zwang's watchlist [more than 800 articles] Export

Recent papers matching zwang's watchlist criteria

	Genetic Variation and Recent Positive Selection in Worldwide Human Populations: Evidence from Nearly 1 Million SNPs [My Copy] PLoS ONE, Vol. 4, No. 11. (18 November 2009), e7888. by David López Herráez, Marc Bauchet, Kun Tang, et al.Christoph Theunert, Irina Pugach, Jing Li, Madhusudan R. Nandineni, Arnd Gross, Markus Scholz, Mark Stoneking posted to snp by phoenixzxl on 2009-11-18 01:05:49 as
	GExplore: a web server for integrated queries of protein domains, gene expression and mutant phenotypes [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 529. by Harald Hutter, Man P. Ng, Nansheng Chen posted to data_integration by phoenixzxl on 2009-11-17 01:09:12 as
	Co-expression Networks: Graph Properties and Topological Comparisons [My Copy] Bioinformatics (12 November 2009), btp632. by Ramon Xulvi-Brunet, Hongzhe Li posted to network_analysis gene_expression by phoenixzxl on 2009-11-13 01:54:31 as along with 2 people kshameer neils
	Edgetic perturbation models of human inherited disorders [My Copy] Molecular Systems Biology, Vol. 5 (03 November 2009) by Quan Zhong, Nicolas Simonis, Qian-Ru Li, et al.Benoit Charloteaux, Fabien Heuze, Niels Klitgord, Stanley Tam, Haiyuan Yu, Kavitha Venkatesan, Danny Mou, Venus Swearingen, Muhammed A. Yildirim, Han Yan, Amelie Dricot, David Szeto, Chenwei Lin, Tong Hao, Changyu Fan, Stuart Milstein, Denis Dupuy, Robert Brasseur, David E. Hill, Michael E. Cusick, Marc Vidal posted to system_biology disease_drug by phoenixzxl on 2009-11-10 01:53:55 as along with 5 people mingzhi tmmurali roys pedrobeltrao brianb
	Accurate molecular classification of cancer using simple rules [My Copy] BMC Medical Genomics, Vol. 2, No. 1. (2009), 64. by Xiaosheng Wang, Osamu Gotoh posted to machine_learning disease_drug by phoenixzxl on 2009-11-04 01:33:11 as along with 1 person ptrobajo
	Genome-wide association studies: progress and potential for drug discovery and development [My Copy] Nature Reviews Drug Discovery, Vol. 7, No. 3. (01 February 2008), pp. 221-230. by Stephen F. Kingsmore, Ingrid E. Lindquist, Joann Mudge, Damian D. Gessler, William D. Beavis posted to review genome disease_drug by phoenixzxl on 2009-10-28 01:19:48 as along with 6 people and 1 group ubcg08l ajaymalik guhjy massivemayhem psique Petersarkies parkinson's disease references
	phyloXML: XML for evolutionary biology and comparative genomics [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 356. by Mira Han, Christian Zmasek posted to intereting evolution by phoenixzxl on 2009-10-28 01:07:31 as along with 6 people and 1 group operon cisevol kshameer Geknitics druvus cmzmasek BergmanLab
	Costly punishment does not always increase cooperation [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 41. (13 October 2009), pp. 17448-17451. by Jia-Jia Wu, Bo-Yu Zhang, Zhen-Xing Zhou, et al.Qiao-Qiao He, Xiu-Deng Zheng, Ross Cressman, Yi Tao posted to intereting by phoenixzxl on 2009-10-22 07:18:44 as
	How to identify essential genes from molecular networks? [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 102. by Gabriel D. Rio, Dirk Koschutzki, Gerardo Coello posted to network_inference by phoenixzxl on 2009-10-16 04:16:19 as along with 7 people operon tmmurali kshameer ptrobajo renatomilani druvus daforerog
	Harnessing gene expression to identify the genetic basis of drug resistance [My Copy] Molecular Systems Biology, Vol. 5 (13 October 2009) by Bo-Juen Chen, Helen C. Causton, Denesy Mancenido, Noel L. Goddard, Ethan O. Perlstein, Dana Pe'er posted to gene_expression disease_drug data_integration by phoenixzxl on 2009-10-15 02:46:02 as along with 4 people dswan ashishanand ptrobajo frohike
	Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences [My Copy] Molecular Systems Biology, Vol. 5 (13 October 2009) by Iris Bahir, Menachem Fromer, Yosef Prat, Michal Linial posted to infect by phoenixzxl on 2009-10-15 02:44:54 as along with 1 person michaelbarton
	A coiled-coil motif that sequesters ions to the hydrophobic core [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 40. (6 October 2009), pp. 16950-16955. by Marcus D. Hartmann, Oswin Ridderbusch, Kornelius Zeth, et al.Reinhard Albrecht, Oli Testa, Derek N. Woolfson, Guido Sauer, Stanislaw Dunin-Horkawicz, Andrei N. Lupas, Birte H. Alvarez posted to coiled_coil by phoenixzxl on 2009-10-09 05:12:13 as along with 2 people paulschlesinger kevinchannon
	The interwinding nature of protein-protein interfaces and its implication for protein complex formation [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3108-3113. by Kei Yura, Steven Hayward posted to prediction_interface complex by phoenixzxl on 2009-09-30 02:18:32 as along with 4 people kshameer dfdong higueruelo tprpip
	Global alignment of multiple protein interaction networks with application to functional orthology detection [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 35. (2 September 2008), pp. 12763-12768. by Rohit Singh, Jinbo Xu, Bonnie Berger posted to network_ppi network_analysis by phoenixzxl on 2009-09-29 08:32:23 as along with 7 people nliu82 ptrobajo icq242500260 dakelley renatomilani bpcusack roys
	Simultaneous inference of biological networks of multiple species from genome-wide data and evolutionary information: a semi-supervised approach [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2962-2968. by Hisashi Kashima, Yoshihiro Yamanishi, Tsuyoshi Kato, Masashi Sugiyama, Koji Tsuda posted to network_inference data_integration by phoenixzxl on 2009-09-25 15:59:34 as along with 3 people and 1 group jperkins roys druvus Orengo Group Journal Picks
	How to infer gene networks from expression profiles [My Copy] Molecular Systems Biology, Vol. 3 (13 February 2007) by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo posted to review network_inference bayesian by phoenixzxl on 2009-09-25 08:29:29 as along with 37 people and 3 groups beete tonamswish zufar nicholasflann icq242500260 guhjy Zephyrus antonkratz bertelsen isimpson daforerog poirel agonzale roys Neeperando APRegier rdiaz klo Borelli ggallone ptrobajo druvus cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali Jarman Lab EBI-regulation Plantandetc
	Modeling system states in liver cells: Survival, apoptosis and their modifications in response to viral infection [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 97. by Nicole Philippi, Dorothee Walter, Rebekka Schlatter, et al.Karine Ferreira, Michael Ederer, Oliver Sawodny, Jens Timmer, Christoph Borner, Thomas Dandekar posted to system_biology simulation infect by phoenixzxl on 2009-09-23 02:20:38 as
	Global networks of functional coupling in eukaryotes from comprehensive data integration [My Copy] Genome Research, Vol. 19, No. 6. (25 June 2009), pp. 1107-1116. by Andrey Alexeyenko, Erik L. L. Sonnhammer posted to data_integration bayesian by phoenixzxl on 2009-09-21 07:44:11 as along with 7 people and 1 group ptrobajo kshameer rdiaz guhjy provero roys grahamc ParkinsonLab_at_MaRS
	Statistical tests for differential expression in cDNA microarray experiments [My Copy] Genome Biology, Vol. 4, No. 4. (2003), 210. by Xiangqin Cui, Gary Churchill posted to statistical review by phoenixzxl on 2009-09-18 02:34:40 as along with 6 people stsaft pengchy egreenfest heliopais waszak shikin
	Bioinformatics construction of the human cell surfaceome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 39. (29 September 2009), pp. 16752-16757. by J. P. da Cunha, P. A. Galante, J. E. de Souza, et al.R. F. de Souza, P. M. Carvalho, D. T. Ohara, R. P. Moura, S. M. Oba-Shinja, S. K. Marie, W. A. Silva, R. O. Perez, B. Stransky, M. Pieprzyk, J. Moore, O. Caballero, J. Gama-Rodrigues, A. Habr-Gama, W. P. Kuo, A. J. Simpson, A. A. Camargo, Lloyd J. Old, S. J. de Souza posted to insight data_integration by phoenixzxl on 2009-09-16 02:56:39 as along with 3 people frohike tonamswish renatomilani
	A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae) [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 14. (8 July 2003), pp. 8348-8353. by Olga G. Troyanskaya, Kara Dolinski, Art B. Owen, Russ B. Altman, David Botstein posted to prediction_function data_integration bayesian by phoenixzxl on 2009-09-15 04:17:37 as along with 21 people and 2 groups ruichu bertelsen bresiva BioGeek serak dragonrez okarsligil lfriedl balajis eckart_bindewald eweaver luispedro opheliav wnpx nedwards Evangelia kallberg isimpson carlk srp33 frohike kdl Bioinformatics
	Inferring Cellular Networks Using Probabilistic Graphical Models [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 799-805. by Nir Friedman posted to review network_inference cns bayesian by phoenixzxl on 2009-09-15 04:16:00 as along with 24 people and 2 groups antonkratz jxl abhishek_tiwari richardbickerton ruichu ggallone bertelsen ldfu ujh lfriedl opheliav ryang wnpx nirfriedman neveaire koller helsley dimatura edwardmorrissey vietanh0 Yumyai srp33 saman_vp jo_davies Jarman Lab kdl
	Causal Protein-Signaling Networks Derived from Multiparameter Single-Cell Data [My Copy] Science, Vol. 308, No. 5721. (22 April 2005), pp. 523-529. by Karen Sachs, Omar Perez, Dana Pe'er, Douglas A. Lauffenburger, Garry P. Nolan posted to network_inference bayesian by phoenixzxl on 2009-09-15 04:05:22 as along with 23 people and 1 group pkm sameersoi abhishek_tiwari poirel roys frohike aviad_work czeller emptyhb kentsis kaarsinogen balajis rand_bayes ryang wnpx os252 j3xucite noano koller jhatrimatri cdppublications lp2 saman_vp CDP
	Seasonal transmission potential and activity peaks of the new influenza A(H1N1): a Monte Carlo likelihood analysis based on human mobility [My Copy] BMC Medicine, Vol. 7, No. 1. (14 Sep 2009), 45. by Duygu Balcan, Hao Hu, Bruno Goncalves, et al.Paolo Bajardi, Chiara Poletto, Jose J. Ramasco, Daniela Paolotti, Nicola Perra, Michele Tizzoni, Wouter Van den Broeck, Vittoria Colizza, Alessandro Vespignani posted to statistical influenza by phoenixzxl on 2009-09-14 08:43:44 as along with 2 people marinari simdoc
	CCHMM_PROF: a HMM-based Coiled-Coil Predictor with Evolutionary Information [My Copy] Bioinformatics (10 September 2009), btp539. by Lisa Bartoli, Piero Fariselli, Anders Krogh, Rita Casadio posted to probability coiled_coil by phoenixzxl on 2009-09-11 01:59:27 as
	RRW: repeated random walks on genome-scale protein networks for local cluster discovery [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (9 September 2009), 283. by Kathy Macropol, Tolga Can, Ambuj Singh posted to network_ppi network_analysis by phoenixzxl on 2009-09-10 01:49:30 as along with 3 people and 1 group sillitoe barriot poirel Orengo Group Journal Picks
	Regression Applied to Protein Binding Site Prediction and Comparison with Classification [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (03 September 2009), 276. by Joachim Giard, Jerome Ambroise, Jean L. Gala, Benoit Macq posted to prediction_interface machine_learning by phoenixzxl on 2009-09-07 03:11:26 as along with 1 person jinghu_fandm
	Chemical approaches to synthetic biology [My Copy] Current Opinion in Biotechnology (03 September 2009) by Cristiano Chiarabelli, Pasquale Stano, Pier L. Luisi posted to synthetic_biology review by phoenixzxl on 2009-09-07 02:27:30 as along with 1 person abhishek_tiwari
	The evolution of information suppression in communicating robots with conflicting interests [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 37. (15 September 2009), pp. 15786-15790. by Sara Mitri, Dario Floreano, Laurent Keller posted to intereting co-evolution by phoenixzxl on 2009-09-04 07:30:26 as along with 2 people vgauthier rdiaz
	Analyzing biological network parameters with CentiScaPe [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2857-2859. by Giovanni Scardoni, Michele Petterlini, Carlo Laudanna posted to soft network_analysis by phoenixzxl on 2009-09-04 01:57:42 as along with 5 people ess30 colmryan operon kshameer dolchan
	Context-Specific Target Definition in Influenza A Virus Hemagglutinin-Glycan Receptor Interactions [My Copy] Vol. 16, No. 8. (28 August 2009), pp. 803-814. by Zachary Shriver, Rahul Raman, Karthik Viswanathan, Ram Sasisekharan posted to review ha glycan by phoenixzxl on 2009-09-02 08:51:45 as
	BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC [My Copy] BMC Evolutionary Biology, Vol. 9, No. 1. (28 August 2009), 217. by Rahul Satija, Adam Novak, Istvan Miklos, Rune Lyngso, Jotun Hein posted to sequence_alignment mcmc bayesian by phoenixzxl on 2009-09-02 02:23:45 as along with 3 people and 2 groups cmzmasek cisevol djkt cis-regulatory-evolution BergmanLab
	Correlating gene and protein expression data using Correlated Factor Analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (01 September 2009), 272. by Chuen S. Tan, Agus Salim, Alexander Ploner, Janne Lehtio, Kee S. Chia, Yudi Pawitan posted to simulation gene_expression by phoenixzxl on 2009-09-02 01:56:41 as along with 4 people mayercd rdiaz ptrobajo coffeerv
	A Quick Guide to Teaching R Programming to Computational Biology Students [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (28 August 2009), e1000482. by Stephen J. Eglen posted to tutorial r by phoenixzxl on 2009-08-31 07:23:03 as along with 61 people and 4 groups kaliczp maren sobolevnrm ltitodem zchen75 artaban421 natstreet jasonn tomhebbron psique Stew eshirdel guhjy polivares ajw fishtank diamantis fastjoe23 kshameer daveGerrard hrogers JoeBanks cisevol srijit hwright Ayest VGreiff welliegirl asadrahman rdiaz ptrobajo heliopais coffeerv Vincent_Rouilly marekrud tnhh barry ansobol Zephyrus walshtp bertelsen fgibson pkonings Borelli klauso dlizcano dswan skembel djkt jclau lwaldron timhubbard AJCann thegoose dullhunk brianb neils silberbauer daforerog ppgardne druvus Bioinformatics - CRUK BergmanLab eLearning in Leicester Journal picks
	The human protein coevolution network. [My Copy] Genome research, Vol. 19, No. 10. (20 October 2009), pp. 1861-1871. by Elisabeth R. Tillier, Robert L. Charlebois posted to network_evolution co-evolution by phoenixzxl on 2009-08-28 08:06:33 as along with 7 people dfdong Garamonfok venancio jperkins TRHvidsten djkt tmmurali
	Feature selection and transduction for prediction of molecular bioactivity for drug design [My Copy] Bioinformatics, Vol. 19, No. 6. (12 April 2003), pp. 764-771. by Jason Weston, Fernando Perez-Cruz, Olivier Bousquet, Olivier Chapelle, Andre Elisseeff, Bernhard Scholkopf posted to machine_learning disease_drug by phoenixzxl on 2009-08-27 08:09:09 as along with 2 people bioinfo kallberg
	Bioinformatics models for predicting antigenic variants of influenza A/H3N2 virus [My Copy] Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 505-512. by Yu-Chieh Liao, Min-Shi Lee, Chin-Yu Ko, Chao A. Hsiung posted to machine_learning influenza evolution by phoenixzxl on 2009-08-27 07:48:04 as along with 1 person friendpine
	Computational prediction of host-pathogen protein protein interactions [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i159-166. by Matthew D. Dyer, T. M. Murali, Bruno W. Sobral posted to prediction_ppi by phoenixzxl on 2009-08-25 09:25:05 as along with 6 people and 1 group kshameer behindtherabbit operon GustavoLacerda carlk cerca Bioinformatics
	Assessing the druggability of protein-protein interactions by a supervised machine-learning method [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (25 August 2009), 263. by Nobuyoshi Sugaya, Kazuyoshi Ikeda posted to svm prediction_ppi machine_learning disease_drug by phoenixzxl on 2009-08-25 03:46:08 as along with 2 people iris_2001 higueruelo
	A score matrix to reveal the hidden links in glycans [My Copy] Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1457-1463. by Kiyoko F. Aoki, Hiroshi Mamitsuka, Tatsuya Akutsu, Minoru Kanehisa posted to glycan by phoenixzxl on 2009-08-24 14:02:07 as
	KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains. [My Copy] Nucleic acids research, Vol. 32, No. Web Server issue. (1 July 2004), pp. W267-272. by Kiyoko F. Aoki, Atsuko Yamaguchi, Nobuhisa Ueda, et al.Tatsuya Akutsu, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa posted to glycan by phoenixzxl on 2009-08-24 14:00:34 as along with 1 person Cortel
	ScienceDirect - Cell : Defining Network Topologies that Can Achieve Biochemical Adaptation [My Copy] posted to network_dynamic network_analysis cns by phoenixzxl on 2009-08-24 13:24:04 as
	Evolutionary Interactions between N-Linked Glycosylation Sites in the HIV-1 Envelope [My Copy] PLoS Comput Biol, Vol. 3, No. 1. (19 January 2007), e11. by Art F. Y. Poon, Fraser I. Lewis, Sergei L. Pond, Simon D. W. Frost posted to infect glycan evolution bayesian by phoenixzxl on 2009-08-21 09:24:59 as
	Biosynthetic Potentials of Metabolites and Their Hierarchical Organization [My Copy] PLoS Comput Biol, Vol. 4, No. 4. (4 April 2008), e1000049. by Franziska Matthäus, Carlos Salazar, Oliver Ebenhöh posted to network_analysis by phoenixzxl on 2009-08-21 09:23:33 as
	A boosting approach to structure learning of graphs with and without prior knowledge [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2929-2936. by Shahzia Anjum, Arnaud Doucet, Chris C. Holmes posted to network_analysis by phoenixzxl on 2009-08-21 09:08:51 as along with 6 people hughitt1 tmmurali fastjoe23 TRHvidsten rdiaz frohike
	In vitro and in vivo characterization of new swine-origin H1N1 influenza viruses [My Copy] Nature, Vol. 460, No. 7258. (20 August 2009), pp. 1021-1025. by Yasushi Itoh, Kyoko Shinya, Maki Kiso, et al.Tokiko Watanabe, Yoshihiro Sakoda, Masato Hatta, Yukiko Muramoto, Daisuke Tamura, Yuko Sakai-Tagawa, Takeshi Noda, Saori Sakabe, Masaki Imai, Yasuko Hatta, Shinji Watanabe, Chengjun Li, Shinya Yamada, Ken Fujii, Shin Murakami, Hirotaka Imai, Satoshi Kakugawa, Mutsumi Ito, Ryo Takano, Kiyoko Iwatsuki-Horimoto, Masayuki Shimojima, Taisuke Horimoto, Hideo Goto, Kei Takahashi, Akiko Makino, Hirohito Ishigaki, Misako Nakayama, Masatoshi Okamatsu, Kazuo Takahashi, David Warshauer, Peter A. Shult, Reiko Saito, Hiroshi Suzuki, Yousuke Furuta, Makoto Yamashita, Keiko Mitamura, Kunio Nakano, Morio Nakamura, Rebecca Brockman-Schneider, Hiroshi Mitamura, Masahiko Yamazaki, Norio Sugaya, M. Suresh, Makoto Ozawa, Gabriele Neumann, James Gern, Hiroshi Kida, Kazumasa Ogasawara, Yoshihiro Kawaoka posted to influenza cns by phoenixzxl on 2009-08-20 03:59:23 as along with 1 person AlexBateman
	An Introduction to Bioinformatics for Glycomics Research [My Copy] PLoS Comput Biol, Vol. 4, No. 5. (30 May 2008), e1000075. by Kiyoko F. Aoki-Kinoshita posted to tutorial glycan by phoenixzxl on 2009-08-18 02:33:46 as along with 4 people Lombardo_7 giovenko dakelley guhjy
	Risk Maps for the Spread of Highly Pathogenic Avian Influenza in Poultry [My Copy] PLoS Comput Biol, Vol. 3, No. 4. (20 April 2007), e71. by Gert J. Boender, Thomas J. Hagenaars, Annemarie Bouma, et al.Gonnie Nodelijk, Armin R. W. Elbers, Mart C. M. de Jong, Michiel van Boven posted to probability influenza by phoenixzxl on 2009-08-18 02:33:02 as along with 2 people and 1 group guenno ucdmary Bioinformatics
	Support Vector Machines and Kernels for Computational Biology [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000173. by Asa Ben-Hur, Cheng S. Ong, Sören Sonnenburg, Bernhard Schölkopf, Gunnar Rätsch posted to tutorial svm by phoenixzxl on 2009-08-18 02:30:38 as along with 32 people and 3 groups guhjy VGreiff tomhebbron ucbcjbm thegoose Zephyrus winterschlaefer kshameer svozil mmartin jfr MarcoAlvarez sobolevnrm Yanno Scis0000002 srp33 GustavoLacerda nuin rdiaz dakelley rschulz Borelli taguchi kristina bayesian chad_davis mdstobbe tny giovenko markchen druvus GeeSharpMinor Bioinformatics baker-group VisionLab
	Rtreemix: an R package for estimating evolutionary pathways and genetic progression scores [My Copy] Bioinformatics, Vol. 24, No. 20. (15 October 2008), pp. 2391-2392. by Jasmina Bogojeska, Adrian Alexa, Andre Altmann, Thomas Lengauer, Jorg Rahnenfuhrer posted to soft r evolution by phoenixzxl on 2009-08-17 08:10:33 as along with 2 people rdiaz nuin

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protein	358
influenza	248
structure	197
evolution	189
interaction	182
virus	155
network	132
prediction	109
rna	89
genome	77
domain	60
yeast	60
sequence	59
gene	54
complex	47
phylogeny	43
transcription	34
rnasep	33
co-evolution	32
avian	30
binding	30
dynamics	29
polymerase	29
mutation	28
folding	27
genome-wide	27
bacterial	26
dna	26
expression	23
motif	23
hemagglutinin	21
alignment	20
clustering	19
modeling	19
regulatory	19
site	19
human	18
antibody	17
eukaryota	17
regulation	16
function	15
genetic	15
design	14
fluorescent	14
drug	13
residue	13
synthetic	13
bayesian	12
metabolism	12
epitope	11
immunity	11
interface	10
microarray	10
pathway	10
promoter	10
algorithm	9
massspectrometry	9
diversity	8
ecoli	8
hiv	8
peptide	8
phenotype	8
bioinformatics	7
computational	7
invivo	7
replication	7
review	7
vaccine	7
y2h	7
chromatin	6
hostspecialization	6
specy	6
system	6
systematic	6
annotation	5
disease	5
fret	5
geneexpression	5
homology	5
insilico	5
mammal	5
nmr	5
phosphorylation	5
prokaryote	5
selection	5
substitution	5
subunit	5
swine	5
visualization	5
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architecture	4
assembly	4
divergence	4
em	4
experiment	4
genetics	4
hierarchical	4
histone	4
localization	4
membrane	4
microrna	4
module	4
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nuclear	4
ortholog	4
proteomics	4
purification	4
rule	4
surface	4
svm	4
archaea	3
biofuel	3
cancer	3
cellcycle	3
coil	3
contact	3
deletion	3
element	3
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immune	3
m2	3
methylation	3
np	3
profile	3
protocol	3
reassortment	3
research	3
science	3
secondary	3
simulation	3
translation	3
ysd	3
accuracy	2
bifc	2
bootstrap	2
bret	2
chaperone	2
chromosome	2
cloning	2
comparativegenomics	2
cooccurrence	2
database	2
docking	2
endogenous	2
epistasis	2
fitness	2
homologymodeling	2
hub	2
information-theory	2
inhibition	2
likelihood	2
linker	2
mathematic	2
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mi	2
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mp	2
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ns	2
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presentation	2
primer	2
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stability	2
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viability	2
web	2
bsi	1
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counter	1
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emulation	1
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model	1
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mrp	1
nanopore	1
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nature	1
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noise	1
oligonucleotide	1
oral	1
pathobiology	1
pca	1
plant	1
positiveepistasis	1
protection	1
qtl	1
reliability	1
reverse-engineering	1
ribosome	1
sampling	1
sequencing	1
similarity	1
singlecell	1
sites	1
social	1
speciation	1
statistical	1
strain	1
substrate_recognition	1
tag	1
tap	1
terminator	1
text-mining	1
theory	1
threading	1
tissue	1
tlr	1
transmembrane	1
trna	1
vesicle	1
video	1

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