zwang's transcription [34 articles] Export

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	Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture [My Copy] Molecular Systems Biology, Vol. 5 (18 August 2009) by Raja Jothi, S. Balaji, Arthur Wuster, et al.Joshua A. Grochow, Jorg Gsponer, Teresa M. Przytycka, L. Aravind, Madan M. Babu posted to transcription network genome by zwang on 2009-10-09 08:00:41 as along with 12 people ashishanand apocapoc brianb dswan sjcockell fenghezi rdiaz megraw poirel TRHvidsten jjray biomcgary
	Genetic trans-Complementation Establishes a New Model for Influenza Virus RNA Transcription and Replication. [My Copy] PLoS pathogens, Vol. 5, No. 5. (May 2009) by N. Jorba, R. Coloma, J. Ortín posted to influenza replication rna transcription virus by zwang on 2009-06-01 02:53:16 as
	Glucose regulates transcription in yeast through a network of signaling pathways [My Copy] Mol Syst Biol, Vol. 5 (17 February 2009) by Shadia Zaman, Soyeon I. Lippman, Lisa Schneper, Noam Slonim, James R. Broach posted to network transcription yeast by zwang on 2009-05-07 04:51:04 as along with 4 people michaelbarton biomcgary renatomilani arne
	Energy-dependent fitness: A quantitative model for the evolution of yeast transcription factor binding sites [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 34. (26 August 2008), pp. 12376-12381. by Ville Mustonen, Justin Kinney, Curtis G. Callan, Michael LÃ¤ssig posted to binding evolution site transcription by zwang on 2008-08-27 14:31:44 as along with 5 people lusk marck emptyhb bmajoros bpcusack
	A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. [My Copy] Science (New York, N.Y.), Vol. 321, No. 5891. (15 August 2008), pp. 956-960. by M. Sultan, M. H. Schulz, H. Richard, et al.A. Magen, A. Klingenhoff, M. Scherf, M. Seifert, T. Borodina, A. Soldatov, D. Parkhomchuk, D. Schmidt, S. O'Keeffe, S. Haas, M. Vingron, H. Lehrach, M. L. Yaspo posted to gene sequence transcription by zwang on 2008-08-16 07:32:25 as along with 28 people and 2 groups hzoltan zufar eszczurek n00c dna inesdesantiago ilyashl TRHvidsten poschm bertelsen ivanek guhjy wutongbin jfr raistrick gracio xingxu psique oelemento Ema reyez caseybrown kjglennie dh0000 GeeSharpMinor balicea djkt ArtemPankin BenosLab Khavkin's lab
	Gene Regulation by Transcription Factors and MicroRNAs [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1785-1786. by Oliver Hobert posted to microrna regulation transcription by zwang on 2008-04-07 15:58:07 as along with 14 people and 1 group tonamswish danaiancu megraw valeriehilgers guhjy inesdesantiago jfr ealloza biomcgary heliopais emptyhb maralena bootsy siebert microRNA
	PLoS Computational Biology: A Semi-Supervised Method for Predicting Transcription Factor–Gene Interactions in Escherichia coli [My Copy] posted to eukaryota interaction transcription by zwang on 2008-03-30 06:33:45 as
	Transcription Factor Substitution during the Evolution of Fungal Ribosome Regulation [My Copy] Molecular Cell, Vol. 29, No. 5. (14 March 2008), pp. 552-562. by Herve Hogues, Hugo Lavoie, Adnane Sellam, et al.Maria Mangos, Terry Roemer, Enrico Purisima, Andre Nantel, Malcolm Whiteway posted to evolution regulation substitution transcription by zwang on 2008-03-20 13:26:22 as along with 1 person and 1 group stajich Mycology
	Experimental Characterization of Cis-Acting Elements Important for Translation and Transcription in Halophilic Archaea [My Copy] PLoS Genetics, Vol. 3, No. 12. (1 December 2007), e229. by Mariam Brenneis, Oliver Hering, Christian Lange, Jörg Soppa posted to archaea element experiment transcription translation by zwang on 2008-01-02 10:45:35 as
	A Nucleosome-Guided Map of Transcription Factor Binding Sites in Yeast [My Copy] PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e215. by Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink posted to binding site transcription yeast by zwang on 2007-12-10 04:30:58 as along with 5 people TRHvidsten aalibes nklee maximilianh megraw
	Evolutionary models for formation of network motifs and modularity in the Saccharomyces transcription factor network. [My Copy] PLoS Comput Biol, Vol. 3, No. 10. (26 October 2007), pp. 1993-2002. by J. J. Ward, J. M. Thornton posted to evolution modeling motif network transcription yeast by zwang on 2007-11-20 08:52:20 as along with 2 people cabbagezs grottenolm
	Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes [My Copy] PLoS Comput Biol, Vol. 3, No. 9. (7 September 2007), e175. by Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin posted to bacterial gene ortholog regulation transcription by zwang on 2007-11-02 08:03:07 as along with 11 people and 3 groups Jporci druvus treangen carlk operon dpollard dquest djkt cabbagezs heliopais blobbybirdman EisenLab cis-regulatory-evolution Myxo group
	Functional Architecture and Evolution of Transcriptional Elements That Drive Gene Coexpression [My Copy] Science, Vol. 317, No. 5844. (14 September 2007), pp. 1557-1560. by Christopher D. Brown, David S. Johnson, Arend Sidow posted to evolution expression gene transcription by zwang on 2007-09-18 06:18:00 as along with 10 people and 2 groups pradiptaray dpollard djkt joepickrell Garamonfok Stew mimulus_99 maximilianh cisevol emptyhb EisenLab cis-regulatory-evolution
	Global and Local Architecture of the Mammalian microRNA–Transcription Factor Regulatory Network [My Copy] PLoS Comput Biol, Vol. 3, No. 7. (13 July 2007), e131. by Reut Shalgi, Daniel Lieber, Moshe Oren, Yitzhak Pilpel posted to mammal microrna network regulatory transcription by zwang on 2007-08-29 02:29:18 as along with 16 people and 2 groups tonamswish myzhang daforerog mtagaya jfr andersbj rdiaz sebastien_vigneau ealloza bootsy cabbagezs rahulthadani heliopais ale maralena kevinemamy Bioinformatics microRNA
	Structural basis for transcription elongation by bacterial RNA polymerase [My Copy] Nature (20 June 2007) by Dmitry G. Vassylyev, Marina N. Vassylyeva, Anna Perederina, Tahir H. Tahirov, Irina Artsimovitch posted to bacterial rna structure transcription by zwang on 2007-08-28 03:59:15 as along with 2 people margaritis Jporci
	How gene order is influenced by the biophysics of transcription regulation [My Copy] PNAS (20 August 2007), 0700672104. by Grigory Kolesov, Zeba Wunderlich, Olga N. Laikova, Mikhail S. Gelfand, Leonid A. Mirny posted to gene regulation transcription by zwang on 2007-08-27 09:01:56 as along with 6 people madhadron margaritis Jporci maximilianh lambda jjray
	An Approach to Predict Transcription Factor DNA Binding Site Specificity Based upon Gene and Transcription Factor Functional Categorization [My Copy] Bioinformatics (10 July 2007), btm348. by Ziliang Qian, Lingyi Lu, Xiaojun Liu, Yu-Dong Cai, Yixue Li posted to binding dna gene prediction site transcription by zwang on 2007-08-15 03:43:07 as along with 2 people druvus xili03
	Systematic Analysis of the Protein Interaction Network for the Human Transcription Machinery Reveals the Identity of the 7SK Capping Enzyme [My Copy] Molecular Cell, Vol. 27, No. 2. (20 July 2007), pp. 262-274. by Celia Jeronimo, Diane Forget, Annie Bouchard, et al.Qintong Li, Gordon Chua, Christian Poitras, Cynthia Therien, Dominique Bergeron, Sylvie Bourassa, Jack Greenblatt, Benoit Chabot, Guy G. Poirier, Timothy R. Hughes, Mathieu Blanchette, David H. Price, Benoit Coulombe posted to interaction network protein systematic transcription by zwang on 2007-08-15 03:36:31 as
	Divergence of Transcription Factor Binding Sites Across Related Yeast Species [My Copy] Science, Vol. 317, No. 5839. (10 August 2007), pp. 815-819. by Anthony R. Borneman, Tara A. Gianoulis, Zhengdong D. Zhang, et al.Haiyuan Yu, Joel Rozowsky, Michael R. Seringhaus, Lu Y. Wang, Mark Gerstein, Michael Snyder posted to binding divergence site transcription yeast by zwang on 2007-08-13 07:21:50 as along with 22 people and 2 groups pradiptaray gdb fenghezi dbensasson caseybrown bryankr aalibes chad_davis dpollard djkt mikaelhuss lusk cjeans sujaikumar GustavoLacerda Jporci maximilianh cisevol njcitulike emptyhb nklee anka EisenLab cis-regulatory-evolution
	A Hierarchical Network of Transcription Factors Governs Androgen Receptor-Dependent Prostate Cancer Growth. [My Copy] posted to hierarchical network transcription by zwang on 2007-08-09 15:30:31 as
	Recombinant RNA expression [My Copy] Nature Methods, Vol. 4, No. 7., pp. 547-548. by Christine M. Dunham, Graeme L. Conn posted to invivo protection rna transcription by zwang on 2007-06-30 11:44:40 as
	Genome-wide transcription and the implications for genomic organization [My Copy] Nature Reviews Genetics, Vol. 8, No. 6. (08 May 2007), pp. 413-423. by Philipp Kapranov, Aarron T. Willingham, Thomas R. Gingeras posted to genome-wide review transcription by zwang on 2007-06-14 05:23:08 as along with 23 people and 5 groups Jporci bartjacobse bertelsen daforerog coela hagechouchin443 emptyhb pengchy guhjy balicea xico dchughes kengg sebastien_vigneau ajgentles Ema asddd hanansh antonkratz vietanh0 maximilianh GeeSharpMinor inesdesantiago Bioinformatics WetBiology G4ID Plantandetc Genetics-of-Gambling
	Frequent gain and loss of functional transcription factor binding sites. [My Copy] PLoS computational biology, Vol. 3, No. 5. (1 May 2007), e99. by Scott W. Doniger, Justin C. Fay posted to binding evolution site transcription by zwang on 2007-05-26 04:59:51 as along with 12 people and 2 groups roys fenghezi lusk JustinCrocker pradiptaray brant dpollard sebastien_vigneau maximilianh cisevol xili03 emptyhb EisenLab cis-regulatory-evolution
	Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites [My Copy] PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e90. by Timothy E. Reddy, Charles Delisi, Boris E. Shakhnovich posted to binding prediction transcription by zwang on 2007-05-12 10:40:13 as
	High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons. [My Copy] Nat Biotechnol (1 April 2007) by Patrick T T. McGrath, Honglak Lee, Li Zhang, et al.Antonio A A. Iniesta, Alison K K. Hottes, Meng How H. Tan, Nathan J J. Hillson, Ping Hu, Lucy Shapiro, Harley H H. McAdams posted to motif promoter transcription by zwang on 2007-05-10 17:03:41 as along with 2 people idoerg aswin
	Genetic reconstruction of a functional transcriptional regulatory network. [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J J. Killion, Vishwanath R R. Iyer posted to genetic network regulation transcription by zwang on 2007-04-29 08:57:29 as along with 15 people and 6 groups sergiun TheresaNiederberger akraemer behindtherabbit ptrobajo dpollard xico nickluscombe lizabeth dejori xingxu naegele czeller mapplab siebert Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper
	Genome-wide transcriptional plasticity underlies cellular adaptation to novel challenge [My Copy] Mol Syst Biol, Vol. 3 (24 April 2007) by Shay Stern, Tali Dror, Elad Stolovicki, Naama Brenner, Erez Braun posted to genome-wide transcription by zwang on 2007-04-24 16:59:02 as along with 3 people Retchless kynn bpcusack
	Inferring condition-specific transcription factor function from DNA binding and gene expression data [My Copy] Mol Syst Biol, Vol. 3 (17 April 2007) by Rachel P. Mccord, Michael F. Berger, Anthony A. Philippakis, Martha L. Bulyk posted to dna geneexpression transcription by zwang on 2007-04-17 17:26:26 as along with 1 person oelemento
	A genome-scale computational study of the interplay between transcriptional regulation and metabolism [My Copy] Mol Syst Biol, Vol. 3 (17 April 2007) by Tomer Shlomi, Yariv Eisenberg, Roded Sharan, Eytan Ruppin posted to genome-wide regulation transcription by zwang on 2007-04-17 17:25:33 as along with 1 person dylan77
	Transcriptional Regulation by Competing Transcription Factor Modules [My Copy] PLoS Computational Biology, Vol. 2, No. 12. (1 December 2006), e164. by Rutger Hermsen, Sander Tans, Ten posted to regulation transcription by zwang on 2007-04-16 14:10:54 as along with 3 people wnpx nirfriedman nklee
	Nonlinear differential equation model for quantification of transcriptional regulation applied to microarray data of Saccharomyces cerevisiae [My Copy] Nucleic Acids Research, Vol. 35, No. 1. (January 2007), pp. 279-287. by Vu, Tra Thi, Vohradsky, Jiri posted to microarray regulation transcription yeast by zwang on 2007-04-16 13:48:37 as along with 1 person lillo80
	Transcriptional regulation of protein complexes within and across species. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 4. (23 January 2007), pp. 1283-1288. by K. Tan, T. Shlomi, H. Feizi, T. Ideker, R. Sharan posted to complex protein specy transcription by zwang on 2007-04-16 13:12:52 as along with 6 people and 2 groups HawkinsJohnC kaarsinogen icases nickluscombe dylan77 carlk EBI-regulation TNT
	Hierarchy and feedback in the evolution of the Escherichia coli transcription network [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 13. (27 March 2007), pp. 5516-5520. by M. Cosentino Lagomarsino, P. Jona, B. Bassetti, H. Isambert posted to ecoli evolution network transcription by zwang on 2007-03-30 08:33:29 as along with 4 people arjun_citeulike cjeans dquest jjray
	A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription [My Copy] Nature Genetics, Vol. 39, No. 3. (26 February 2007), pp. 303-309. by Israel Steinfeld, Ron Shamir, Martin Kupiec posted to chromatin genome-wide transcription yeast by zwang on 2007-03-19 13:32:22 as along with 1 person hplatero

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protein	358
influenza	248
structure	197
evolution	189
interaction	182
virus	155
network	132
prediction	109
rna	89
genome	77
domain	60
yeast	60
sequence	59
gene	54
complex	47
phylogeny	43
transcription	34
rnasep	33
co-evolution	32
avian	30
binding	30
dynamics	29
polymerase	29
mutation	28
folding	27
genome-wide	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	21
alignment	20
clustering	19
modeling	19
regulatory	19
site	19
human	18
antibody	17
eukaryota	17
regulation	16
function	15
genetic	15
design	14
fluorescent	14
drug	13
residue	13
synthetic	13
bayesian	12
metabolism	12
epitope	11
immunity	11
interface	10
microarray	10
pathway	10
promoter	10
algorithm	9
massspectrometry	9
diversity	8
ecoli	8
hiv	8
peptide	8
phenotype	8
bioinformatics	7
computational	7
invivo	7
replication	7
review	7
vaccine	7
y2h	7
chromatin	6
hostspecialization	6
specy	6
system	6
systematic	6
annotation	5
disease	5
fret	5
geneexpression	5
homology	5
insilico	5
mammal	5
nmr	5
phosphorylation	5
prokaryote	5
selection	5
substitution	5
subunit	5
swine	5
visualization	5
antigen	4
architecture	4
assembly	4
divergence	4
em	4
experiment	4
genetics	4
hierarchical	4
histone	4
localization	4
membrane	4
microrna	4
module	4
ncrna	4
nuclear	4
ortholog	4
proteomics	4
purification	4
rule	4
surface	4
svm	4
archaea	3
biofuel	3
cancer	3
cellcycle	3
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contact	3
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element	3
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ysd	3
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chromosome	2
cloning	2
comparativegenomics	2
cooccurrence	2
database	2
docking	2
endogenous	2
epistasis	2
fitness	2
homologymodeling	2
hub	2
information-theory	2
inhibition	2
likelihood	2
linker	2
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mi	2
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mp	2
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ns	2
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web	2
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text-mining	1
theory	1
threading	1
tissue	1
tlr	1
transmembrane	1
trna	1
vesicle	1
video	1

zwang's transcription [34 articles] Export

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