zwang's protein [at least 200 articles] Export

Recent papers added to zwang's library classified by the tag protein. You can also see everyone's protein.

	Finding of residues crucial for supersecondary structure formation [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 45. (10 November 2009), pp. 18996-19000. by Alexander E. Kister, Israel Gelfand posted to structure protein by zwang on 2009-11-11 10:39:31 as along with 1 person dfdong
	Simultaneous prediction of protein folding and docking at high resolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 45. (10 November 2009), pp. 18978-18983. by Rhiju Das, Ingemar AndrÃ©, Yang Shen, et al.Yibing Wu, Alexander Lemak, Sonal Bansal, Cheryl H. Arrowsmith, Thomas Szyperski, David Baker posted to protein prediction folding by zwang on 2009-11-11 10:39:19 as along with 4 people ahmetbakan paulschlesinger apaydin ibuch
	Molecular Basis of the Interaction for an Essential Subunit PA-PB1 in Influenza Virus RNA Polymerase: Insights from Molecular Dynamics Simulation and Free Energy Calculation. [My Copy] Molecular pharmaceutics (2 November 2009) by Huanxiang Liu, Xiaojun Yao posted to protein polymerase interaction influenza by zwang on 2009-11-10 08:04:19 as
	Nuclear functions of the influenza A and B viruses NS1 proteins: do they play a role in viral mRNA export? [My Copy] Vaccine, Vol. 27, No. 45. (23 October 2009), pp. 6312-6316. by Jana Schneider, Thorsten Wolff posted to protein ns influenza by zwang on 2009-11-10 07:48:04 as
	The Polymerase Acidic Protein Gene of Influenza A Virus Contributes to Pathogenicity in a Mouse Model [My Copy] J. Virol., Vol. 83, No. 23. (1 December 2009), pp. 12325-12335. by Min-Suk Song, Philippe N. Pascua, Jun H. Lee, et al.Yun H. Baek, Ok-Jun Lee, Chul-Joong Kim, Hyunggee Kim, Richard J. Webby, Robert G. Webster, Young K. Choi posted to virus protein polymerase influenza by zwang on 2009-11-08 08:55:04 as
	Direct observation of ultrafast folding and denatured state dynamics in single protein molecules [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 44. (3 November 2009), pp. 18569-18574. by Hannes Neuweiler, Christopher M. Johnson, Alan R. Fersht posted to protein folding by zwang on 2009-11-04 09:16:23 as along with 2 people and 1 group quanwang samjlord moernerlab
	Computational design of ligand binding is not a solved problem [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 44. (3 November 2009), pp. 18491-18496. by Bettina Schreier, Christian Stumpp, Silke Wiesner, Birte HÃ¶cker posted to protein design by zwang on 2009-11-04 09:16:00 as along with 3 people reyez pmung carlosjavierna
	Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (30 October 2009), 365. by Stefano Lise, Cedric Archambeau, Massimiliano Pontil, David Jones posted to residue protein prediction interface by zwang on 2009-11-04 09:10:52 as along with 6 people and 1 group sillitoe apaydin kshameer phoenixzxl higueruelo neils Orengo Group Journal Picks
	Structure of Protein Interaction Networks and Their Implications on Drug Design [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (30 October 2009), e1000550. by Takeshi Hase, Hiroshi Tanaka, Yasuhiro Suzuki, So Nakagawa, Hiroaki Kitano posted to protein network interaction drug by zwang on 2009-11-03 08:24:49 as along with 9 people and 1 group kiekyon nickolay kshameer phoenixzxl venancio CorinYeats ess30 poirel jbesnard Orengo Group Journal Picks
	Clustering of protein domains for functional and evolutionary studies. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 335. by Pavle Goldstein, Jurica Zucko, Dusica Vujaklija, et al.Anita Krisko, Daslav Hranueli, Paul F. Long, Catherine Etchebest, Bojan Basrak, John Cullum posted to protein evolution domain clustering by zwang on 2009-10-19 09:07:40 as along with 5 people and 2 groups sillitoe kshameer druvus ppgardne phoenixzxl Orengo Group Journal Picks Journal picks
	The effects of influenza A virus PB1-F2 protein on polymerase activity are strain specific and do not impact pathogenesis. [My Copy] J. Virol. (14 October 2009), JVI.01785-09. by Julie L. McAuley, Kelly Zhang, Jonathan A. McCullers posted to protein polymerase influenza by zwang on 2009-10-19 08:15:53 as
	Phylogenetic analysis of modularity in protein interaction networks. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (14 October 2009), 333. by Sinan Erten, Xin Li, Gurkan Bebek, Jing Li, Mehmet Koyutürk posted to protein phylogeny network interaction by zwang on 2009-10-16 03:25:50 as along with 7 people and 2 groups sillitoe biomcgary ppgardne grahamc druvus barriot phoenixzxl Orengo Group Journal Picks Journal picks
	Structural relationships among proteins with different global topologies and their implications for function annotation strategies [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 41. (13 October 2009), pp. 17377-17382. by Donald Petrey, Markus Fischer, Barry Honig posted to structure protein by zwang on 2009-10-14 06:30:14 as along with 5 people and 1 group apaydin philcarter carlosjavierna TRHvidsten phoenixzxl Orengo Group Journal Picks
	Prediction of antigenic epitopes on protein surfaces by consensus scoring [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 302. by Shide Liang, Dandan Zheng, Chi Zhang, Martin Zacharias posted to protein prediction epitope by zwang on 2009-09-24 08:06:34 as along with 2 people phoenixzxl niallhaslam
	Understanding hydrogen-bond patterns in proteins using network motifs [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2921-2928. by Ofer Rahat, Uri Alon, Yaakov Levy, Gideon Schreiber posted to structure protein motif by zwang on 2009-09-24 08:05:59 as along with 4 people tomhebbron VGreiff scmelton phoenixzxl
	The continuity of protein structure space is an intrinsic property of proteins [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 37. (15 September 2009), pp. 15690-15695. by Jeffrey Skolnick, Adrian K. Arakaki, Seung Y. Lee, Michal Brylinski posted to structure protein by zwang on 2009-09-17 13:19:48 as along with 3 people docv TRHvidsten philomorph
	Structural domain-domain interactions: Assessment and comparison with protein-protein interaction data to improve the interactome. [My Copy] Proteins, Vol. 9999, No. 9999. (5 August 2009), NA. by C. Prieto, J. De Las Rivas posted to structure protein interaction domain by zwang on 2009-09-07 07:16:44 as along with 2 people higueruelo phoenixzxl
	Pushing Structural Information into the Yeast Interactome by High-Throughput Protein Docking Experiments [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000490. by Roberto Mosca, Carles Pons, Juan Fernández-Recio, Patrick Aloy posted to yeast structure protein by zwang on 2009-09-05 13:49:46 as along with 4 people and 1 group klexa bdessailly phoenixzxl TRHvidsten Orengo Group Journal Picks
	A combinatorial approach to detect coevolved amino acid networks in protein families of variable divergence. [My Copy] PLoS computational biology, Vol. 5, No. 9. (4 September 2009), e1000488. by Julie Baussand, Alessandra Carbone posted to protein network coevolution by zwang on 2009-09-05 13:49:28 as along with 6 people and 1 group dfdong anuragsethi sobolevnrm phoenixzxl maren barry Bioinformatics
	Universal features in the genome-level evolution of protein domains. [My Copy] Genome biology, Vol. 10, No. 1. (30 January 2009), R12. by Marco Cosentino Lagomarsino, Alessandro L. Sellerio, Philip D. Heijning, Bruno Bassetti posted to protein genome evolution domain by zwang on 2009-09-04 08:53:22 as along with 7 people docv phoenixzxl djkt idoerg VGreiff grahamc pawelszczesny
	Restriction versus guidance in protein structure prediction [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 36. (8 September 2009), pp. 15302-15307. by Joseph A. Hegler, Joachim LÃ¤tzer, Amarda Shehu, Cecilia Clementi, Peter G. Wolynes posted to structure protein prediction by zwang on 2009-08-31 15:12:45 as along with 2 people mkotlyar carlosjavierna
	Detection of Functional Modes in Protein Dynamics [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000480. by Jochen S. Hub, Bert L. de Groot posted to protein by zwang on 2009-08-31 15:02:59 as along with 3 people sobolevnrm klexa Diego_Prada
	Computation of Conformational Coupling in Allosteric Proteins [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000484. by Brian A. Kidd, David Baker, Wendy E. Thomas posted to protein by zwang on 2009-08-31 15:02:41 as along with 6 people and 1 group sobolevnrm klexa oteri boris_aguilar bmduggan barry McCammon
	Four Distances between Pairs of Amino Acids Provide a Precise Description of their Interaction [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (14 August 2009), e1000470. by Mati Cohen, Vladimir Potapov, Gideon Schreiber posted to protein interaction by zwang on 2009-08-31 15:02:26 as along with 6 people nickolay klexa Diego_Prada reyez TRHvidsten ericrpaquet
	Analysis of the Free-Energy Surface of Proteins from Reversible Folding Simulations [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (10 July 2009), e1000428. by Lucy R. Allen, Sergei V. Krivov, Emanuele Paci posted to structure protein prediction by zwang on 2009-08-27 11:40:53 as along with 2 people melo_mcr Diego_Prada
	Coupling between Properties of the Protein Shape and the Rate of Protein Folding [My Copy] PLoS ONE, Vol. 4, No. 8. (3 August 2009), e6476. by Dmitry N. Ivankov, Natalya S. Bogatyreva, Michail Y. Lobanov, Oxana V. Galzitskaya posted to protein folding by zwang on 2009-08-27 11:36:53 as
	Sequence physical properties encode the global organization of protein structure space [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 34. (25 August 2009), pp. 14345-14348. by S. Rackovsky posted to structure sequence protein prediction by zwang on 2009-08-27 02:47:10 as along with 3 people phoenixzxl roys kevinchannon
	A Search for Energy Minimized Sequences of Proteins [My Copy] PLoS ONE, Vol. 4, No. 8. (19 August 2009), e6684. by Anupam N. Jha, G. K. Ananthasuresh, Saraswathi Vishveshwara posted to structure protein by zwang on 2009-08-25 10:08:38 as along with 1 person phoenixzxl
	A Self-Organizing Algorithm for Modeling Protein Loops [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (21 August 2009), e1000478. by Pu Liu, Fangqiang Zhu, Dmitrii N. Rassokhin, Dimitris K. Agrafiotis posted to protein computational by zwang on 2009-08-25 03:53:49 as along with 1 person and 1 group CorinYeats Orengo Group Journal Picks
	Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2559-2565. by Pin-Hao Chi, Bin Pang, Dmitry Korkin, Chi-Ren Shyu posted to structure protein alignment by zwang on 2009-08-17 11:45:58 as along with 2 people walshtp robfsouza
	Knowledge-guided inference of domain-domain interactions from incomplete protein-protein interaction networks [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2492-2499. by Mei Liu, Xue-wen Chen, Raja Jothi posted to protein network interaction domain by zwang on 2009-08-17 11:45:37 as along with 3 people grahamc robfsouza phoenixzxl
	Geometric De-noising of Protein-Protein Interaction Networks [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (7 August 2009), e1000454. by Oleksii Kuchaiev, Marija Rašajski, Desmond J. Higham, Nataša Pržulj posted to protein network interaction by zwang on 2009-08-13 04:20:34 as along with 8 people and 1 group CorinYeats klexa tmmurali roys grahamc robfsouza phoenixzxl kiekyon Orengo Group Journal Picks
	Protein-Peptide Interactions Adopt the Same Structural Motifs as Monomeric Protein Folds [My Copy] cell posted to structure protein motif interaction by zwang on 2009-08-12 13:30:49 as
	Complex discovery from weighted PPI networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 15. (1 August 2009), pp. 1891-1897. by Guimei Liu, Limsoon Wong, Hon Nian N. Chua posted to complex network protein by zwang on 2009-07-28 10:20:29 as along with 7 people kgutwin kiekyon friendpine poirel neils tmmurali grahamc
	A new method for revealing correlated mutations under the structural and functional constraints in proteins [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2506-2513. by Byung-Chul Lee, Dongsup Kim posted to co-evolution protein structure by zwang on 2009-07-24 12:12:54 as along with 5 people RebeccaHamer qluo jlike operon phoenixzxl
	ProteinArchitect: Protein Evolution above the Sequence Level [My Copy] PLoS ONE, Vol. 4, No. 7. (15 July 2009), e6176. by Matthias Haimel, Karin Pröll, Michael Rebhan posted to evolution protein sequence by zwang on 2009-07-22 08:54:45 as along with 3 people gjuggler sjcockell trfield
	Design of therapeutic proteins with enhanced stability. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 29. (21 July 2009), pp. 11937-11942. by Naresh Chennamsetty, Vladimir Voynov, Veysel Kayser, Bernhard Helk, Bernhardt L. Trout posted to protein structure by zwang on 2009-07-09 04:08:58 as along with 5 people guhjy biomcgary marti phoenixzxl edws
	RuvB-Like Protein 2 Is a Suppressor of Influenza A Virus Polymerases [My Copy] J. Virol., Vol. 83, No. 13. (1 July 2009), pp. 6429-6434. by Satoshi Kakugawa, Masayuki Shimojima, Gabriele Neumann, Hideo Goto, Yoshihiro Kawaoka posted to influenza polymerase protein virus by zwang on 2009-06-30 09:30:28 as along with 1 person friendpine
	Prediction of protein-protein interactions: a study of the co-evolution model. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 541 (2009), pp. 61-88. by Itai Sharon, Jason V. Davis, Golan Yona posted to co-evolution interaction prediction protein by zwang on 2009-06-30 09:20:42 as along with 3 people chica kgutwin phoenixzxl
	Global distribution of conformational states derived from redundant models in the PDB points to non-uniqueness of the protein structure [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 26. (30 June 2009), pp. 10505-10510. by Prasad V. Burra, Ying Zhang, Adam Godzik, Boguslaw Stec posted to protein structure by zwang on 2009-06-30 09:14:25 as along with 6 people and 1 group ubcg08l apaydin sobolevnrm philcarter aalibes TRHvidsten Orengo Group Journal Picks
	Protein interaction platforms: visualization of interacting proteins in yeast [My Copy] Nat Meth, Vol. 6, No. 7. (31 July 2009), pp. 500-502. by Alexa M. Schmitz, Monica F. Morrison, Akochi O. Agunwamba, Max L. Nibert, Cammie F. Lesser posted to interaction protein visualization yeast by zwang on 2009-06-30 09:12:19 as along with 4 people module Yanno guhjy flbarroso
	Exploring the Free Energy Landscape: From Dynamics to Networks and Back [My Copy] PLoS Comput Biol, Vol. 5, No. 6. (26 June 2009), e1000415. by Diego Prada-Gracia, Jesús Gómez-Gardeñes, Pablo Echenique, Fernando Falo posted to dynamics network protein structure by zwang on 2009-06-27 11:53:41 as along with 6 people Fernando_FF sobolevnrm kiekyon phoenixzxl edws Diego_Prada
	RosettaLigand Docking with Full Ligand and Receptor Flexibility. [My Copy] Journal of molecular biology (18 November 2008) by Ian W W. Davis, David Baker posted to protein structure by zwang on 2009-06-27 11:52:51 as along with 2 people and 1 group barry oteri McCammon
	Structural Alphabets for Protein Structure Classification: A Comparison Study [My Copy] Journal of Molecular Biology (25 December 2008) by Q. Le, G. Pollastri, P. Koehl posted to protein structure by zwang on 2009-06-27 11:52:30 as along with 4 people and 2 groups svozil idoerg barry reyez structural_bioinformatics Bioinformatics
	Phosphorylation of the influenza A virus protein PB1-F2 by PKC is crucial for apoptosis promoting functions in monocytes [My Copy] Cellular Microbiology, Vol. 9999, No. 999A. (2009) by David Mitzner, Sabine E. Dudek, Nicole Studtrucker, et al.Darisuren Anhlan, Igor Mazur, Josef Wissing, Lothar Jänsch, Ludmilla Wixler, Karsten Bruns, Alok Sharma, Victor Wray, Peter Henklein, Stephan Ludwig, Ulrich Schubert posted to influenza phosphorylation polymerase protein virus by zwang on 2009-06-17 02:29:39 as
	A quantitative strategy to detect changes in accessibility of protein regions to chemical modification on heterodimerization [My Copy] Protein Science, Vol. 18, No. 7. (2009), pp. 1448-1458. by Mathias Dreger, Bo W. Leung, George G. Brownlee, Tao Deng posted to protein by zwang on 2009-06-15 07:35:22 as along with 1 person dfdong
	Improved beta-protein structure prediction by multilevel optimization of nonlocal strand pairings and local backbone conformation [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2006), NA. by Philip Bradley, David Baker posted to prediction protein structure by zwang on 2009-06-11 13:52:03 as along with 2 people dgront wouterboomsma
	Influence of protein abundance on high-throughput protein-protein interaction detection. [My Copy] PloS one, Vol. 4, No. 6. (5 June 2009), e5815. by J. Ivanic, X. Yu, A. Wallqvist, J. Reifman posted to interaction protein by zwang on 2009-06-11 03:47:26 as along with 3 people nzm guhjy sjcockell
	A Complicated Message: Identification of a Novel PB1-Related Protein Translated from Influenza A Virus Segment 2 mRNA [My Copy] J. Virol., Vol. 83, No. 16. (15 August 2009), pp. 8021-8031. by Helen M. Wise, Agnes Foeglein, Jiechao Sun, et al.Rosa M. Dalton, Sheetal Patel, Wendy Howard, Emma C. Anderson, Wendy S. Barclay, Paul Digard posted to gene influenza protein by zwang on 2009-06-08 04:26:22 as along with 2 people dfdong friendpine
	Automated unrestricted multigene recombineering for multiprotein complex production [My Copy] Nature Methods, Vol. 6, No. 6. (03 May 2009), pp. 447-450. by Christoph Bieniossek, Yan Nie, Daniel Frey, et al.Natacha Olieric, Christiane Schaffitzel, Ian Collinson, Christophe Romier, Philipp Berger, Timothy J. Richmond, Michel O. Steinmetz, Imre Berger posted to complex protein by zwang on 2009-06-04 05:24:52 as along with 3 people dbikard austin guhjy

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protein	358
influenza	248
structure	197
evolution	189
interaction	182
virus	155
network	132
prediction	109
rna	89
genome	77
domain	60
yeast	60
sequence	59
gene	54
complex	47
phylogeny	43
transcription	34
rnasep	33
co-evolution	32
avian	30
binding	30
dynamics	29
polymerase	29
mutation	28
folding	27
genome-wide	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	21
alignment	20
clustering	19
modeling	19
regulatory	19
site	19
human	18
antibody	17
eukaryota	17
regulation	16
function	15
genetic	15
design	14
fluorescent	14
drug	13
residue	13
synthetic	13
bayesian	12
metabolism	12
epitope	11
immunity	11
interface	10
microarray	10
pathway	10
promoter	10
algorithm	9
massspectrometry	9
diversity	8
ecoli	8
hiv	8
peptide	8
phenotype	8
bioinformatics	7
computational	7
invivo	7
replication	7
review	7
vaccine	7
y2h	7
chromatin	6
hostspecialization	6
specy	6
system	6
systematic	6
annotation	5
disease	5
fret	5
geneexpression	5
homology	5
insilico	5
mammal	5
nmr	5
phosphorylation	5
prokaryote	5
selection	5
substitution	5
subunit	5
swine	5
visualization	5
antigen	4
architecture	4
assembly	4
divergence	4
em	4
experiment	4
genetics	4
hierarchical	4
histone	4
localization	4
membrane	4
microrna	4
module	4
ncrna	4
nuclear	4
ortholog	4
proteomics	4
purification	4
rule	4
surface	4
svm	4
archaea	3
biofuel	3
cancer	3
cellcycle	3
coil	3
contact	3
deletion	3
element	3
genefamily	3
immune	3
m2	3
methylation	3
np	3
profile	3
protocol	3
reassortment	3
research	3
science	3
secondary	3
simulation	3
translation	3
ysd	3
accuracy	2
bifc	2
bootstrap	2
bret	2
chaperone	2
chromosome	2
cloning	2
comparativegenomics	2
cooccurrence	2
database	2
docking	2
endogenous	2
epistasis	2
fitness	2
homologymodeling	2
hub	2
information-theory	2
inhibition	2
likelihood	2
linker	2
mathematic	2
mhc	2
mi	2
molecularrecognition	2
mp	2
neural	2
ns	2
phylogeography	2
positiveselection	2
presentation	2
primer	2
ribozyme	2
singlemolecule	2
stability	2
target	2
technique	2
viability	2
web	2
bsi	1
clade	1
coevolution	1
co-extinction	1
collaboration	1
compensatory	1
confidence	1
counter	1
cpg-island	1
culture	1
degradation	1
detection	1
differentiation	1
duplication	1
ecology	1
emulation	1
enzyme	1
epigenetics	1
fuck	1
geneontology	1
generegulation	1
hgt	1
hla	1
hmm	1
immunohistochemistry	1
inhibitor	1
integration	1
invitro	1
lgt	1
magnetic	1
marker	1
model	1
morphological	1
mrp	1
nanopore	1
nanoscale	1
nature	1
neoselection	1
noise	1
oligonucleotide	1
oral	1
pathobiology	1
pca	1
plant	1
positiveepistasis	1
protection	1
qtl	1
reliability	1
reverse-engineering	1
ribosome	1
sampling	1
sequencing	1
similarity	1
singlecell	1
sites	1
social	1
speciation	1
statistical	1
strain	1
substrate_recognition	1
tag	1
tap	1
terminator	1
text-mining	1
theory	1
threading	1
tissue	1
tlr	1
transmembrane	1
trna	1
vesicle	1
video	1

zwang's protein [at least 200 articles] Export

zwang's tags