlgreen lizbiogen iSEEM Green Lab
	Genome-wide nucleotide-level mammalian ancestor reconstruction [My Copy] Genome Research, Vol. 18, 1829. posted to dna evolution genome phylogeny by zwang on 2008-11-03 10:50:45 as

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protein	358
influenza	248
structure	196
evolution	189
interaction	182
virus	155
network	132
prediction	108
rna	89
genome	77
domain	60
yeast	60
sequence	59
gene	54
complex	47
phylogeny	43
transcription	34
rnasep	33
co-evolution	32
avian	30
binding	30
dynamics	29
polymerase	29
mutation	28
folding	27
genome-wide	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	21
alignment	20
clustering	19
modeling	19
regulatory	19
site	19
human	18
antibody	17
eukaryota	17
regulation	16
function	15
genetic	15
design	14
fluorescent	14
residue	13
synthetic	13
bayesian	12
drug	12
metabolism	12
epitope	11
immunity	11
interface	10
microarray	10
pathway	10
promoter	10
algorithm	9
massspectrometry	9
diversity	8
ecoli	8
hiv	8
peptide	8
phenotype	8
bioinformatics	7
computational	7
invivo	7
replication	7
review	7
vaccine	7
y2h	7
chromatin	6
hostspecialization	6
specy	6
system	6
systematic	6
annotation	5
disease	5
fret	5
geneexpression	5
homology	5
insilico	5
mammal	5
nmr	5
phosphorylation	5
prokaryote	5
selection	5
substitution	5
subunit	5
swine	5
visualization	5
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architecture	4
assembly	4
divergence	4
em	4
experiment	4
genetics	4
hierarchical	4
histone	4
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membrane	4
microrna	4
module	4
ncrna	4
nuclear	4
ortholog	4
proteomics	4
purification	4
rule	4
surface	4
svm	4
archaea	3
biofuel	3
cancer	3
cellcycle	3
coil	3
contact	3
deletion	3
element	3
genefamily	3
immune	3
m2	3
methylation	3
np	3
profile	3
protocol	3
reassortment	3
research	3
science	3
secondary	3
simulation	3
translation	3
ysd	3
accuracy	2
bifc	2
bootstrap	2
bret	2
chaperone	2
chromosome	2
cloning	2
comparativegenomics	2
cooccurrence	2
database	2
docking	2
endogenous	2
epistasis	2
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homologymodeling	2
hub	2
information-theory	2
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likelihood	2
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mi	2
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viability	2
web	2
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collaboration	1
compensatory	1
confidence	1
counter	1
cpg-island	1
culture	1
degradation	1
detection	1
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emulation	1
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nature	1
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oligonucleotide	1
oral	1
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pca	1
plant	1
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qtl	1
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similarity	1
singlecell	1
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strain	1
substrate_recognition	1
tag	1
tap	1
terminator	1
text-mining	1
theory	1
threading	1
tissue	1
tlr	1
transmembrane	1
trna	1
vesicle	1
video	1

zwang's evolution [189 articles] Export

zwang's tags