zwang's folding [27 articles] Export

Recent papers added to zwang's library classified by the tag folding. You can also see everyone's folding.

	Simultaneous prediction of protein folding and docking at high resolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 45. (10 November 2009), pp. 18978-18983. by Rhiju Das, Ingemar AndrÃ©, Yang Shen, et al.Yibing Wu, Alexander Lemak, Sonal Bansal, Cheryl H. Arrowsmith, Thomas Szyperski, David Baker posted to protein prediction folding by zwang on 2009-11-11 10:39:19 as along with 4 people ahmetbakan paulschlesinger apaydin ibuch
	Direct observation of ultrafast folding and denatured state dynamics in single protein molecules [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 44. (3 November 2009), pp. 18569-18574. by Hannes Neuweiler, Christopher M. Johnson, Alan R. Fersht posted to protein folding by zwang on 2009-11-04 09:16:23 as along with 2 people and 1 group quanwang samjlord moernerlab
	Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 289-293. by Erez Lieberman-Aiden, Nynke L. van Berkum, Louise Williams, et al.Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R. Lajoie, Peter J. Sabo, Michael O. Dorschner, Richard Sandstrom, Bradley Bernstein, M. A. Bender, Mark Groudine, Andreas Gnirke, John Stamatoyannopoulos, Leonid A. Mirny, Eric S. Lander, Job Dekker posted to interaction genome folding by zwang on 2009-10-14 09:35:49 as along with 32 people and 3 groups vingron pmcarlton alhufton psique qayub chvlyl TorstenWaldminghaus kintoki Garamonfok inesdesantiago NickFurnham DrRichardBadge roys rdiaz daveGerrard colinveal frohike nrk891 timflutre afenley kshameer polivares mgatmedsci diamantis flbarroso jdoconnell fenghezi daforerog bpcusack gjuggler gdb gbloeb JLab BergmanLab Journal picks
	Coupling between Properties of the Protein Shape and the Rate of Protein Folding [My Copy] PLoS ONE, Vol. 4, No. 8. (3 August 2009), e6476. by Dmitry N. Ivankov, Natalya S. Bogatyreva, Michail Y. Lobanov, Oxana V. Galzitskaya posted to protein folding by zwang on 2009-08-27 11:36:53 as
	Chemical, physical, and theoretical kinetics of an ultrafast folding protein [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 48. (2 December 2008), pp. 18655-18662. by Jan Kubelka, Eric R. Henry, Troy Cellmer, James Hofrichter, William A. Eaton posted to folding protein by zwang on 2009-02-05 03:20:18 as along with 3 people Diego_Prada operon RamuAnandakrishnan
	Exploring knotting mechanisms in protein folding [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 48. (2 December 2008), pp. 18740-18745. by Anna L. Mallam, Elizabeth R. Morris, Sophie E. Jackson posted to folding protein by zwang on 2009-02-05 03:19:43 as along with 1 person cactus
	NMR structures of two designed proteins with high sequence identity but different fold and function [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (23 September 2008), pp. 14412-14417. by Yanan He, Yihong Chen, Patrick Alexander, Philip N. Bryan, John Orban posted to folding function nmr protein structure by zwang on 2008-10-09 08:58:11 as along with 8 people bqcao diod qluo martainn wilbur markchen reyez kentsis
	Understanding the role of the topology in protein folding by computational inverse folding experiments. [My Copy] Computational biology and chemistry, Vol. 32, No. 4. (August 2008), pp. 233-239. by A. Mucherino, S. Costantini, D. di Serafino, M. D'Apuzzo, A. Facchiano, G. Colonna posted to computational folding protein by zwang on 2008-08-30 03:53:26 as along with 1 person flbarroso
	The dual-basin landscape in GFP folding [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 34. (2008), pp. 12283-12288. by Benjamin T. Andrews, Shachi Gosavi, John M. Finke, José N. Onuchic, Patricia A. Jennings posted to fluorescent folding protein structure by zwang on 2008-08-27 09:02:08 as
	Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution [My Copy] Cell, Vol. 134, No. 2. (25 July 2008), pp. 341-352. by Allan D. Drummond, Claus O. Wilke posted to evolution folding protein by zwang on 2008-08-05 03:51:11 as along with 6 people robfsouza nilsbecker scherrer jjray cambray bpcusack
	Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements [My Copy] BMC Bioinformatics, Vol. 9 (23 July 2008), 320. by Qingwu Yang, Sing-Hoi Sze posted to folding interaction prediction protein structure by zwang on 2008-07-26 10:43:26 as
	Tertiary Interactions Determine the Accuracy of RNA Folding [My Copy] posted to folding prediction rna by zwang on 2008-07-13 08:36:12 as
	Structural basis for the cooperation of Hsp70 and Hsp110 chaperones in protein folding. [My Copy] Cell, Vol. 133, No. 6. (13 June 2008), pp. 1068-1079. by S. Polier, Z. Dragovic, F. U. Hartl, A. Bracher posted to folding structure by zwang on 2008-07-07 04:17:04 as along with 1 person bratwurst
	Kinetic barriers and the role of topology in Protein and RNA folding. [My Copy] Protein Sci (23 May 2008), ps.036319.108. by Tobin R. Sosnick posted to folding interaction protein rna by zwang on 2008-07-01 08:50:56 as along with 2 people svozil ARobson
	Implications from a Network-Based Topological Analysis of Ubiquitin Unfolding Simulations [My Copy] PLoS ONE, Vol. 3, No. 5. (14 May 2008), e2149. by Arun Krishnan, Alessandro Giuliani, Joseph P. Zbilut, Masaru Tomita posted to folding network protein simulation structure by zwang on 2008-06-16 01:54:32 as along with 1 person phoenixzxl
	Multiple Routes and Structural Heterogeneity in Protein Folding [My Copy] Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 489-510. by Jayant B. Udgaonkar posted to folding protein structure by zwang on 2008-05-08 09:59:05 as along with 1 person flbarroso
	The Protein Folding Problem [My Copy] Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 289-316. by Ken A. Dill, S. Banu Ozkan, M. Scott Shell, Thomas R. Weikl posted to folding protein by zwang on 2008-05-08 09:53:48 as along with 7 people Diego_Prada dfdong siggi84 qluo doktornoe flbarroso dsekaran
	RNA Folding: Conformational Statistics, Folding Kinetics, and Ion Electrostatics [My Copy] Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 197-214. by Shi J. Chen posted to folding rna by zwang on 2008-05-08 09:53:36 as
	Structural inference of native and partially folded RNA by high-throughput contact mapping [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 11. (18 March 2008), pp. 4144-4149. by Rhiju Das, Madhuri Kudaravalli, Magdalena Jonikas, et al.Alain Laederach, Robert Fong, Jason P. Schwans, David Baker, Joseph A. Piccirilli, Russ B. Altman, Daniel Herschlag posted to contact folding rna structure by zwang on 2008-03-20 13:00:39 as along with 1 person and 1 group wsjames Oxford Virology
	Inhibition of Escherichia coli RNase P by oligonucleotide directed misfolding of RNA [My Copy] RNA, Vol. 9, No. 12. (1 December 2003), pp. 1437-1445. by Jessica L. Childs, Alex W. Poole, Douglas H. Turner posted to bacterial folding rna rnasep by zwang on 2008-03-11 05:35:11 as
	GroEL stimulates protein folding through forced unfolding [My Copy] Nature Structural & Molecular Biology, Vol. 15, No. 3. (02 March 2008), pp. 303-311. by Zong Lin, Damian Madan, Hays S. Rye posted to chaperone folding protein by zwang on 2008-03-06 14:00:12 as along with 3 people aalibes cactus hsekiguc
	Unfolding the fold of cyclic cysteine-rich peptides [My Copy] Protein Sci, Vol. 17, No. 3. (1 March 2008), pp. 482-493. by Amarda Shehu, Lydia E. Kavraki, Cecilia Clementi posted to folding peptide by zwang on 2008-02-22 12:49:50 as
	Simulating replica exchange simulations of protein folding with a kinetic network model [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 39. (25 September 2007), pp. 15340-15345. by Weihua Zheng, Michael Andrec, Emilio Gallicchio, Ronald M. Levy posted to folding modeling network protein by zwang on 2007-11-01 02:13:25 as along with 1 person Diego_Prada
	A First-Principles Model of Early Evolution: Emergence of Gene Families, Species, and Preferred Protein Folds [My Copy] PLoS Computational Biology, Vol. 3, No. 7. (1 July 2007), e139. by Konstantin B. Zeldovich, Peiqiu Chen, Boris E. Shakhnovich, Eugene I. Shakhnovich posted to evolution folding gene modeling protein specy by zwang on 2007-08-28 07:39:34 as along with 6 people BioNica grahamc cjeans Jporci farhat biinins
	Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy [My Copy] PNAS, Vol. 104, No. 27. (3 July 2007), pp. 11257-11262. by Paul Schanda, Vincent Forge, Bernhard Brutscher posted to folding nmr protein structure by zwang on 2007-08-15 04:12:29 as along with 2 people laurenm rph
	Structural Insights into the Evolution of a Non-Biological Protein: Importance of Surface Residues in Protein Fold Optimization [My Copy] posted to evolution folding protein residue surface by zwang on 2007-05-23 11:57:34 as
	The Highly Cooperative Folding of Small Naturally Occurring Proteins Is Likely the Result of Natural Selection [My Copy] posted to folding protein by zwang on 2007-04-12 10:25:20 as

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protein	359
influenza	251
structure	197
evolution	191
interaction	182
virus	156
network	133
prediction	109
rna	90
genome	77
domain	60
yeast	60
sequence	59
gene	54
complex	47
phylogeny	43
rnasep	34
transcription	34
co-evolution	32
avian	30
binding	30
dynamics	29
polymerase	29
mutation	28
folding	27
genome-wide	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	22
alignment	20
clustering	19
modeling	19
regulatory	19
site	19
human	18
antibody	17
eukaryota	17
regulation	16
function	15
genetic	15
design	14
fluorescent	14
drug	13
residue	13
synthetic	13
bayesian	12
metabolism	12
epitope	11
immunity	11
interface	10
microarray	10
pathway	10
promoter	10
algorithm	9
massspectrometry	9
diversity	8
ecoli	8
hiv	8
peptide	8
phenotype	8
replication	8
bioinformatics	7
computational	7
invivo	7
review	7
vaccine	7
y2h	7
chromatin	6
hostspecialization	6
specy	6
system	6
systematic	6
annotation	5
disease	5
fret	5
geneexpression	5
homology	5
insilico	5
mammal	5
nmr	5
phosphorylation	5
prokaryote	5
selection	5
substitution	5
subunit	5
swine	5
visualization	5
antigen	4
architecture	4
assembly	4
divergence	4
em	4
experiment	4
genetics	4
hierarchical	4
histone	4
localization	4
membrane	4
microrna	4
module	4
ncrna	4
nuclear	4
ortholog	4
proteomics	4
purification	4
rule	4
surface	4
svm	4
archaea	3
biofuel	3
cancer	3
cellcycle	3
coil	3
contact	3
deletion	3
element	3
genefamily	3
immune	3
m2	3
methylation	3
np	3
profile	3
protocol	3
reassortment	3
research	3
science	3
secondary	3
simulation	3
translation	3
ysd	3
accuracy	2
bifc	2
bootstrap	2
bret	2
chaperone	2
chromosome	2
cloning	2
comparativegenomics	2
cooccurrence	2
database	2
docking	2
endogenous	2
epistasis	2
fitness	2
homologymodeling	2
hub	2
information-theory	2
inhibition	2
likelihood	2
linker	2
mathematic	2
mhc	2
mi	2
molecularrecognition	2
mp	2
neural	2
ns	2
phylogeography	2
positiveselection	2
presentation	2
primer	2
ribozyme	2
singlemolecule	2
stability	2
target	2
technique	2
viability	2
web	2
bsi	1
clade	1
coevolution	1
co-extinction	1
collaboration	1
compensatory	1
confidence	1
counter	1
cpg-island	1
culture	1
degradation	1
detection	1
differentiation	1
duplication	1
ecology	1
emulation	1
enzyme	1
epigenetics	1
fuck	1
geneontology	1
generegulation	1
hgt	1
hla	1
hmm	1
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inhibitor	1
integration	1
invitro	1
lgt	1
magnetic	1
marker	1
model	1
morphological	1
mrp	1
nanopore	1
nanoscale	1
nature	1
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noise	1
oligonucleotide	1
oral	1
pathobiology	1
pca	1
plant	1
positiveepistasis	1
protection	1
qtl	1
reliability	1
reverse-engineering	1
ribosome	1
sampling	1
sequencing	1
similarity	1
singlecell	1
sites	1
social	1
speciation	1
statistical	1
strain	1
substrate_recognition	1
tag	1
tap	1
terminator	1
text-mining	1
theory	1
threading	1
tissue	1
tlr	1
transmembrane	1
trna	1
vesicle	1
video	1

zwang's folding [27 articles] Export

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